Ailuropoda melanoleuca (giant panda): 100474073
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Entry
100474073 CDS
T01329
Symbol
RABGEF1
Name
(RefSeq) rab5 GDP/GTP exchange factor isoform X1
KO
K20131
Rab5 GDP/GTP exchange factor
Organism
aml
Ailuropoda melanoleuca (giant panda)
Pathway
aml04137
Mitophagy - animal
Brite
KEGG Orthology (KO) [BR:
aml00001
]
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
100474073 (RABGEF1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
aml04131
]
100474073 (RABGEF1)
Membrane trafficking [BR:
aml04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
100474073 (RABGEF1)
Protein recycling
Other Rab GTPase associated proteins
100474073 (RABGEF1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VPS9
DUF5601
zf-A20
Motif
Other DBs
NCBI-GeneID:
100474073
NCBI-ProteinID:
XP_011232663
Ensembl:
ENSAMEG00000018176
UniProt:
G1MIM8
LinkDB
All DBs
Position
10:complement(14596212..14656979)
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AA seq
492 aa
AA seq
DB search
MSLKSERRGIHVDQSELLCKKGCGYYGNPAWQGFCSKCWREEYHKARQKQIQEDWELAER
LQREEEEAFASSQSSQGAQSLTFSKFEEKKTNEKTRKVTTVKKFFSASSRVGSKKAEIQE
AKAPSPSINRQTSIETDRVSKEFIEFLKTFHKTGQEIYKQTKMFLETMHYKRDLSIEEQS
ECTQDFYQNVAERMQTRGKVPAERVEKIMDQIEKYIMTRLYKYVFCPETTDDEKKDLAIQ
KRIRALHWVTPQMLCVPVNEEISEVSDMVVKAITDIIEMDSKRVPRDKLACITKCSKHIF
NAIKITKNEPASADDFLPTLIYIVLKGNPPRLQSNIQYITRFCNPSRLMTGEDGYYFTNL
CCAVAFIEKLDAQSLNLSQEDFDRYMSGQTSPRKQEPENWSPDACLGVKQMYKNLDLLSQ
LNERQERIMSEAKKLEKDLIEWTDGVAKEVQDIVEKYPLEIKPPNQSLAAIDSENVENDK
LPPPLQPQVYAG
NT seq
1479 nt
NT seq
+upstream
nt +downstream
nt
atgagccttaagtctgaacgccgaggaattcatgtggatcagtcggagctgctgtgcaag
aaaggatgtggttactatggcaacccggcttggcagggtttctgctccaagtgctggagg
gaagagtaccacaaagcaaggcagaagcagattcaggaggattgggaactggcagagcga
cttcagcgggaggaggaagaggcctttgccagcagtcagagcagccaaggggcccagtcc
ctcacattttccaagtttgaagaaaagaaaaccaatgagaagacccgcaaggttaccaca
gtaaagaaattcttcagtgcttcatccagggttggatcaaaaaaggcagaaattcaggaa
gcaaaagctcccagtccttccataaaccggcaaaccagcattgagacggatagagtgtct
aaagagttcatagaatttctcaagaccttccacaagacaggccaagaaatctataagcag
accaagatgtttttggaaacaatgcattacaaaagggatttgagcattgaggaacagtca
gagtgtactcaggatttttaccagaacgtggctgaaagaatgcagactcgtggaaaagtg
cctgcagaaagagttgagaagataatggatcagatcgaaaagtacatcatgactcgtctc
tataaatatgtgttctgtccagaaactacagatgatgagaagaaagatctcgctattcag
aagaggatcagagccctgcactgggttacacctcagatgctttgtgtccctgttaatgaa
gaaatttcagaagtatctgatatggtggtgaaagcaatcacagacatcattgaaatggat
tcaaagcgtgtgcctcgagataagttggcctgcatcaccaagtgcagcaagcacatcttc
aatgccattaagatcaccaagaacgagccagcctcagccgatgactttttaccaactctc
atctacatcgtcttgaagggcaaccccccacgccttcagtccaatatccagtacatcacc
cgcttctgcaacccaagccgattgatgactggagaggacggctactatttcaccaatctg
tgctgtgctgtggctttcattgagaaattagatgctcagtctttgaatttaagtcaggaa
gattttgatcgatacatgtccggccagacttctcccaggaagcaagaacctgagaattgg
tctcctgatgcttgcttaggggttaagcaaatgtataagaacttggatcttctgtctcag
ttgaatgaacggcaagaaaggatcatgagtgaagccaagaaacttgaaaaagacctaata
gagtggacggatggagttgcaaaagaggttcaagacattgttgagaaatacccgcttgaa
attaagcccccaaatcaatctttagcagccattgactctgaaaatgttgaaaatgataaa
cttcctccaccattgcaacctcaagtttatgcaggatga
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integrated database retrieval system
