Entry |
|
Symbol |
TGFBRAP1
|
Name |
(RefSeq) transforming growth factor-beta receptor-associated protein 1
|
KO |
K20177 | vacuolar protein sorting-associated protein 3 |
|
Organism |
aml Ailuropoda melanoleuca (giant panda)
|
Pathway |
|
Brite |
KEGG Orthology (KO) [BR:aml00001]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
100474432 (TGFBRAP1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:aml04131]
100474432 (TGFBRAP1)
Membrane trafficking [BR:aml04131]
Endosome - Lysosome transport
Tethering complex
CORVET complex
100474432 (TGFBRAP1)
|
SSDB |
|
Motif |
|
Other DBs |
|
LinkDB |
|
Position |
4:61958819..62000430
|
AA seq |
859 aa
MMSTKAFTLVSAVEWELLAGDKERVHIECVECCGKNLYVGTGDCVVYHFLLEERALPTGT
ATFSATKQLHRHLGFRKPVNELRAASALNRLLVLCDNSITLVNMMSLEPVPSGARIKGAA
ALALNENPVNGDPFCVEVCIISVKRRTIQLFLVYEDRVQIVREVSTPEQPLAVAVDGHFL
CLALTTQYIILNYNTGFSQDLFPYCSEEKRPIVKRIGRQEFLLAGPGGLGMFATVAGISQ
RAPVHWSENVIGAAICFPYVIALDDEFITVHSMLDQQQKQTLPFKEGHILQDFEGRVIVA
TSKGVYILVPLPLEKQIQDLLASHRVEEALVLAKGARRNIPKEKFQVMYRRILQQAGFIQ
FAQLQFLEAKELFRSGQLDVRELISLYPFLLPTSSSFTRSHPPLHEYADLNQLTQGDQEK
MAKCKRFLMSYLNEVRSTEVANGYKEDIDTALLKLYAEADHDSLLDLLVTENSCLLTDSA
AWLEKHNKYFALGLLYHYNNQDAAAVQLWVNIVNGDIHDSTRSDLYEYVVDFLTYSLDQE
LVWKYADWVLQKSEEVGVQVFTKRPLDKQQNSFNPDSVITCLKKYSKALVKYLEHLVIDR
RLQKEEYHTQLALLYLDEVLRQRSGADSGAAEATEAQLKLRHLLQESDLYRVHLLIDRIR
GAGLPMESAILHGKLEEHEEALRILVHELRDFPAAEDYCLWRSEGRDPPYRQRLFHTLLA
MYLQPGPAAPELTVAATDLLNHHAADFDAARVLPLLPGSWSVQLLHPFLTGAVRSSVHAR
RTTQVALGLAKSENLIYKYDKMKLKGSSVQLSDKKVCQMCQNPFCEPVFVRYPNGGLVHT
HCATSRHTNPSSPGPGART |
NT seq |
2580 nt +upstreamnt +downstreamnt
atgatgagcaccaaggccttcacgttggtctctgccgtggagtgggagctgctggcaggc
gacaaggagcgggtgcacatagagtgcgtggagtgctgcgggaagaacctctacgtgggc
accggtgactgcgtcgtctaccacttcctgttggaggagcgggcgctgcccaccgggacg
gccaccttctccgccaccaagcagctgcaccgacacctgggcttccggaagccagtgaac
gagctgcgagcggcctcggccctcaacaggctgctggtgctctgtgacaactccatcacc
ctggttaacatgatgagcctggagcccgtgccctcgggggcgcgcatcaaaggggccgcg
gcgctggccttgaacgagaaccctgtgaacggagacccgttctgcgtggaagtctgcatc
atctcggtcaagcgcaggaccatccagctgttcctggtgtacgaggaccgggttcagatc
gtcagggaggtgtccacgccggagcagcccctggccgtggccgtggacggccacttcctg
tgcctggctctgaccacgcagtacatcatcctgaactacaacacgggcttctcccaggac
ctgtttccttactgcagcgaggagaagcgccccatcgtcaagaggatcgggagacaggag
ttcctcctggcaggtcccggaggactgggcatgtttgccacagttgctggcatatctcag
cgagcccctgtgcactggtcagagaatgtgatcggggcggccatttgcttcccgtatgtc
atagcgctcgatgatgaattcatcacggtgcacagcatgttggaccagcagcaaaagcag
accctgccctttaaggaaggacacattctacaggatttcgaaggaagagtgattgtcgcc
acaagtaaaggagtttacatcttggttccgttacccctggaaaagcaaatacaggatctt
ctagcaagccatagagtggaagaggctttggttttagcaaaaggagcccggaggaacatt
ccaaaagaaaaatttcaggtaatgtacaggaggattctgcaacaggccgggtttatacag
tttgcacaacttcagttcctggaagctaaagagctcttcagaagcggccagcttgacgtc
cgggagctgatctctctctaccccttcctgttgcccacctcctcctcattcacacggtcc
caccctcctctccacgagtacgcagacctgaaccagctgacccagggggaccaggagaag
atggccaagtgtaagcgctttctcatgagctacctgaacgaggtccgcagcacagaggtc
gccaatggctacaaagaggacatcgacacggccttgctcaagctgtacgcggaggccgac
cacgacagcctcctggacctcctggtcaccgagaactcctgtcttctaacggacagcgct
gcctggctagagaagcacaacaagtattttgcactcggactgctctatcattataataat
caagatgcggctgccgtccagctctgggtgaacatcgtgaatggggacattcatgactcc
actcgctcggacctatatgaatatgtcgtcgacttccttacctacagcttagaccaggaa
ctcgtgtggaagtatgccgattgggtcctgcagaaaagtgaagaggttggagttcaggtt
ttcaccaagagacctttggacaagcagcagaacagtttcaatccggacagtgtgatcact
tgccttaagaaatactctaaagcccttgtcaagtacctggagcatctcgtcatagacagg
aggctgcagaaggaggagtaccacacgcagctggccctcctctacctggacgaggtgctg
cggcagaggtccggcgccgacagcggggctgcagaagccacggaggcacagctgaagctt
cggcacctgctccaggagtccgatttgtaccgagtccacttgctgatagatagaatccgg
ggtgcggggctccccatggagagcgccatcctgcacgggaagctggaggagcacgaggag
gccctgcgcatcctggtgcacgagctgcgggacttcccggcggccgaggactactgcctg
tggcgctccgagggcagggacccaccgtaccggcagcggctcttccacacactgctggcc
atgtacctccagcccggccccgccgcgcccgagctgaccgtggccgccacagacctcctg
aaccaccacgcggccgacttcgacgccgcccgggtcctgccgctgctgccgggcagctgg
tcggtgcagctcctgcacccgttcctgaccggggccgtcaggagcagcgtgcatgcccgc
aggaccactcaggtggctctgggcctggccaagtccgaaaacctgatctacaagtacgac
aagatgaagttgaaaggaagctcagttcagctctcggacaaaaaggtctgccagatgtgc
caaaatcccttttgtgagcctgtgtttgttagatatccaaatggtgggctcgtccacacc
cattgtgccaccagcagacacacgaaccccagctcccctggccccggcgctcggacttga |