| Entry |
|
|---|
| Symbol |
PRPF40A
|
|---|
| Name |
(RefSeq) pre-mRNA-processing factor 40 homolog A isoform X6
|
|---|
| KO |
| K12821 | pre-mRNA-processing factor 40 |
|
|---|
| Organism |
aml Ailuropoda melanoleuca (giant panda)
|
|---|
| Pathway |
|
|---|
| Brite |
KEGG Orthology (KO) [BR:aml00001]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
100473479 (PRPF40A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:aml03041]
100473479 (PRPF40A)
Spliceosome [BR:aml03041]
Complex A
U1 snRNP components
U1 related factors
100473479 (PRPF40A)
Complex B
100473479 (PRPF40A)
|
|---|
| SSDB |
|
|---|
| Motif |
|
|---|
| Other DBs |
|
|---|
| LinkDB |
|
|---|
| Position |
2:complement(123716881..123776355)
|
|---|
| AA seq |
994 aa
MQATPTEAEAGGESPQSCVSAAHSDWTVGKPVSLLAPLIPPRSAGQPLTFGPSGRQPLRS
LLVGMCSGSGRRPSSLSPTMRPGTGAERGGLMMGHPGMHYAPMGMHPMGQRANMPPVPHG
MMPQMMPPMGGPPMGQMPGMMSSVMPGMMMSHMSQASMQPALPPGVNNMDVAAGTTSGAK
SMWTEHKSPDGRTYYYNTETKQSTWEKPDDLKTPAEQLLSKCPWKEYKSDSGKPYYYNSQ
TKESRWAKPKELEDLEGYQNTIVAGSLITKSNLHAMIKAEESSKQEECSTTSTAPVPTTE
IPTTMSTMAAAEAAAAVVAAAAAAAAAAAAANASASTSASNTVSGTGPVVPEPEVTSIVA
TVVDNENTVTISTEEQAQLTSTPAVQEQSMEVSSNTGEETAKQETVADFTPKKEEEESQP
AKKTYTWNTKEEAKQAFKELLKEKRVPSNASWEQAMKMIINDPRYSALAKLSEKKQAFNA
YKVQTEKEEKEEARSKYKEAKESFQRFLENHEKMTSTTRYKKAEQMFGEMEVWNAISERD
RLEIYEDVLFFLSKKEKEQAKQLRKRNWEALKNILDNMANVTYSTTWSEAQQYLMDNPTF
AEDEELQNMDKEDALICFEEHIRALEKEEEEEKQKSLLRERRRQRKNRESFQIFLDELHE
HGQLHSMSSWMELYPTISSDIRFTNMLGQPGSTALDLFKFYVEDLKARYHDEKKIIKDIL
KDKGFVVEVNTTFEDFVAIISSTKRSTTLDAGNIKLAFNSLLEKAEAREREREKEEARKM
KRKESAFKSMLKQATPPIELDAVWEDIRERFVKEPAFEDITLESERKRIFKDFMHVLEHE
CQHHHSKNKKHSKKSKKHHRKRSRSRSGSDSDDDDSHSKKKRQRSESRSASEHSSSAESE
RSYKKSKKHKKKSKKRRHKSDSPESDAEREKDKKEKDRESEKDRTRQRSESKHKSPKKKT
GKDSGNWDTSGSELSEGELEKRRRTLLEQLDDDQ |
|---|
| NT seq |
2985 nt +upstreamnt +downstreamnt
atgcaggcgacgccgactgaggctgaggctgggggcgaatcgccgcagagctgcgtgtcg
gcagcgcactctgattggacagtggggaagcctgtcagcttattggccccgctgattccg
ccccgtagcgcagggcagcctttaacctttggcccgagcgggcgccagccactcagatcg
cttcttgttggtatgtgtagcggcagtggccgccggccgagcagtctgagcccgacgatg
aggccggggacgggagcggaacgtggaggcctcatgatggggcaccctggcatgcattat
gccccaatgggaatgcaccctatgggtcagagagccaatatgcctcctgtacctcacgga
atgatgccgcaaatgatgccccctatgggagggccgccaatgggacaaatgcccggaatg
atgtcttccgtaatgcctggaatgatgatgtctcatatgtctcaggcttccatgcagcct
gccttaccgccaggagtaaataatatggatgtagcagcaggtacaacatctggtgcaaaa
tcaatgtggactgagcataagtcacctgatggaaggacttactactacaatactgaaaca
