Ailuropoda melanoleuca (giant panda): 100474056
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Entry
100474056 CDS
T01329
Symbol
CHD5
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 5
KO
K14435
chromodomain-helicase-DNA-binding protein 5 [EC:5.6.2.-]
Organism
aml
Ailuropoda melanoleuca (giant panda)
Brite
KEGG Orthology (KO) [BR:
aml00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
aml03036
]
100474056 (CHD5)
Chromosome and associated proteins [BR:
aml03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
100474056 (CHD5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
CHDCT2
CHDII_SANT-like
Helicase_C
CHDNT
PHD
DUF1087
Chromo
PHD-1st_NSD
HDA2-3
ResIII
PHDvar_NSD
HTH_Hrp3
DEAD
PHD_2
AAA_22
Motif
Other DBs
NCBI-GeneID:
100474056
NCBI-ProteinID:
XP_034527334
Ensembl:
ENSAMEG00000009880
LinkDB
All DBs
Position
11:complement(4028076..4081368)
Genome browser
AA seq
1932 aa
AA seq
DB search
MLVRLPPSSKEEDGGLGAFDDYFPEEPVGLPKKKKSKKLKENRSKGKRKKKEGSNDELSE
NEEDLEEKSESEGSDYSPNKKKKKKLKDKKEKKAKRKRKDDDEDDNDDGCLKEPKSSGQL
MAEWGLDDVEYLFSEADYHTLTNYKAFSQFLRPLIAKKNPKIPMSKMMTVLGAKWREFSA
NNPFKGSSAAAAAAAVAAAVETVTIAPPLAVSPQQAPQPVPIRKAKTKEGKGPGVRKKIK
GSKDAKKKGKGRKVAGLKFRFGGISNKRKKGSSSEEDEREESDFDSASIHSSSVRSEGST
ALGKKSKRRRKKKRIDDGDGYETDHQDYCEVCQQGGEIILCDTCPRAYHLVCLDPELEKA
PEGKWSCPHCEKEGIQWEPKDDDDEEEEGGCEEEEDDHMEFCRVCKDGGELLCCDACPSS
YHLHCLNPPLPEIPNGEWLCPRCTCPPLKGKVQRILHWRWTEPPAPFMVGLPGSDVEPGV
PPPKPLEGIPEREFFVKWAGLSYWHCSWVKELQLELYHTVMYRNYQRKNDMDEPPPFDYG
SGDEDGKSEKRKNKDPLYAKMEERFYRYGIKPEWMMIHRILNHSFDKKGDVHYLIKWKDL
PYDQCTWEIDDIDIPYYDNLKQAYWGHRELMLGEDARLPKRLVKKGKKLKDDKQEKPPDT
PIVDPTVKFDKQPWYIDSTGGTLHPYQLEGLNWLRFSWAQGTDTILADEMGLGKTVQTIV
FLYSLYKEGHSKGPYLVSAPLSTIINWEREFEMWAPDFYVVTYTGDKESRSVIRENEFAF
EDNAIRSGKKVFRMKKEVQIKFHVLLTSYELITIDQAILGSIEWACLVVDEAHRLKNNQS
KFFRVLNSYKIDYKLLLTGTPLQNNLEELFHLLNFLTPERFNNLEGFLEEFADISKEDQI
KKLHDLLGPHMLRRLKADVFKNMPAKTELIVRVELSQMQKKYYKFILTRNFEALNSKGGG
NQVSLLNIMMDLKKCCNHPYLFPVAAVEAPVLPNGSYDGSSLVKSSGKLMLLQKMLKKLR
DEGHRVLIFSQMTKMLDLLEDFLEYEGYKYERIDGGITGGLRQEAIDRFNAPGAQQFCFL
LSTRAGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQNKKVMIYRFVTRASVEER
ITQVAKRKMMLTHLVVRPGLGSKSGSMTKQELDDILKFGTEELFKDDVEGMMSQGQRPVT
PIPDVQSSKGGALAASAKKKHGSTPPGDNKDVEDSSVIHYDDAAISKLLDRNQDATDDTE
