KEGG   Ailuropoda melanoleuca (giant panda): 100473707
Entry
100473707         CDS       T01329                                 
Symbol
TAF5L
Name
(RefSeq) TAF5-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 5L isoform X2
  KO
K03130  transcription initiation factor TFIID subunit 5
Organism
aml  Ailuropoda melanoleuca (giant panda)
Pathway
aml03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:aml00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    100473707 (TAF5L)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:aml03021]
    100473707 (TAF5L)
   03036 Chromosome and associated proteins [BR:aml03036]
    100473707 (TAF5L)
Transcription machinery [BR:aml03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIID
     100473707 (TAF5L)
   Coactivators
    SAGA/TFTC/STAGA complex
     100473707 (TAF5L)
Chromosome and associated proteins [BR:aml03036]
 Eukaryotic type
  Histone modification proteins
   HAT complexes
    PCAF complex
     100473707 (TAF5L)
    STAGA complex
     100473707 (TAF5L)
    TFTC complex
     100473707 (TAF5L)
    SAGA complex
     100473707 (TAF5L)
    SLIK complex
     100473707 (TAF5L)
SSDB
Motif
Pfam: Beta-prop_WDR5 Beta-prop_THOC3 WD40 Beta-prop_WDR3_1st WD40_Prp19 Beta-prop_CAF1B_HIR1 WD40_WDHD1_1st Beta-prop_WDR3_2nd WD40_CDC20-Fz WD40_Gbeta Beta-prop_EML_2 Beta-prop_WDR36-Utp21_2nd Beta-prop_TEP1_2nd TFIID_NTD2 WD40_MABP1-WDR62_2nd EIF3I WDR55 Beta-prop_WDR90_POC16_2nd Beta-prop_EML Beta-prop_WDR36-Utp21_1st Beta-prop_TEP1_C ANAPC4_WD40 Beta-prop_WDR75_1st WD40_MABP1-WDR62_1st WDR90_beta-prop_4th Beta-prop_SCAP Beta-prop_IFT122_1st Beta-prop_Aladin Beta-prop_WDR41 Beta-prop_IFT140_1st Beta-prop_RIG_2nd NBCH_WD40 Tricorn_2nd RMC1_N Beta-prop_SPT8 Beta-prop_HPS5 Beta-prop_DCAF4 Beta-prop_Vps41 Beta-prop_EIPR1 WD40_RFWD3 Beta-prop_WDR19_1st PEP5_VPS11_N PROPPIN Beta-prop_IP5PC_F eIF2A Ge1_WD40 WD_LRWD1 Nbas_N Mala_s_1-like vATP-synt_AC39
Other DBs
NCBI-GeneID: 100473707
NCBI-ProteinID: XP_002921591
Ensembl: ENSAMEG00000026115
UniProt: D2HHC8
LinkDB
Position
6:62423864..62455172
AA seq 589 aa
MKRVRTEQIQMAVSCYLKRRQYVDSDGPLKQGLRLSQTPEEMAANLTVQSESGCANIVSA
APCQAEPQQYEVQFGRLRNFLTDSDSQHSHEVMPLLYPLFVYLHLNLVQNSPKSTVESFY
SRFHGMFLQNASQKDVIEQLQTTQTIQDILSNFKLRAFLDNKYVVRLQEDSYNYLIRYLQ
SDNNTALCKVLTLHIHLDVQPAKRTDYQLYTSGSSSRGEGSGLEPTDMPAPILQNEAALE
VLQESIKRVKDGPPSLTTICFYAFYNTEQLLNTAEISPDSKLLAAGFDNSCIKLWSLRSK
KLKSEPHQVDVSRIHLACDILEEEDDEDDNAGTEMKILRGHCGPVYSTRFLADSSGLLSC
SEDMSIRYWDLGSFTNTVLYQGHAYPVWDLDISPYSLYFASGSHDRTARLWSFDRTYPLR
IYAGHLADVDCVKFHPNSNYLATGSTDKTVRLWSAQQGNSVRLFTGHRGPVLSLAFSPNG
KYLASAGEDQRLKLWDLASGTLYKELRGHTDNITSLTFSPDSSLIASASMDNSVRVWDIR
NTYCSAPADGSSGELVGVYTGQMSNVLSVQFMACNLLLVTGITQENQEH
NT seq 1770 nt   +upstreamnt  +downstreamnt
atgaaacgagtgcgcaccgagcagattcagatggcagtgtcctgctacctcaaacgccgg
cagtacgtggactccgacggtcccctgaagcaaggactgcggctgtcacagactcctgag
gagatggcggccaacctcacagtccaatcagaatccggttgtgccaacatagtgtctgca
gccccttgccaggcagagccccagcaatatgaagtacagttcggacgactacggaatttt
ctcactgattctgattcccagcatagccacgaagtgatgcctctcctctatcctctcttt
gtctacctccatctcaacctggtccagaacagtccgaagagcacagtggaaagtttttac
agccgcttccatggaatgtttctgcagaacgctagccagaaggatgtcattgagcagcta
cagaccactcaaaccatccaggacatcctgtctaacttcaagcttcgagcattcctagat
aacaagtacgtggtccgtctccaggaagacagctacaactaccttatccgctacctccaa
agtgacaacaacaccgccctgtgcaaagtcctcaccttgcatatccatcttgacgtgcag
cctgccaagagaacagattaccagctctataccagcggcagctcctctcgaggcgagggc
agcggcttggagcccactgacatgcccgcccctattctgcagaacgaggctgccctggag
gtcttgcaggagagcattaagcgcgtcaaggatggccctccctccctcactaccatctgt
ttctatgccttctataacacagagcagctgttgaacactgcagaaatctccccagatagc
aagctgcttgctgctgggtttgacaactcctgtataaaactgtggagtttacgatccaag
aagttaaaatcagaaccccatcaagtagacgtgtcccgcatccacttggcttgtgacatt
ctggaggaggaggatgatgaggatgacaatgcgggcacagagatgaagatactacgggga
cactgtggaccagtgtacagcacaaggttcctcgcagacagctcagggttgctctcttgt
tctgaagatatgtccattaggtactgggacctcgggagtttcaccaacactgtgttgtac
caaggacatgcctaccctgtgtgggatctggacattagcccatatagcctgtactttgcc
agcgggtcccatgaccgcaccgcgaggctgtggtcatttgatcggacgtacccgctgaga
atatatgccggacacctggcagatgtggactgtgtcaaattccaccctaattcaaactac
ttagccacaggctcgaccgacaagactgtccggctgtggagtgctcaacagggcaactcg
gtgaggctcttcacgggccaccgtggccctgtgctctctcttgccttttctcccaacggt
aagtacttggcctcagctggcgaggaccagcggctgaagctatgggacttggcctctggg
actctttataaagaactgagaggtcacacggacaacatcaccagcctcaccttcagtccg
gacagcagtctgatcgcgtctgcgtccatggacaactcggtgcgtgtctgggacatcagg
aacacttactgcagcgcgcctgccgacggctcgtctggtgaactcgtgggcgtgtacacc
gggcagatgagcaatgtactgagtgtgcagttcatggcctgcaaccttcttctagtgact
ggaatcacacaagagaatcaggaacattaa

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