Ailuropoda melanoleuca (giant panda): 100474262
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Entry
100474262 CDS
T01329
Symbol
RAD50
Name
(RefSeq) DNA repair protein RAD50 isoform X2
KO
K10866
DNA repair protein RAD50 [EC:3.6.-.-]
Organism
aml
Ailuropoda melanoleuca (giant panda)
Pathway
aml03440
Homologous recombination
aml03450
Non-homologous end-joining
aml04218
Cellular senescence
Brite
KEGG Orthology (KO) [BR:
aml00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
100474262 (RAD50)
03450 Non-homologous end-joining
100474262 (RAD50)
09140 Cellular Processes
09143 Cell growth and death
04218 Cellular senescence
100474262 (RAD50)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
aml03032
]
100474262 (RAD50)
03400 DNA repair and recombination proteins [BR:
aml03400
]
100474262 (RAD50)
DNA replication proteins [BR:
aml03032
]
Eukaryotic type
DNA Replication Termination Factors
MRN complex
100474262 (RAD50)
DNA repair and recombination proteins [BR:
aml03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
MRN(MRX) complex
100474262 (RAD50)
BRCA1-C complex
100474262 (RAD50)
NHEJ (non-homologous end-joining)
MRX complex
100474262 (RAD50)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
Rad50_zn_hook
AAA_21
SbcC_Walker_B
SMC_N
AAA_15
DUF2703
AAA_29
Motif
Other DBs
NCBI-GeneID:
100474262
NCBI-ProteinID:
XP_002913000
Ensembl:
ENSAMEG00000017712
UniProt:
G1MH82
LinkDB
All DBs
Position
3:21595014..21731464
Genome browser
AA seq
1312 aa
AA seq
DB search
MSRIEKMSILGVRSFGIEDKDKQIITFFSPLTILVGPNGAGKTTIIECLKYICTGDFPPG
TKGNTFVHDPKVAQETDVRAQIRLQFRDVNGELIAVQRSMVCTQKSKKTEFKTLEGVITR
TKHGEKVSLSSKCAEIDREMISSLGVSKSVLNNVIFCHQEESNWPLSEGKALKQKFDEIF
SATRYIKALETLRQVRQTQGQKVKECQTELKYLKQNKEKACEIRDQITNKEAQLTSSKEI
VKSYENELDPLKNRLKEIEQNLSKIMRLDNEIKALDSRKKQMEKDNSELEQKMEKVFQGT
DEQLNDLYHNHQRTVREKERRLVDCQREVEKLNKESRLLNQEKSELLVEQGRLQLQADRH
QEHIQARDSLIQSLAAQLELDGFERGPFSERHIKNFHRLVRERQEREAEIASQLMNDFAE
KETLKQKQIDEIRDKKIGLGRIIELKSEILSKKQNELRNVKYELQQLEGSSDRILELDQE
LSKAERELSKAEKNSNVEALKTEVISLQNEKADLDRTLRKLDQEMEQLNHHTTTRTQMEM
LTKDKADKDEQIRKIKSRHSDELTSLLGYFPNKKQLEDWLHSKSKEINQTRDRLAKLNKE
LASAEQNKNHINNELKRKEEQLSSYEDKLFDVCGSQDFENDLDRLKEEIEKSSKQRAMLA
GATAVYSQFITQLTDENQSCCPVCQRVFQTEAELQEVISDLQSKLRLAPDKLKSTESELK
KKEKRRDEMLGLVPVRQSIIDLKEKEIPELRNKLQNVNRDIQRLKNDIEEQETLLGTIMP
EEESAKVCLTDVTIMERFQMELKDVERKIAQQAAKLQGLDLDRTVQQVNQEKQEKQHKLD
TVSSKMELNRKLIQDQQEQIQHLKSTTNELKSEKLQISTNLQRRQQLEEQTVELSTEVQS
LFREIKDAKEQLSPLETTLEKFQQEKEELINKKNKSNKIAQDKMNDIKEKVKNIHGYMKD
IENYIQDGKDDYKKQKENELNKVMAQLSECEKHKENINTDMGIMRQDIDTQKIQERWLQD
NLTLRKRNEELKEVEEERKQHLKEMGQMQVLQMKNEHQKLEEKIDNIKRNHSLAIGRQKG
YEEEIIHFKRELREPQFRDAEEKYREMMIVMRTTELVNKDLDIYYKTLDQAIMKFHSMKM
EEINKIIRDLWRSTYRGQDIEYIEIRSDADENVSASDKRRNYNYRVVMLKGDTALDMRGR
CSAGQKVLASLIIRLALAETFCLNCGILALDEPTTNLDRENIESLAHALVEIIKSRSQQR
NFQLLVITHDEDFVELLGRSEYVEKFYRIKKNIDQCSEIVKCSVSSLGSYVH
NT seq
3939 nt
NT seq
+upstream
nt +downstream
nt
atgtcccggatcgaaaagatgagcattttgggcgtgcggagctttggaatagaggacaaa
gataagcaaattatcacttttttcagcccccttacaattttggttggacccaatggggcg
gggaagacgaccatcattgaatgtctgaaatatatttgtactggagattttcctcctgga
accaaaggaaatacatttgttcatgatcccaaggttgctcaagaaacagatgttagagcc
cagatccgtctgcagtttcgtgatgtcaatggagaacttatagctgtacagagatcgatg
gtgtgtactcagaaaagcaaaaagacagaatttaaaaccctggaaggagtcattactaga
acaaagcatggtgagaaggtcagtctcagctctaagtgtgcagaaattgaccgagagatg
ataagttctcttggggtttccaagtctgtgctgaataatgtcattttttgtcaccaagaa
gagtcgaattggcctttaagtgaaggaaaggccctgaagcaaaaatttgatgagattttt
tcagcaacaaggtacattaaagcgttggaaacgcttcggcaggtacgtcagacacaaggt