LQNMNEYLSSFKVAQYVVREEDGVEEVEREIIKQEENVDPDYWEKLLRHHYEQQQEDLAR
NLGKGKRVRKQVNYNDASQEDQEWQDELSDNQSEYSIGSEDEDEDFEERPEGQSGRRQSR
RQLKSDRDKPLPPLLARVGGNIEVLGFNARQRKAFLNAIMRWGMPPQDAFNSHWLVRDLR
GKSEKEFRAYVSLFMRHLCEPGADGAETFADGVPREGLSRQHVLTRIGVMSLVRKKVQEF
EHVNGKYSTPDLIPEGPEGKKPSEVISSDPNTPVPASPAHLLPAPLGLPDKMEAQLGYMD
EKELGVQKPKKPPEIQALPTALDRVEGEDKQESSDGKEQPEETEKAPPSPEQLPREEVLP
EKEKILDKLELSLIHSRGDGSGFRPDDTKVEEKEPFETQQNGDKEEDEEGKKEDKNGKFK
FMFNIADGGFTELHTLWQNEERAAVSSGKIYDIWHRRHDYWLLAGIVTHGYARWQDIQND
PRYMILNEPFKSEIHKGNYLEMKNKFLARRFKLLEQALVIEEQLRRAAYLNMTQDPSHPA
MALNARLAEVECLAESHQHLSKESLAGNKPANAVLHKVLNQLEELLSDMKADVTRLPSML
SRIPPVAARLQMSERSILSRLTNRAGDPTIQQGAFGNSQMYNNNFGPNFRGPGPGGIVNY
NQMPLGPYVTDI
NT seq
5799 nt
NT seq
+upstream
nt +downstream
nt
atgcttgtgagacttccaccctcatctaaagaagaagatggtggccttggtgcctttgat
gactatttccctgaggagcccgtgggccttcccaagaagaagaaatccaagaagctcaag
gagaaccggtccaaagggaagcggaagaaaaaagaggggagcaatgatgagctgtcagaa
aacgaagaggatctggaagagaagtcggagagtgagggcagtgactactcccctaataaa
aagaagaagaaaaagctcaaggacaagaaggagaaaaaagccaagcgaaaaaggaaggat
gatgatgaggatgataatgatgacgggtgtctaaaggagcccaagtcctcggggcagctg
atggccgagtggggcctggatgacgtggagtacctgttctcggaggctgactaccacacg
ctgaccaactacaaggccttcagccagttcctcaggccgctcatcgccaagaagaacccg
aagatccccatgtccaaaatgatgaccgttctgggagccaagtggcgggagttcagtgcc
aacaaccctttcaaggggagctcggcagcggcggctgcggcggcagtggccgcggccgtg
gagacagtcaccattgcccctccgctggctgtcagcccccagcaggcaccccagcccgta
cctatccgcaaggccaagaccaaggagggcaaggggcccggagtgaggaagaagatcaaa
gggtccaaggatgcgaagaaaaagggcaaggggaggaaggtagccgggctcaagttccgc
tttggaggaatcagcaacaagaggaagaaaggctcctcgagcgaggaggatgagcgggag
gagtccgacttcgacagtgccagcatccacagctcctccgtgcgctctgagggctccaca
gcccttgggaagaagagcaagagacggcgcaagaagaagaggattgacgatggcgatggc
tacgagacggaccaccaggactactgtgaggtgtgccagcagggcggggaaatcatcttg
tgtgacacctgcccgcgggcctaccacctcgtctgccttgacccagagctggagaaggct
cccgagggcaagtggagctgtccccattgtgagaaggaggggatccagtgggagccaaag
gacgacgacgacgaggaggaggagggcggctgcgaggaggaggaggacgaccacatggag
ttctgccgcgtatgcaaggacggcggcgaactactctgctgcgacgcgtgcccctcctcc
taccacctgcactgcctcaacccgccgctgcccgagatcccaaacggtgaatggctctgc
ccgcgctgtacttgccccccgctgaagggcaaagtccagcggatcctacactggaggtgg
acggagccccccgcccccttcatggtggggctgccggggtccgacgtggagcctggggtc
cccccacccaagcccctggagggcattccggagagagagttctttgtcaagtgggctggg
