Ailuropoda melanoleuca (giant panda): 100474456
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Entry
100474456 CDS
T01329
Symbol
CHD1
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 1 isoform X1
KO
K11367
chromodomain-helicase-DNA-binding protein 1 [EC:5.6.2.-]
Organism
aml
Ailuropoda melanoleuca (giant panda)
Brite
KEGG Orthology (KO) [BR:
aml00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
aml03021
]
100474456 (CHD1)
03036 Chromosome and associated proteins [BR:
aml03036
]
100474456 (CHD1)
Transcription machinery [BR:
aml03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
100474456 (CHD1)
Chromosome and associated proteins [BR:
aml03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
SAGA complex
100474456 (CHD1)
SLIK complex
100474456 (CHD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
CDH1_2_SANT_HL1
CHD1-like_C
Helicase_C
Chromo
DEAD
Motif
Other DBs
NCBI-GeneID:
100474456
NCBI-ProteinID:
XP_034512447
Ensembl:
ENSAMEG00000014644
LinkDB
All DBs
Position
3:complement(70652006..70721613)
Genome browser
AA seq
1796 aa
AA seq
DB search
MNGHSDEESVRNSSGESSQSDDDSGSASGSGSGSSSGSSSDGSSSQSGSSDSESGSESGS
QSESESDTSRENKVQAKPPKVDGAEFWKSSPSILAVQRSAMLKKQQQQQRQASSNSGSEE
DSSSSEDSDDSSNEVKRKKHKDEDWQMSGSGSPSQSGSDSESEEERDKSSCDETESDYEP
KNKVKSRKPQNRSKAKNGKKILGQKKRQIDSSEEEDDEEDYDNDKRSSRRQATVNVSYKE
DEEMKTDSDDLLEVCGEDVPQPEEEEFETIERFMDCRIGRKGATGATTTIYAVEADGDPN
AGFEKNKEPGEIQYLIKWKGWSHIHNTWETEETLKQQNVRGMKKLDNYKKKDQETKRWLK
NASPEDVEYYNCQQELTDDLHKQYQIVERIIAHSNQKSAAGYPDYYCKWQGLPYSECSWE
DGALISKKFQACIDEYFSRNQSKTTPFKDCKVLKQRPRFVALKKQPSYIGGHESLELRDY
QLNGLNWLAHSWCKGNSCILADEMGLGKTIQTISFLNYLFHEHQLYGPFLLVVPLSTLTS
WQREIQTWASQMNAVVYLGDINSRNMIRTHEWMHPQTKRLKFNILLTTYEILLKDKAFLG
GLNWAFIGVDEAHRLKNDDSLLYKTLIDFKSNHRLLITGTPLQNSLKELWSLLHFIMPEK
FSSWEDFEEEHGKGREYGYASLHKELEPFLLRRVKKDVEKSLPAKVEQILRMEMSALQKQ
YYKWILTRNYKALSKGSKGSTSGFLNIMMELKKCCNHCYLIKPPDNNEFYNKQEALQHLI
RSSGKLILLDKLLIRLRERGNRVLIFSQMVRMLDILAEYLKYRQFPFQRLDGSIKGELRK
QALDHFNAEGSEDFCFLLSTRAGGLGINLASADTVVIFDSDWNPQNDLQAQARAHRIGQK
KQVNIYRLVTKGSVEEDILERAKKKMVLDHLVIQRMDTTGKTVLHTGSAPSSSTPFNKEE
LSAILKFGAEELFKEPEGEEQEPQEMDIDEILKRAETHENEPGPLTVGDELLSQFKVANF
SNMDEDDIELEPERNSKNWEEIIPEDQRRRLEEEERQKELEEIYMLPRMRNCAKQISFNG
SEGRRSRSRRYSGSDSDSISERKRPKKRGRPRTIPRENIKGFSDAEIRRFIKSYKKFGGP
LERLDAIARDAELVDKSETDLRRLGELVHNGCIKALKDNSSGTERTGGRLGKVKGPTFRI
SGVQVNAKLVISHEEELIPLHKSIPSDPEERKQYTIPCHTKAAHFDIDWGKEDDSNLLIG
IYEYGYGSWEMIKMDPDLSLTHKILPDDPDKKPQAKQLQTRADYLIKLLSRDLAKKEAQR
LSGAGGSKRRKARAKKNKAMKSIKVKEEIKSDSSPLPSEKSDEDDDKDEITSVKHPNKKI
KTERDSEERPEPDVFIKKESEEKREAKEKENKRELKREIKEKEDKKDIKEKDFKEKRENK
VKEAIQKEKDIKEEKLSESKSDSKERSKKSSASDAPVHITASGEPVPISEESEELDQKTF
SICKERMRPVKAALKQLDRPEKGLSEREQLEHTRQCLIKIGDHITECLKEYTNPEQIKQW
RKNLWIFVSKFTEFDARKLHKLYKHAIKKRQESQQSNDQNSNLNAQVIRNPDVERLKENT
NHDDSSRDSYSSDRHLSQYHDHHKDRHQGDSYKKSDSRKRPYSSFSNGKDHRDWDHYKQE
SRYYSDREKHRKLDDHRSRDHRSNLEGGLKDRSHSDHRSHSDHRLHSDHRASSEYTHHKS
