Ailuropoda melanoleuca (giant panda): 100473647
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Entry
100473647 CDS
T01329
Symbol
SMC1B
Name
(RefSeq) structural maintenance of chromosomes protein 1B
KO
K06636
structural maintenance of chromosome 1
Organism
aml
Ailuropoda melanoleuca (giant panda)
Pathway
aml04110
Cell cycle
aml04114
Oocyte meiosis
Brite
KEGG Orthology (KO) [BR:
aml00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
100473647 (SMC1B)
04114 Oocyte meiosis
100473647 (SMC1B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
aml03036
]
100473647 (SMC1B)
Chromosome and associated proteins [BR:
aml03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
100473647 (SMC1B)
Meiosis-specific proteins
Cohesin complex and associated proteins
100473647 (SMC1B)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_21
AAA_23
AAA_15
AAA_29
ATG16
Ca_chan_IQ
Motif
Other DBs
NCBI-GeneID:
100473647
NCBI-ProteinID:
XP_002922958
Ensembl:
ENSAMEG00000008966
UniProt:
G1LR03
LinkDB
All DBs
Position
15:complement(87153486..87226112)
Genome browser
AA seq
1235 aa
AA seq
DB search
MGHLELLLVENFKSWRGRQVIGPFRRFTCIIGPNGSGKSNVMDALSFVMGEKTANLRVKN
IQELIHGAHIGKPVSSSASVKIVYVEESGKEKTFTRTIRGVCSEFHFDDNLVSRSVYIAE
LEKIGIIVKARNCLVFQGTVESISMKKPKERTQFFEEISTSGELIAEYEEKKRKLQKAEE
DAQFNFNKKKNVAAERKHAKLEKEEAERYQSLLEELKMNKIQLHLFQLYHNEQKIRFLNT
KLEHVSRDLSVSKESLSHHENIVKAKKKEHGMLTRQLQQTEKELKSLEALLNQKRPQYIK
AKENTSHHLKKLEVAKKSIKDSEKQCSKQEDDIKALETELVDLDGAWRSFEKQVEEEILY
KGRDIELEASQLDRYKELKEQVRKKVAIMTQQLEKLQWEQKADKDRLAFEKRRHGEVQEN
LKQIKEQIEDYKKRIEKLEEYTKTCTDCLKEKKQQEEILVGEIENAKSRMSEVNEELNLI
RSELQNAGIDTHEGNRQQKRAEVLGHLKRLYPDSVFGRLLDLCHPIHKKYQLAVTKLFGR
YMIAIVVTSEKVAKDCIRFLKEERAEPETFLALDYLDIKPINERLREIKGCKMVIDVIKT
QFPQLKKVIQFVCGNGLVCETVEEARHIAFGGPERRKTVALDGTLFLKSGVISGGSSDLK
YKARCWDEKEIKNLRDRRAQLIQELKDLMKILRKEADLKQIQTLVQGTHTRLKYSQSELE
MIKKKHLAAFYREQSQLQSELLNIESQCTMLSEGIKERQQRIEEFQEKIDKVEDEIFQHF
CEEIGVENIREFEKKHVKQQQEIDQKRLEFEKQKTRLNVQLEYSRNQLKKRLSKINTLKA
TIQKGREDIDDLKQAEENCLRIVDELMAKRQQLKDVFVTQTANAEKVQAQLEEERKKFLA
IDRDVGKWQKEVVIIQTSLEQKRLEKHNLLLDCKVQDIAILLLSGSLDDIIEVELGTEAE
STQATVDIYEKEEAIEVDYSSLRDDLKALQTDKEVEAHLRLLLQQVASQEDILLKTAAPN
LRALEKLKTVRDKFQESTDAFEASRKEARMCRQEFEQVKKRRYDLFSQCFEHVSISIDQI
YKQLCRNSSAQAFLSPENPEEPYLGGISYNCVAPGKRFMPMDNLSGGEKCVAALALLFAV
HSFRPAPFFVLDEVDAALDNTNIGKVSSYIKEQTQEQFQMIVISLKEEFYSKADALIGVY
PEHNDCMCSRVLTLDLSPYPDTEGQESSKRNRELC
NT seq
3708 nt
NT seq
+upstream
nt +downstream
nt
atgggccacctggagctgttgctcgtggagaactttaagtcgtggcggggccgccaggtc
atcggccctttcaggaggttcacctgcatcatcggccccaatggctccggaaaatctaat
gtaatggacgcacttagttttgtaatgggagagaaaacagctaatttaagagtgaaaaat
attcaagaactcattcatggagcacatattggaaaacccgtctcttcttctgcaagtgtg
aaaattgtgtacgtggaggaaagtggaaaagagaaaacatttacaaggactatccgaggg
gtatgctcagaatttcattttgacgataatctggtgagtcgttctgtgtacatagctgag
ctggaaaagataggcataatagtcaaagcacggaactgtctagtgtttcagggaactgta
gagtcgatttcaatgaaaaaacccaaagaaagaacccagttttttgaggaaatcagcact
tcaggagagcttatagcagaatatgaggaaaagaaacgaaagttacagaaagctgaagag
gatgcacagtttaattttaataagaaaaaaaatgtagctgcagaacgcaaacatgcaaaa
ttagagaaagaagaggcagaacgttaccagagtctccttgaagaactgaaaatgaacaag
atacaattacatcttttccaactatatcataatgagcagaaaattcgtttcctgaacact