ctctcctactggcactgctcctgggtgaaggagctacagctggagctataccacacggtg
atgtatcgcaactaccaaagaaagaacgacatggacgagccgccgccctttgactacggc
tctggcgatgaggatggcaagagcgagaaaaggaagaacaaggaccctctctatgccaag
atggaggagcgtttctaccgctacggcatcaagcccgagtggatgatgatccaccgcatc
ctgaaccacagcttcgacaagaagggggacgtgcactacctgatcaagtggaaagacctg
ccctatgaccagtgcacctgggagattgacgacatcgacatcccctactacgacaacctg
aagcaggcctactggggccacagggagctgatgctgggtgaggatgcccggctgcccaag
aggctggtcaagaagggcaagaagctgaaggacgataaacaggagaagccaccagacaca
cccattgtggatcccacggtcaagtttgacaagcagccttggtacattgactccacgggc
ggcacgctgcacccataccagttggagggcctcaactggctgcgcttctcctgggcccag
ggcacagacaccatcctggctgacgagatgggtctgggcaagaccgtgcagaccatcgtc
ttcctttactccctgtacaaggaggggcactccaaggggccctacctggtcagtgcgccc
ctgtccaccatcatcaactgggagcgtgagtttgagatgtgggcccccgacttctatgtg
gtcacctacacgggggacaaggagagccgctccgtgatccgggagaatgagtttgctttt
gaggacaatgccattcggagtgggaagaaggtgttccgcatgaagaaagaagtgcagatc
aaatttcacgtcctgctcacgtcctacgagctcatcaccatcgaccaggccatcctgggc
tccatcgagtgggcctgcctagtggtggacgaggcccaccggctcaagaacaaccagtcc
aagttctttagggtcttaaacagctacaagatcgattacaagctgctgctgacggggacc
ccccttcagaacaacctggaggagctgttccaccttctcaacttcctgactccagagagg
ttcaacaatctggagggcttcctggaggagtttgccgatatctccaaggaagaccagatc
aagaagctacatgacctgctggggccacacatgctgaggcggctcaaggctgatgtattc
aagaacatgccggccaagaccgagctgatcgttcgtgtggagctgagtcagatgcagaag
aagtactacaagttcatcctcacgcggaacttcgaggcgctcaactccaaggggggtggg
aaccaggtgtcgctgctcaacatcatgatggatctgaagaagtgttgcaaccacccctac
ctcttccccgtggctgccgtggaggcccctgtcttgcccaacggctcctacgacggcagc
tccctggtcaagtcttcgggcaagctcatgctgctgcagaagatgctgaagaaactgcgg
gacgaaggccaccgtgtgctcatcttctcccagatgaccaagatgctggaccttctggaa
gacttcctggagtatgagggctacaagtatgagcggattgatggtggcatcactggaggc
ctccgacaagaggcgatcgacagattcaacgcccctggggcgcagcagttctgctttctc
ctctcgacccgggcggggggcctgggcatcaacctggccacagcagacaccgtcatcatc
tacgactcggactggaatccacacaatgacatccaggccttcagccgcgcccaccgcatc
ggacagaacaagaaggtgatgatctaccgctttgtgacccgggcctcggtggaggagcgc
atcacgcaggtggccaaacgcaagatgatgctcacccacctggtggtgcggcccggcctc
ggctccaagtccggctccatgaccaagcaggagctggacgacatcctcaagttcggcaca
gaggagctcttcaaggacgacgtggagggcatgatgtctcagggccagaggcctgtcaca
cccatccctgatgtccagtcctccaaagggggagccctggctgccagtgccaagaagaag