SRDYRYHSDWQMDHRASSSGPRSPLDQRSPYGSRSPFEHSIEHKSTPEHTWSSRKT
NT seq
5391 nt
NT seq
+upstream
nt +downstream
nt
atgaatggacacagtgatgaagaaagtgttagaaacagtagtggagaatcaagccagtcg
gatgatgattctgggtcagcctcaggctcaggatctggttcaagttctggaagcagtagt
gatggaagcagtagccagtcaggtagcagtgactctgaatctggatctgaatccggcagt
cagtcagagtcggaatcagacacgtcccgagaaaacaaagtccaagcaaaaccaccgaaa
gttgatggagctgagttttggaaatctagccctagtattctggccgttcagagatctgca
atgctcaagaagcagcagcagcagcagcggcaggcttcatctaatagtggatcagaggag
gattcctccagcagtgaagattctgatgactcatcgaatgaggtcaaaaggaaaaagcat
aaagatgaagattggcaaatgtctgggtcaggatctccatctcaatctggttcagattca
gaatctgaagaagaaagagataaaagcagttgtgatgagacagaatctgattatgagcca
aaaaacaaagttaaaagcagaaaacctcaaaatagatctaaggcaaaaaatgggaagaaa
attcttggacaaaaaaagagacagattgattcatctgaggaggaagatgatgaagaagat
tatgataatgataaaagaagttctcgtcgccaagcaactgtcaatgttagctataaagaa
gatgaagaaatgaaaacagattctgatgatctgctggaagtctgtggagaagatgttcct
caacctgaggaagaggaattcgaaacaatagaacgatttatggattgtcgaattgggaga
aaaggagctactggtgctactacaaccatctatgcagttgaagcagatggtgacccaaat
gcaggatttgaaaaaaataaggaaccaggcgagatccaatatttaattaaatggaaagga
tggtcccatattcacaatacttgggagacagaagaaacccttaagcagcagaatgttaga
ggaatgaaaaaattggataattataagaaaaaagatcaggaaacaaaaagatggttgaaa
aatgcttctccagaagatgtggagtattataactgccagcaagaacttacggatgatcta
cacaaacagtatcaaatagtggaacgaataattgctcattccaatcagaagtcagcagct
ggttatcctgattattattgcaaatggcagggccttccatactcagagtgcagctgggag
gatggagctctaatttccaaaaagtttcaagcatgcatagatgagtattttagcaggaat
caatcaaaaaccactccttttaaagattgcaaagtattaaaacaaaggccaagatttgta
gccctaaagaagcagccatcctatattggaggacatgagagtttagaattaagagattat
caactgaatggtttaaattggcttgctcactcttggtgcaaaggaaatagttgcatactt
gctgatgaaatgggccttggaaaaacaatacagactatctcatttctgaactacttgttt
catgaacatcaattatatggaccttttctgttagtagtaccactctccactcttacttcc
tggcaaagggaaattcagacatgggcttctcagatgaatgctgtggtttatttaggtgac
attaacagcagaaatatgataagaactcatgaatggatgcatccccagaccaaacggtta
aaatttaatatacttttaacaacttacgaaattttattgaaggataaggcattccttgga
ggtctaaattgggcgtttataggtgtagatgaagcacatcgattaaagaatgatgactct
cttctgtataaaactttaatagactttaagtccaatcaccgtctccttattactggaact
ccactacaaaactccctcaaagagctctggtctttgctacatttcattatgccagaaaag
ttttcttcttgggaagattttgaagaagaacatggaaaaggcagagaatatggttatgca
agcctccacaaggagcttgagccgtttctgttacgcagagttaaaaaagatgtggaaaaa
tctcttcctgccaaggttgagcagattttaagaatggaaatgagtgctttacagaaacag
tattacaaatggatattaactaggaattacaaagccctcagcaaaggttccaagggcagt
acctcaggctttttgaacattatgatggagctaaagaaatgttgtaaccattgctacctc
attaaaccaccagataataatgaattctataataaacaggaggccttacaacacttaatc
cgtagtagcggaaaattgattcttcttgacaaactgttaattcgcctgagagaacgaggc
aatagagttcttattttttctcaaatggtgcggatgttagatatacttgcagaatattta
aaataccgtcaattcccctttcaaagattagatggatcaataaaaggggagctgagaaaa
caagctctagatcattttaatgctgaaggatcagaggatttctgctttttgctttccaca
agagctggaggcttgggaattaatttagcttctgctgacactgttgttatatttgattct
gattggaatccacaaaatgatcttcaggcacaggctagagctcatcgaattgggcagaag
