Ailuropoda melanoleuca (giant panda): 100473707
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Entry
100473707 CDS
T01329
Symbol
TAF5L
Name
(RefSeq) TAF5-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 5L isoform X2
KO
K03130
transcription initiation factor TFIID subunit 5
Organism
aml
Ailuropoda melanoleuca (giant panda)
Pathway
aml03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
aml00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
100473707 (TAF5L)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
aml03021
]
100473707 (TAF5L)
03036 Chromosome and associated proteins [BR:
aml03036
]
100473707 (TAF5L)
Transcription machinery [BR:
aml03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
100473707 (TAF5L)
Coactivators
SAGA/TFTC/STAGA complex
100473707 (TAF5L)
Chromosome and associated proteins [BR:
aml03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
100473707 (TAF5L)
STAGA complex
100473707 (TAF5L)
TFTC complex
100473707 (TAF5L)
SAGA complex
100473707 (TAF5L)
SLIK complex
100473707 (TAF5L)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
TFIID_NTD2
ANAPC4_WD40
NBCH_WD40
PROPPIN
Nup160
eIF2A
Ge1_WD40
Nbas_N
vATP-synt_AC39
Motif
Other DBs
NCBI-GeneID:
100473707
NCBI-ProteinID:
XP_002921591
Ensembl:
ENSAMEG00000026115
UniProt:
D2HHC8
LinkDB
All DBs
Position
6:62423864..62455172
Genome browser
AA seq
589 aa
AA seq
DB search
MKRVRTEQIQMAVSCYLKRRQYVDSDGPLKQGLRLSQTPEEMAANLTVQSESGCANIVSA
APCQAEPQQYEVQFGRLRNFLTDSDSQHSHEVMPLLYPLFVYLHLNLVQNSPKSTVESFY
SRFHGMFLQNASQKDVIEQLQTTQTIQDILSNFKLRAFLDNKYVVRLQEDSYNYLIRYLQ
SDNNTALCKVLTLHIHLDVQPAKRTDYQLYTSGSSSRGEGSGLEPTDMPAPILQNEAALE
VLQESIKRVKDGPPSLTTICFYAFYNTEQLLNTAEISPDSKLLAAGFDNSCIKLWSLRSK
KLKSEPHQVDVSRIHLACDILEEEDDEDDNAGTEMKILRGHCGPVYSTRFLADSSGLLSC
SEDMSIRYWDLGSFTNTVLYQGHAYPVWDLDISPYSLYFASGSHDRTARLWSFDRTYPLR
IYAGHLADVDCVKFHPNSNYLATGSTDKTVRLWSAQQGNSVRLFTGHRGPVLSLAFSPNG
KYLASAGEDQRLKLWDLASGTLYKELRGHTDNITSLTFSPDSSLIASASMDNSVRVWDIR
NTYCSAPADGSSGELVGVYTGQMSNVLSVQFMACNLLLVTGITQENQEH
NT seq
1770 nt
NT seq
+upstream
nt +downstream
nt
atgaaacgagtgcgcaccgagcagattcagatggcagtgtcctgctacctcaaacgccgg
cagtacgtggactccgacggtcccctgaagcaaggactgcggctgtcacagactcctgag
gagatggcggccaacctcacagtccaatcagaatccggttgtgccaacatagtgtctgca
gccccttgccaggcagagccccagcaatatgaagtacagttcggacgactacggaatttt
ctcactgattctgattcccagcatagccacgaagtgatgcctctcctctatcctctcttt
gtctacctccatctcaacctggtccagaacagtccgaagagcacagtggaaagtttttac
agccgcttccatggaatgtttctgcagaacgctagccagaaggatgtcattgagcagcta
cagaccactcaaaccatccaggacatcctgtctaacttcaagcttcgagcattcctagat
aacaagtacgtggtccgtctccaggaagacagctacaactaccttatccgctacctccaa
agtgacaacaacaccgccctgtgcaaagtcctcaccttgcatatccatcttgacgtgcag
cctgccaagagaacagattaccagctctataccagcggcagctcctctcgaggcgagggc
agcggcttggagcccactgacatgcccgcccctattctgcagaacgaggctgccctggag
gtcttgcaggagagcattaagcgcgtcaaggatggccctccctccctcactaccatctgt
ttctatgccttctataacacagagcagctgttgaacactgcagaaatctccccagatagc
aagctgcttgctgctgggtttgacaactcctgtataaaactgtggagtttacgatccaag
aagttaaaatcagaaccccatcaagtagacgtgtcccgcatccacttggcttgtgacatt
ctggaggaggaggatgatgaggatgacaatgcgggcacagagatgaagatactacgggga
cactgtggaccagtgtacagcacaaggttcctcgcagacagctcagggttgctctcttgt
tctgaagatatgtccattaggtactgggacctcgggagtttcaccaacactgtgttgtac
caaggacatgcctaccctgtgtgggatctggacattagcccatatagcctgtactttgcc
agcgggtcccatgaccgcaccgcgaggctgtggtcatttgatcggacgtacccgctgaga
atatatgccggacacctggcagatgtggactgtgtcaaattccaccctaattcaaactac
ttagccacaggctcgaccgacaagactgtccggctgtggagtgctcaacagggcaactcg
gtgaggctcttcacgggccaccgtggccctgtgctctctcttgccttttctcccaacggt
aagtacttggcctcagctggcgaggaccagcggctgaagctatgggacttggcctctggg
actctttataaagaactgagaggtcacacggacaacatcaccagcctcaccttcagtccg
gacagcagtctgatcgcgtctgcgtccatggacaactcggtgcgtgtctgggacatcagg
aacacttactgcagcgcgcctgccgacggctcgtctggtgaactcgtgggcgtgtacacc
gggcagatgagcaatgtactgagtgtgcagttcatggcctgcaaccttcttctagtgact
ggaatcacacaagagaatcaggaacattaa
DBGET
integrated database retrieval system