catggcagcaccccgccaggcgacaacaaggacgtggaggacagcagtgtgatccactat
gacgatgcggccatctcgaagctgctggaccgaaaccaggacgccacggacgacacggag
ctgcagaatatgaacgagtacctgagctccttcaaggtggcgcagtatgtggtgcgcgag
gaggacggcgtggaggaggtggagcgggagatcatcaagcaggaagagaacgtggacccc
gattactgggagaagctgctgcgacaccactacgagcagcagcaggaggacctggcccgc
aatctgggcaagggcaagcgcgtccgcaagcaggtcaactacaacgacgcctcccaggag
gaccaggagtggcaggacgagctctcagataaccagtctgaatattccatcggctccgag
gatgaggacgaggactttgaggaaaggccagaagggcagagtggacggcgacaatccagg
aggcagctgaagagcgacagggacaagcccttgccacctcttcttgcccgtgtgggtggc
aatatcgaggtgctgggctttaatgcccggcagcggaaggcctttctgaacgccatcatg
cgctggggcatgcccccccaggacgccttcaactcccactggctggtgcgggaccttcgc
gggaagagcgagaaggaatttagagcctatgtgtccctcttcatgcggcacctgtgtgag
ccgggggctgacggcgcagagaccttcgcggacggcgtgccccgtgagggcctctcgagg
cagcacgtgctcacccgcatcggggtcatgtcactagttaggaagaaggttcaggagttt
gagcatgttaacgggaagtacagcaccccggacttgatccctgaggggcccgagggcaag
aagccaagcgaggtcatctcctcggaccccaacacgccagtgcctgccagccctgcccac
ctcctgccggccccactgggcctgccagacaaaatggaagcccagctgggctacatggat
gagaaggagctgggggttcagaagccaaagaagcccccagaaatccaggccctgccaact
gccctggacagagtggagggcgaggacaagcaagagagctcagatggcaaggagcagcca
gaggagacggagaaggccccgccgtccccagagcagctgccaagagaagaagtgcttcct
gagaaggagaaaattctggacaagctggagctaagcttgatccacagcagaggggacggc
agtggtttcaggccagatgacaccaaagtggaggagaaggagccctttgaaacacagcaa
aatggtgacaaagaggaagatgaggaggggaagaaggaggacaagaatgggaagttcaaa
ttcatgttcaacattgcagatgggggcttcacagagttgcacacactgtggcagaatgag
gaacgtgctgctgtgtcctcggggaaaatctacgacatctggcaccgacgccatgactac
tggctgctggcaggcatcgtgacgcacggctatgcccgctggcaggacatccagaatgac
ccgagatacatgatcctcaacgagcccttcaagtctgagatccacaagggcaactacctg
gaaatgaagaacaagtttctggcccgcaggttcaagctgctggagcaggccctggtcatc
gaggagcagctccggagggccgcgtaccttaacatgacccaggaccccagccaccccgcc
atggccctcaacgcccgcctggccgaggtggagtgccttgctgagagccaccagcacttg
tccaaggagtccctggccgggaacaagccagccaatgccgtcctgcacaaggtcctgaac
cagctggaggagctgctgagtgacatgaaagcggacgtgacgcgcctgccctccatgctg
tcccgcatcccccctgtggccgcccgcctccagatgtcggagcgcagcatcctgagccgc
ctgaccaaccgagccggcgaccccaccatccagcagggcgctttcggcaactcccagatg
tacaacaacaactttgggcccaacttccggggccctggaccgggagggattgtcaactac
aaccagatgcccctggggccctatgtgaccgatatctag
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integrated database retrieval system