aagttagagcatgtgagtagggacttgagtgtctcaaaggagtctctttctcatcatgaa
aacatagtgaaagccaagaagaaggaacatggaatgctaaccagacagctacaacaaaca
gaaaaagaattaaaatctcttgaagcgcttttaaatcagaaaaggcctcagtacattaaa
gccaaagaaaacacttctcaccacctcaagaaattagaagtggctaagaaatcaataaag
gacagtgagaaacagtgttctaaacaggaagatgacataaaagccttggagacagagctg
gttgatttagatggtgcatggagaagttttgaaaagcaggttgaggaagaaatcttatac
aaggggcgagacattgaactagaagccagtcagctggatcgttacaaagaacttaaggaa
caagtaagaaagaaagtggctataatgacccaacagctggaaaagctgcagtgggaacag
aaggctgacaaagacagactggcgtttgaaaagaggaggcatggagaagttcaggaaaat
ctgaaacaaataaaagaacaaatagaagattataaaaaacgaatagagaagttagaggag
tatacaaaaacatgcacggattgcttgaaagagaaaaaacagcaagaggaaatcctagtg
ggtgaaattgagaacgcaaaatcaaggatgtctgaagttaatgaagaattgaatctcatt
agaagcgaactacagaatgccggaattgacacccatgaggggaaccgtcagcaaaagaga
gcagaggttctggggcaccttaagaggctttacccagattctgtgtttggaagactactt
gacctctgtcatcctattcataagaaataccagctggctgttactaaactttttggccgg
tacatgattgccattgttgtcacctctgaaaaggtagcaaaagattgtattcgattcctg
aaggaagaaagagctgaaccggagacattccttgctctagattaccttgatatcaagcca
atcaatgaaagattaagggaaattaaaggctgtaaaatggtgattgatgtcataaagact
cagtttcctcagctgaagaaagtaattcagtttgtgtgtggaaatggccttgtctgtgag
actgtggaggaagcgaggcatattgcattcggtggacctgagagacggaaaacagtagct
cttgatggaacattatttttaaaatctggggtgatctctggaggatcaagtgacttaaaa
tacaaggctagatgctgggatgagaaggagataaagaacttaagagacagaagagcccag
ctgatccaggaattaaaggatttaatgaagatacttcgcaaggaagcagatttgaaacag
atacagactctagtacaaggaactcatacccgactcaaatattcgcaaagtgaactagag
atgattaaaaagaagcaccttgctgctttttaccgggaacaatctcagctacaaagcgaa
ctactaaatattgagtctcagtgtactatgttgagtgaaggaatcaaagaacggcaacaa
agaattgaagaatttcaagaaaagatagataaggtggaagatgagattttccaacacttc
tgtgaagaaattggtgtggaaaatattcgtgaatttgagaagaaacatgttaaacagcaa
caagaaattgatcagaaaagattagaatttgagaaacaaaagactcggcttaatgttcaa
ctcgaatatagtcgcaatcagctgaagaagagactgagtaagatcaatacgttaaaagca
accatccagaaaggcagagaggacattgatgacctaaagcaggctgaagaaaattgtctg
cgaattgtggatgagctcatggcgaagcggcagcaacttaaggatgtgtttgtcactcag
actgccaacgctgagaaggtccaagctcaactggaagaagaacgcaagaaatttttggct
attgacagggacgtgggaaaatggcaaaaagaagttgtaatcattcagacttctctggaa
cagaaacggctagagaagcataatctgctgcttgactgcaaagttcaggacattgcaata
ctcctcctgtcggggtcactggacgacatcattgaagtggagttgggaactgaagcagaa
agtacccaggcgacagttgacatctatgagaaagaagaagccatcgaggtagactacagc
tctctaagagacgatttgaaggctctacaaactgataaagaagtggaggcccaccttaga
ctcctgctgcaacaggtggcgtcccaggaagacatcctgttgaagacggcggccccaaac
ctgagagccctggagaaactgaagactgtccgagacaagtttcaggagtccacagatgct
tttgaggccagcagaaaggaagccagaatgtgtcggcaagagtttgaacaggtgaaaaaa
aggagatacgacctcttcagccagtgttttgagcacgtctccatctcaattgatcaaatc
tacaagcagctctgcagaaacagcagtgcccaagcatttcttagcccagagaacccagaa
gagccttacctaggaggaattagctataactgtgtggctccaggcaaacggtttatgcca
atggacaatctgtcggggggagaaaagtgtgtggccgcattagccctcctgttcgccgtg
cacagttttcggcccgctccattctttgtgttagatgaagtggacgcagccctggacaac
acgaatatcggcaaggtctcaagttacatcaaagagcagactcaggagcagtttcagatg
atagtcatttccctaaaggaggagttctactccaaagccgacgcgctgataggcgtgtat
ccagagcacaacgactgcatgtgcagcagagttctgaccctggacctttctccgtatcca
gacaccgaaggccaagaaagcagcaaaagaaaccgagagttgtgttag
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