KEGG   Ailuropoda melanoleuca (giant panda): 100474244
Entry
100474244         CDS       T01329                                 
Symbol
PSMC6
Name
(RefSeq) 26S proteasome regulatory subunit 10B isoform X1
  KO
K03064  26S proteasome regulatory subunit T4
Organism
aml  Ailuropoda melanoleuca (giant panda)
Pathway
aml03050  Proteasome
aml05010  Alzheimer disease
aml05012  Parkinson disease
aml05014  Amyotrophic lateral sclerosis
aml05016  Huntington disease
aml05017  Spinocerebellar ataxia
aml05020  Prion disease
aml05022  Pathways of neurodegeneration - multiple diseases
aml05169  Epstein-Barr virus infection
Brite
KEGG Orthology (KO) [BR:aml00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03050 Proteasome
    100474244 (PSMC6)
 09160 Human Diseases
  09172 Infectious disease: viral
   05169 Epstein-Barr virus infection
    100474244 (PSMC6)
  09164 Neurodegenerative disease
   05010 Alzheimer disease
    100474244 (PSMC6)
   05012 Parkinson disease
    100474244 (PSMC6)
   05014 Amyotrophic lateral sclerosis
    100474244 (PSMC6)
   05016 Huntington disease
    100474244 (PSMC6)
   05017 Spinocerebellar ataxia
    100474244 (PSMC6)
   05020 Prion disease
    100474244 (PSMC6)
   05022 Pathways of neurodegeneration - multiple diseases
    100474244 (PSMC6)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03051 Proteasome [BR:aml03051]
    100474244 (PSMC6)
Proteasome [BR:aml03051]
 Eukaryotic proteasome
  Regulatory particles
   PA700 (19S proteasome)
    ATPase subunits
     100474244 (PSMC6)
SSDB
Motif
Pfam: AAA Prot_ATP_ID_OB_C AAA_lid_3 AAA_16 AAA_2 AAA_22 AAA_5 RuvB_N PRS7_OB nSTAND3 Prot_ATP_ID_OB_N AAA_14 DUF815 AAA_7 AAA_11 TIP49 AAA_33 RNA_helicase TPR_MLP1_2 AAA_3 NPHP3_N Csa3_N AAA_18 Mg_chelatase bpMoxR DUF3829_2nd AAA_28 DUF5906 AAA_lid_PRS2_C TsaE AAA_24 NACHT ATPase AAA_25 Occludin_ELL AAA_17 ATPase_2 Parvo_NS1 IstB_IS21 DUF4140 Med4
Other DBs
NCBI-GeneID: 100474244
NCBI-ProteinID: XP_002929310
Ensembl: ENSAMEG00000005202
UniProt: G1LF38
LinkDB
Position
20:27646254..27667171
AA seq 403 aa
MAIPGIPYERRLLIMADPRDKALQDYRKKLLEHKEIDGRLKELREQLKELTKQYEKSEND
LKALQSVGQIVGEVLKQLTEEKFIVKATNGPRYVVGCRRQLDKSKLKPGTRVALDMTTLT
IMRYLPREVDPLVYNMSHEDPGNVSYSEIGGLSEQIRELREVIELPLTNPELFQRVGIIP
PKGCLLYGPPGTGKTLLARAVASQLDCNFLKVVSSSIVDKYIGESARLIREMFNYARDHQ
PCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDGFDTLHRVKMIMATNRPDTLD
PALLRPGRLDRKIHIDLPNEQARLDILKIHAGPITKHGEIDYEAIVKLSDGFNGADLRNV
CTEAGMFAIRADHDFVVQEDFMKAVRKVADSKKLESKLDYKPV
NT seq 1212 nt   +upstreamnt  +downstreamnt
atggccattcccggcatcccctatgagcgacggcttctcatcatggcggaccctagagat
aaggcgcttcaggactaccgcaagaagctgctggagcacaaggagattgacggccgtctc
aaggagttaagggaacaattaaaagaacttaccaagcagtatgaaaagtctgaaaatgat
ctgaaggccctacaaagtgttgggcagattgtaggtgaagtacttaagcaactaactgaa
gaaaaattcattgtgaaagctacaaatggaccaagatatgttgtgggctgtcgtcgacag
cttgataaaagtaagctgaagccaggaacaagagttgctttggatatgactacactaact
atcatgagatatttgccaagggaagtggatccattggtctacaacatgtctcatgaggac
cctgggaatgtttcttattctgagattggaggactgtcagaacagattcgggagttaaga
gaggtgatagaattacctcttacaaacccagaattattccagcgtgtaggaataatacct
ccaaaaggctgtttgttatatggaccaccaggcacaggaaaaacactcttggcacgagct
gttgctagccagctggactgcaatttcttaaaggttgtatctagttctattgtagacaag
tacattggtgaaagtgctcgtttgatcagagaaatgtttaattatgccagggatcatcaa
ccatgcattatttttatggatgaaatagatgctattggtggtcgtcggttttctgagggt
acttcagctgatagagagattcagagaactttgatggagttactaaatcaaatggatgga
tttgatactctacatagagttaaaatgatcatggctacaaacagaccagatacactggat
cctgctttgcttcgtccaggaagattagatagaaaaatacatattgatttaccaaacgaa
caagcaagattagatatattgaaaatccatgcaggtcccattacaaagcatggcgaaata
gattatgaagcaattgtgaagctttcagatggctttaatggagcagacctgagaaatgtt
tgtactgaagcaggtatgtttgcaattcgtgctgatcatgattttgtagtacaggaagac
ttcatgaaagcagtcagaaaagtggctgattctaagaagctagagtctaaattggactac
aaacctgtgtaa

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