Ailuropoda melanoleuca (giant panda): 100473887
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Entry
100473887 CDS
T01329
Symbol
USP30
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 30 isoform X1
KO
K11851
ubiquitin carboxyl-terminal hydrolase 30 [EC:
3.4.19.12
]
Organism
aml
Ailuropoda melanoleuca (giant panda)
Pathway
aml04137
Mitophagy - animal
Brite
KEGG Orthology (KO) [BR:
aml00001
]
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
100473887 (USP30)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
aml01002
]
100473887 (USP30)
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
aml04131
]
100473887 (USP30)
04121 Ubiquitin system [BR:
aml04121
]
100473887 (USP30)
Enzymes [BR:
aml01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
100473887 (USP30)
Peptidases and inhibitors [BR:
aml01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
100473887 (USP30)
Membrane trafficking [BR:
aml04131
]
Autophagy
Mitophagy
Other mitophagy associated proteins
100473887 (USP30)
Ubiquitin system [BR:
aml04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
100473887 (USP30)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
UCH_1
DUF5700
Motif
Other DBs
NCBI-GeneID:
100473887
NCBI-ProteinID:
XP_002921274
Ensembl:
ENSAMEG00000016515
UniProt:
G1MDL8
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All DBs
Position
12:17135742..17164338
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AA seq
517 aa
AA seq
DB search
MLSSRAQAAMTAADRAIQRFLRTGAAVRYKVMKNWGVIGGIAAALAAGIYVIWGPITERK
KRRKGLVPGLVNLGNTCFMNSLLQGLSACPAFIKWLEEFTTQYTRDQKEAPSHQYLSLTL
LHLLKALSCQEVTDDEVLDASCLLDVLRMYRWQISSFEEQDAHELFHVITSSLEDERDRQ
PRVTHLFDVHSLEQQPEITPKQITCRTRGSPHPTSNHWKSQHPFHGRLTSNMVCKHCEHQ
SPVRFDTFDSLSLSIPAATWGHPLTLDHCLHHFISSESVRDVVCDNCTQIEAKGTSNGEK
VEHQRTTFVKQLKLGKLPQCLCIHLQRLSWSSHGAPLKRHEHVQFNEFLMMDIYKYHLLG
HKPGQHSPKPGEAGGPPDDLQDGPAAPSSVLNQPGGPKTQIFMNGACSPSLLPPLPAPLP
FPLPVVPDYSSSTYLFRLMAVVVHHGDMHSGHFVTYRRSPPSAKNPLSTSNQWLWISDDT
VRKASLQEVLSSSAYLLFYERVLSKMQHQGREYRSEE
NT seq
1554 nt
NT seq
+upstream
nt +downstream
nt
atgctgagctcccgggctcaggcggcgatgaccgcggcggaccgggccatccagcgcttc
ctgcggaccggggcggccgtcagatataaagtcatgaagaactggggtgtcataggtgga
attgctgcagctcttgccgcgggaatctatgtgatttggggtcctatcacagaaagaaag
aagcgtagaaaaggactggtgcctggccttgtcaacttagggaacacctgcttcatgaac
tccctgctgcaaggtctgtctgcctgccctgctttcatcaagtggctggaagagtttacc
acgcaatacaccagggatcagaaggaggccccctcacaccagtatttatccttaacgctg
ttgcacctcctcaaagctctgtcctgccaagaagtcaccgacgatgaggtcttagatgca
agctgcttgttggatgtattaagaatgtacagatggcagatctcttcatttgaagaacag
gatgcccacgagttattccatgtcattacctcctccctggaagacgagcgggaccggcag
ccccgggtcacccatttgtttgatgtgcattccctggagcagcagccagaaataactccc
aaacaaataacctgccggacaagagggtcacctcaccccacgtccaatcactggaaatct
cagcatcctttccatggaaggctgacgagtaacatggtctgcaaacactgtgaacaccag
agtcctgttcgatttgataccttcgacagcctttcactgagtattccagctgccacgtgg
gggcatccactgaccctggaccactgccttcaccacttcatctcatccgaatccgtgcgg
gacgtcgtgtgtgacaactgtacgcagatcgaagccaaagggacgtcgaatggggagaag
gtggaacaccagaggaccacgttcgttaaacagctgaaactgggcaagctcccgcagtgt
ctctgcatccacctccagcgactgagctggtccagccacggcgcacccctgaagcgccac
gagcacgtgcagttcaacgagttcctgatgatggacatctacaagtatcacctcctcggc
cacaaacccggccagcacagccccaagcccggcgaggctggggggccccccgacgacctg
caggatgggccggccgcccccagttcagttctgaaccagcccgggggcccgaaaacacaa
atttttatgaatggcgcctgctccccatctttattgcccccgctgccggccccgctgccc
ttcccgctcccggtggttcctgactacagctcctccacgtacctcttccggctgatggca
gttgtggtccaccacggagacatgcactcggggcacttcgtgacgtaccgacggtcccca
ccgtcggccaagaaccctctttcaaccagcaaccagtggctgtggatctccgacgacacg
gtccgcaaggccagcctgcaggaggtcctgtcctccagcgcctacctgctgttttatgag
cgggttctttccaagatgcagcaccagggccgggagtacaggtccgaagaatga
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