KEGG T01329: 100474413

Ailuropoda melanoleuca (giant panda): 100474413

Entry

100474413         CDS       T01329

Symbol

POLR2D

Name

(RefSeq) DNA-directed RNA polymerase II subunit RPB4

K03012

DNA-directed RNA polymerase II subunit RPB4

Organism

aml Ailuropoda melanoleuca (giant panda)

Pathway

aml03020

RNA polymerase

aml03420

Nucleotide excision repair

aml05016

Huntington disease

Brite

KEGG Orthology (KO) [BR:aml00001]
09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    100474413 (POLR2D)
  09124 Replication and repair
   03420 Nucleotide excision repair
    100474413 (POLR2D)
09160 Human Diseases
  09164 Neurodegenerative disease
   05016 Huntington disease
    100474413 (POLR2D)
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:aml03021]
    100474413 (POLR2D)
   03400 DNA repair and recombination proteins [BR:aml03400]
    100474413 (POLR2D)
Transcription machinery [BR:aml03021]
Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol II specific subunits
     100474413 (POLR2D)
DNA repair and recombination proteins [BR:aml03400]
Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      100474413 (POLR2D)

SSDB

Motif

Pfam:

RNA_pol_Rpb4 Maelstrom Tfb4

Other DBs

NCBI-GeneID:

100474413

NCBI-ProteinID:

XP_002927746

UniProt:

D2HY08

LinkDB

Position

2:92357516..92368814

AA seq 142 aa
MAAGGSDPRAGDVEEDASQLIFPKEFETAETLLNSEVHMLLEHRKQQNESAEDEQELSEV
FMKTLNYTARFSRFKNRETIASVRSLLLQKKLHKFELACLANLCPETAEESKALIPSLEG
RFEDEELQQILDDIQTKRSFQY

NT seq 429 nt +upstreamnt +downstreamnt
atggcggctggcggtagcgacccgcgggccggcgacgtagaagaggacgcctcacagctt
atcttccccaaagagtttgaaacagctgagacgctactaaattcagaagttcatatgctt
ctggagcatcgaaagcaacagaatgagagtgcagaggatgaacaggaactttctgaggtc
ttcatgaaaactttaaattacacagcccgtttcagtcgtttcaaaaacagagagaccatt
gccagtgtccgtagcttgttgctccagaagaagcttcataagtttgagttggcctgtttg
gccaacctttgcccagagactgctgaggagtcaaaggcattgatcccaagcctggagggg
cggtttgaagatgaggagctacagcagattcttgatgatatccagaccaagcgcagcttt
caatattaa

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