aaacagtctacttgggagaaaccggatgatctgaaaacacctgctgagcaacttttatct
aaatgtccctggaaggaatacaaatctgactcgggaaagccttactattataattctcaa
acaaaagaatcccgctgggccaaacctaaagaacttgaggatcttgaaggataccagaat
accattgttgctggaagtcttattacaaaatcaaacctgcatgcaatgatcaaagctgaa
gaaagcagtaagcaagaagagtgcagcacaacatcaacagccccagttcctacaacagaa
attccgaccacaatgagcaccatggctgctgcggaagctgccgccgctgtcgttgctgct
gcagccgctgctgctgctgctgccgccgcagccaatgccagtgcttccacctctgcttcg
aatactgtcagtggaactggtccagttgttcctgagcctgaagttacttcgattgttgct
actgttgtagataacgagaatacagtgacaatttcaactgaagaacaagcacaacttact
agtactcctgctgttcaggaacagagtatggaagtatccagtaatactggagaagaaaca
gctaagcaggaaactgtagctgattttactcccaaaaaagaagaggaggaaagccaacca
gcaaagaaaacctatacttggaatacaaaggaagaggcaaagcaagcgtttaaagaatta
ttgaaagaaaagcgggtaccatctaatgcttcatgggaacaagctatgaaaatgatcatt
aatgatccacgatacagtgctttagcaaagttgagtgaaaaaaagcaagcctttaatgct
tacaaagtccagacagagaaagaagaaaaggaagaagcaagatcgaaatacaaagaggca
aaggaatcctttcagcgttttcttgaaaatcatgagaaaatgacttccacaaccagatac
aaaaaagcggagcaaatgtttggagagatggaagtctggaatgcaatatcagaacgtgat
cgtcttgaaatctatgaagatgttttattctttctttcaaaaaaagaaaaggagcaagca
aagcagttacgaaagagaaattgggaagccttaaaaaacatacttgacaacatggctaat
gtaacatactctactacctggtctgaagctcagcagtatctgatggataatccaactttt
gcagaagatgaggaattacagaacatggataaagaagatgcattaatttgctttgaagaa
cacatccgagctttagaaaaggaagaagaagaagaaaaacagaagagtttgctgagagaa
aggagacggcagcgtaaaaacagagaatcttttcagatatttttagatgaactgcatgaa
catggacaactgcattctatgtcatcttggatggaattgtatccaacaattagttccgac
attagatttactaatatgcttggtcaaccgggatcaactgcacttgaccttttcaagttt
tatgttgaggatcttaaagcacgttatcatgatgagaagaaaataataaaagacattcta
aaggataaaggatttgtagttgaagtaaataccaccttcgaagactttgtggccataatc
agttcaactaaaaggtcaaccacattagatgccggaaatattaagttggctttcaacagt
ttactagaaaaggcagaagcccgtgaacgcgaacgagaaaaagaggaggctcggaaaatg
aaacgaaaagagtctgcatttaagagtatgttgaaacaagctactcctccaatagaattg
gatgctgtctgggaagatattcgggagagatttgtaaaagagccagcatttgaggacata
actctagagtctgaaagaaaacgaatatttaaagattttatgcatgtgcttgagcatgaa
tgtcaacatcatcattcaaagaacaagaaacattctaaaaaatctaaaaaacatcacagg
aaacgttcccgttctagatcgggttcagattcagatgatgatgacagccattcaaagaaa
aaaagacagcgatcagagtctcggtctgcctcagaacattcttctagtgctgagtctgag
agaagttataagaagtcaaaaaaacataagaagaaaagcaagaagaggagacataaatct
gactctccagagtcagatgctgagcgagagaaggataaaaaagaaaaagaccgagaaagt
gaaaaagacagaactagacaaagatcagaatcaaaacacaaatcacctaagaaaaagact
ggaaaggattctgggaattgggatacttctggcagtgaactgagtgaaggggaattggaa
aagcgcagaaggacccttttggagcaactggatgatgatcaataa |
|---|
