Ailuropoda melanoleuca (giant panda): 100474688
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Entry
100474688 CDS
T01329
Symbol
VPS52
Name
(RefSeq) vacuolar protein sorting-associated protein 52 homolog isoform X1
KO
K20298
vacuolar protein sorting-associated protein 52
Organism
aml
Ailuropoda melanoleuca (giant panda)
Brite
KEGG Orthology (KO) [BR:
aml00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
aml04131
]
100474688 (VPS52)
Membrane trafficking [BR:
aml04131
]
Protein recycling
Others
EARP complex
100474688 (VPS52)
Endosome - Golgi transport
Tethering complex
GARP complex
100474688 (VPS52)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps52_C
Vps52_CC
Sec3_CC
Sec3_C-term
COG6_N
Dor1
ATG16
Motif
Other DBs
NCBI-GeneID:
100474688
NCBI-ProteinID:
XP_002914378
Ensembl:
ENSAMEG00000001640
UniProt:
G1L4D9
LinkDB
All DBs
Position
5:complement(28448763..28466751)
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AA seq
723 aa
AA seq
DB search
MAAAATMAAAARELMLRAGTSDMEEEEGPLGGGPGLQEPLQLGELDISSDEFILDEVDVH
IQANLEDELVKEALKTGVDLRHYSKQVELELQQIEQKSIRDYIQESENIASLHNQITACD
AVLERMEQMLGAFQSDLSSISSEIRTLQEQSGAMNIRLRNRQAVRGKLGELVDGLIVPSA
LITAILEAPVTEPRFLEQLQELDAKAAAVREQEARGTAACADVRGILDRLRVKAVTKIRE
FILQKIYSFRKPMTNYQIPQTALLKYRFFYQFLLGNERATAKEIRDEYVETLSKIYLSYY
RSYLGRLMKVQYEEVAEKDDLMGVEDTAKKGFFSKPSLRSRNTIFTLGTRGSVISPTELE
APILVPHTAQRGEQRYPFEALFRSQHYALLDNSCREYLFICEFFVVSGSAAHDLFHAVMG
RTLGMTLKHLESYLTDCYDAIAVFLCIHIVLRFRNIAAKRDVPALDRYWEQVLALLWPRF
ELILEMNVQSVRSTDPQRLGGLDTRPHYITRRYAEFSSALVSINQTIPNERTMQLLGQLQ
VEVENFVLRVAAEFSSRKEQLVFLINNYDMMLGVLMERAADDSKEVESFQQLLNARTQEF
IEELLSPPFGGLVAFVKEAEALIERGQAERLRGEEARVTQLIRGFGSSWKSSVESLSQDV
MRSFTNFRNGTSIIQGALTQLIQLYHRFHRVLSQPQLRALPARAELINIHHLMVELKKHK
PNF
NT seq
2172 nt
NT seq
+upstream
nt +downstream
nt
atggccgctgctgcgaccatggcggcagctgcccgagagctaatgttgcgagccgggacc
tcagatatggaggaggaggagggcccgctggggggtggtcctgggcttcaggagccatta
caacttggagaattggacatctcctctgatgaattcatcctggatgaagtggatgttcac
attcaggcaaatctggaggatgagttagtaaaggaagctcttaaaacgggtgtggatctc
cgtcactattcaaagcaggttgagctggagctacagcagattgagcagaaatccatccgg
gattatatccaagagagtgagaacatagcgtctctacacaaccaaatcacagcctgtgat
gctgttcttgagcgcatggagcagatgttgggagcttttcagagtgacctcagctctatc
agctctgagatccggacactgcaggaacagtcaggagccatgaacattcggcttcgaaac
cgccaggcagttcggggaaaacttggggaacttgtcgatggtctgatagtgccctctgct
ctgatcacggcaattctggaggcaccagtgacagagcccaggttcctggagcagctgcaa
gagctggatgccaaggcagctgcagtccgagagcaggaggctagagggacggcagcctgt
gccgacgtcagaggcatcctcgaccggctccgggtcaaggcggtgacaaagatccgagag
ttcatccttcagaagatttattccttcagaaaaccaatgaccaactatcagatcccccag
acggccctgctgaagtacaggttcttctatcagtttctgctaggcaatgaacgagcaaca
gcaaaggagatcagggatgagtatgtggaaacactgagcaagatctacctgtcttactat
cgctcttacctggggcggctcatgaaggtgcagtacgaggaagtcgctgagaaggatgat
ctaatgggtgtagaagatacagcaaagaaaggattcttttcgaagccatccctccgcagc
aggaacaccatcttcaccctggggacccgtggttctgtcatctcccccactgaactggag
gcccccatcctggtgccccacactgcccagcggggagaacagaggtatccattcgaggcc
ctcttccgcagccagcactacgctctcctagacaattcctgccgtgaatatcttttcatc
tgtgaattctttgttgtgtctggctcggctgcacacgacctcttccatgctgtcatgggt
cgcacactcggcatgaccctgaaacacctggaatcctatctcacggactgctatgatgcc
atcgctgttttcctctgtatccacattgtccttcggttccgcaacattgcagcgaagagg
gatgttcctgccctggacaggtactgggagcaggttcttgccttgctgtggccacgattt
gagctgatcctggagatgaatgtccagagtgtccgaagcactgaccctcagcgccttggg
gggctggatactcggccccactatatcacacgccgatatgcagagttctcatctgcgctt
gtcagcatcaatcagacaattcccaatgaacggacaatgcagctgctgggacagctacag
gtggaagtggagaattttgtcctccgagtggcagccgagttctcctcaaggaaggagcag
cttgtgtttctgatcaacaactatgacatgatgttgggcgtgctgatggagcgggctgca
gatgacagcaaggaggttgagagtttccagcagctgctcaatgctcggacacaggaattc
attgaagagttattgtctcccccttttgggggtctggtggcatttgtgaaggaagctgag
gctttgattgagcgtggacaggctgagcgacttcgaggggaagaagcccgggttactcag
ctgatccgtggctttggcagttcctggaaatcatcagtggagtctctgagtcaggatgta
atgcggagtttcaccaacttcagaaatggaaccagtatcatccagggagctttgacccag
ctgatccagctctatcatcgcttccaccgggtgctctctcagccccagctccgagctctc
cctgcccgggctgagctcatcaacattcatcaccttatggtggagctcaagaagcacaag
cccaacttctga
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