cagaaagtaaaagaatgtcaaacagaactaaaatatttgaagcaaaataaggaaaaagct
tgtgagatacgtgaccagattactaataaggaagcccagttaacatcatcaaaggaaatt
gtcaaatcctatgagaacgaacttgatccattgaagaatcgtctaaaagaaattgaacag
aatctctctaaaataatgagactcgacaatgagattaaagccttggatagccggaagaag
caaatggagaaagataatagtgaactggaacagaaaatggaaaaggtttttcaagggact
gatgagcaactaaatgatttatatcacaatcaccagagaacagtaagggagaaagaaagg
agactggtagactgtcagcgtgaagtggaaaagttaaataaagaatcaaggcttctcaat
caggaaaaatcagaactgcttgttgagcagggtcgtctgcagctacaagcagatcgccat
caagaacatatccaagctagagattcattaattcagtctttggcagcacagctagaattg
gatggctttgagcgtggaccattcagtgaaagacatattaaaaattttcacagacttgtg
agagagaggcaagaaagggaagcagaaattgccagccaactgatgaatgactttgcagaa
aaagagactctgaaacaaaaacagatagatgagataagagataagaaaattggactggga
agaataattgagctaaaatcagaaatcctaagtaagaagcagaatgagctgagaaatgtg
aagtatgaattacagcagttggaaggatcttcagaccggattcttgaactggaccaggag
ctctcaaaagctgaacgtgagctgagcaaggctgagaaaaacagcaatgtagaagctcta
aaaacagaagtaataagccttcaaaatgagaaagcagacctagacaggaccctgcgtaaa
ttggaccaggagatggaacagttaaaccatcatacaacaacacgcacccagatggagatg
ctgaccaaagacaaagccgacaaagatgaacaaatcagaaaaataaaatctagacacagt
gatgaattaacttcattgttaggatattttcccaacaaaaaacagctcgaagactggctt
catagtaaatcaaaagaaattaatcagaccagggacagacttgccaaactgaacaaagaa
ctagcttcagctgagcaaaataaaaatcatataaataatgaactaaaaaggaaagaagag
cagttgtccagttatgaagacaagctgtttgatgtttgtggtagccaggattttgaaaat
gacttagacaggcttaaagaagaaattgaaaaatcctcaaaacagcgggccatgctggct
ggagccacagcagtttactcccaattcattactcagctaacagatgaaaaccagtcatgt
tgtcctgtctgtcagagggtttttcagacagaagctgaattacaggaagtcatcagtgat
ttgcagtctaagctgcggcttgctccagataaactgaaatcaacagaatcagaactaaag
aaaaaagaaaagcggcgtgacgaaatgctgggacttgtccctgtgaggcaaagcataatt
gatttgaaggagaaggaaataccagaattaagaaacaaactgcagaatgtcaatagagac
atacagcgcttaaagaatgacatagaggaacaggaaactctcttgggcaccataatgcct
gaagaagaaagtgctaaagtctgcctgacagatgttacaattatggagaggttccagatg
gagctcaaagatgttgaaagaaaaattgcacagcaagcagctaagctgcaaggactagac
ttggatagaactgttcaacaagtaaaccaggaaaaacaagagaaacaacacaaattagat
acagtttccagtaagatggaattgaatcgcaagcttatacaggaccagcaggaacagatt
caacatctaaaaagtacaacaaatgaacttaaatcagagaaacttcagatatctactaat
ttacaacgtcgtcagcaactagaggagcagactgtggaattatccactgaagttcagtcc
ttattcagagagataaaggatgccaaagagcagttaagccctttggaaacaacattggaa
aagttccagcaggaaaaagaagaattaatcaacaagaaaaataaaagcaacaaaattgcc
caggataaaatgaatgatatcaaagaaaaggttaaaaatattcatggttatatgaaagac
attgagaattatattcaggatggaaaagatgactataagaagcaaaaagaaaatgaactt
aataaagtaatggctcaactaagtgaatgtgagaaacacaaagaaaatataaatacagat
atgggaatcatgagacaagatattgatacacagaagatacaagagagatggctacaggat
aaccttactttaagaaaaagaaatgaggaactaaaagaagttgaagaagaaagaaaacag
catttgaaggaaatgggtcaaatgcaggttttacaaatgaagaatgaacatcagaagctg
gaagaaaaaatagacaatataaaaagaaatcacagtttggcaatagggcgacagaaaggt
tatgaggaagaaattattcattttaagagagaacttcgagagcctcaatttcgggatgcg
gaggaaaagtacagagaaatgatgattgttatgagaacaacagagcttgtgaacaaggat
ctggacatttattataagacccttgatcaagcaatcatgaaatttcacagtatgaaaatg
gaagaaatcaacaaaattattcgtgacctttggcgaagtacctatcgtggacaagatatt
gaatacatagaaattcggtctgatgccgatgaaaatgtatcagcctctgataaaaggcgg
aattataactatcgcgtggtgatgctaaagggagacacagccttggacatgcgagggcga
tgcagtgctggacaaaaggtgttagcctccctcatcattcgcttggccttggctgaaacg
ttctgcttgaactgtggcatccttgccctggatgagccaaccacaaaccttgaccgagaa
aacattgagtctcttgcacacgctctcgttgagataatcaagagtcgctcacagcagcgt
aacttccagcttctggtcatcactcacgatgaagattttgtggagctcttaggccgttcc
gaatatgtggagaaattctacaggattaagaagaacattgatcagtgctcagagattgtg
aaatgtagtgttagctccctgggttcttatgttcattaa
DBGET
integrated database retrieval system