aaacaggtgaatatttatcgtctagttacgaagggatcagttgaagaggatatacttgaa
agggccaaaaagaagatggttttagatcacctcgtgattcagagaatggacacaactggg
aagacggtactacatacaggttctgccccctcaagttctactcctttcaataaagaagaa
ttgtcagccattttaaagtttggcgctgaggaactttttaaggaacctgaaggagaagaa
caagagccccaggaaatggatatagatgaaatcttgaagagggctgaaactcatgaaaac
gaaccaggccctttaactgtaggagatgaattgctttcccagttcaaggttgccaacttt
tcaaatatggatgaggatgacattgagttggaaccagaaagaaattcaaagaattgggaa
gaaataattccagaagatcaaagaagacgattagaagaggaagaaagacaaaaggaactt
gaagaaatttatatgctcccaagaatgagaaactgtgcaaaacagattagttttaatgga
agtgaagggaggcgcagtagaagtaggagatattctggatctgatagtgactcgatctca
gaaaggaaaaggccaaagaaacgtggaagaccacggactattcctcgagagaatatcaaa
ggatttagtgacgcagaaattcggcggtttatcaagagttacaagaaatttggtggccct
ctggaaagattagatgcaattgctcgggatgctgaattagttgataagtcagagacagac
ctcagacgactaggagaattggtacataatggttgcattaaagctttaaaagataattct
tcaggaacagaacgaacaggtggtagacttggaaaagtgaaaggtccaacattccgaata
tcaggagtacaggtgaatgccaagcttgtcatctcccatgaagaagaattaataccattg
cacaaatccattccttcagatccagaagaaagaaagcagtacactatcccatgccacaca
aaggcagctcattttgatatagactggggcaaagaagatgattccaatttgttaattggt
atctacgaatatggatatggaagctgggaaatgattaaaatggatcctgacctcagttta
acacacaagattcttccagatgatcctgataaaaaaccacaagcaaagcagttgcagaca
cgtgcagactacctcatcaaattacttagtagagatcttgcaaaaaaagaagctcagaga
ctttctggtgcaggagggtcaaagaggagaaaagcaagagctaagaagaataaagcaatg
aagtctataaaagtgaaagaagaaataaagagtgattcttcgcccctgccttcagagaaa
tctgatgaagatgatgataaggatgagatcacttctgtgaaacatccaaataaaaaaatt
aaaacagaaagagacagtgaagaaagacctgagccagatgtttttataaagaaggaatca
gaagaaaagagggaagcaaaagaaaaagagaataaaagagaacttaaaagggagataaaa
gaaaaagaggataagaaagatataaaggaaaaagattttaaagagaaaagagaaaacaaa
gtaaaagaagctatacagaaagaaaaagacataaaggaagaaaagttgagcgaatccaag
tctgatagcaaggaaagatccaagaaatcttcagcgtcagatgctccagttcatataacc
gcaagtggtgaaccagttcccatatctgaagaatctgaagagctagatcagaagacgttc
agcatttgtaaagaaaggatgaggcctgtcaaagcagctttgaaacaacttgataggcct
gaaaaaggcctttcagaaagagaacaactggagcatactcgacagtgtttaataaaaatt
ggagaccatatcacagaatgtctgaaagagtatacaaatcctgaacaaatcaagcagtgg
agaaaaaacctgtggatttttgtatctaagtttacggagtttgatgcaagaaaattacat
aaattatataaacatgctattaaaaaacggcaggaatctcagcaaagtaatgaccagaac
agcaacttgaatgctcaagtgattagaaatccagacgtggaaagattaaaagagaataca
aatcatgatgatagcagcagggacagttattcatctgatagacacttatctcagtatcat
gatcatcataaagaccgacatcagggagattcttacaaaaagagtgactctaggaaaaga
ccctattcttcttttagtaatggtaaagatcatcgtgactgggatcattacaagcaagaa
agcaggtattacagtgatagagagaaacacagaaaactggatgatcacaggagtagagat
cacaggtcaaatttggaaggaggtttaaaggatagatctcattctgatcatcgttctcat
tcagatcatcggttacattcagaccatcgggcaagttctgaatatacacaccataaatcg
tccagggattataggtatcactcagattggcaaatggaccacagagcttccagtagtggc
cccagatcaccactagatcagagatctccttatggctccagatctccatttgaacactca
attgaacacaaaagtacacctgagcatacctggagtagtcggaaaacataa
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integrated database retrieval system
