Ailuropoda melanoleuca (giant panda): 100474842
Help
Entry
100474842 CDS
T01329
Name
(RefSeq) putative short transient receptor potential channel 2-like protein
KO
K04965
transient receptor potential cation channel subfamily C member 2
Organism
aml
Ailuropoda melanoleuca (giant panda)
Brite
KEGG Orthology (KO) [BR:
aml00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
aml04040
]
100474842
Ion channels [BR:
aml04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
100474842
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
XRCC1_N
TRP_2
Ion_trans
PKD_channel
Ank_2
Ank
YVC1_C
Motif
Other DBs
NCBI-GeneID:
100474842
NCBI-ProteinID:
XP_034523493
LinkDB
All DBs
Position
8:56246158..56285184
Genome browser
AA seq
1317 aa
AA seq
DB search
MAPVNISHVVSFSSQDPKYPVENLLNPDSQRGPWLSCPQDKSGQLKVELQLERAVPIGYI
DVGNCGCAFLQIDVGRSSWSLDRPFVTLLPATMLMSLADSKQGKNRSGVRMFKDDDFLAP
ASGESWDRLRLTCSQPFTRQQSFGLAFLRVCSSLDSLDDPVRGSLAPENSRLSQGSDAQE
SGPSPWLANPSIRRTFFPDPQTSTKEISELKNILKQLQPGALGRSARMVLSAARRVPPAS
MAGAKTSPKEAGPSQPASTELRSVEQNSENDVSRTKRRKVQARRPLSSSNLRSNQRGMAK
AGQRQHHRPQAQSNGVQESAPCPICAVSFSIEVLAWHAATCGEISPPQPASRSPPPSSSR
SVLCVSSPESSPPASRVQCPLCQLYFSAGEVEEHASVCGEVPQMYDQKGGGGPKAKEVRD
GGRGGVPPSPSFIQPQPTWTEIVNKKLRFPPLLLAAIQEGRLGLVQQLLESGVEASGSGP
SRLLRNVEEAEDRSWREALNLAIQLGHEAITDVLLANVKFDFRQIHEALLVAVDTNQPAA
VQRLLARLEREKGRKVDTRSFSLAFFDSSIDGSRFAPGVTPLTLACQKDLYEIAQLLMDQ
GHTIARPHPVSCACLECSNARRYDLLKFSLSRINTYRGMASRAHLSLASEDAMLAAFQLS
RELRRLARKEPEFKPEYIALESLSQDYGFELLGMCRNQSEVTAVLNDQGEDNETEPEAEG
LGQAFEEGIPNLARLRLAVNYNQKRFVAHPICQQVLSSIWCGNLAGWRGSTTIWKLFVAF
LIFLTMPFLCLGYWLAPKSRLGRLLKIPVLKFLLHSASYLWFLLFLLGESLAMETQLSTF
RGRSQSIWETSLHMVWVTGFLWFECKEVWIEGLRSYFLDWWNFLDMVILSLYLAAFALRL
LLAGLAHVHCQDAPSGAACHYFTTAERSEWHTEDPQFLAEVLFAVTSMLSFTRLAYILPA
HESLGTLQISIGKMIDDMIRFMFILMIVLTAFLCGLNNIYVPYQETERLGSFNETFRFLF
WTMFGMEEHSVVDMPQFLVPEFVGRALYGIFTIVMVIVLLNMLIAMITNSFQKIEDDADV
EWKFARSKLYLSYFREGLTLPVPFNVLPSPKGLFYLLRKIFRFICCCCSCCRTEKPDYPP
IPIYANPRAGAGPGEGQHVSYRLRVIKALVQRYIETAQREFEETRRKDLGNRLTELTKTV
SRLQSEVAGVRRILAEGGTPQPPEGASILSRYITRVRNSFQTVGPPIPETPELTVSGIVG
TQVPSETGLQDAGGARTPASGEPGPSSPAHALVHREQESEAAGDLPQEEDLGIKRGS
NT seq
3954 nt
NT seq
+upstream
nt +downstream
nt
atggctcctgtaaacattagccacgtggtatcattttcctctcaggatcccaagtatcct
gtggagaacttgctgaacccagacagtcagaggggaccttggctcagctgtcctcaggac
aagagtgggcaactgaaagtagaactccaactggagagggcagtgcccattggctacatt
gatgtgggtaactgtggctgtgctttcctgcaaattgatgtgggccgttcttcctggtcc
ctggacagaccttttgtcaccctgcttcctgcaaccatgctaatgtccctagctgattca
aagcaggggaaaaatcgctcaggcgtccgcatgtttaaagatgatgatttcctggcgcca
gcctcaggtgagtcatgggatcgacttcgcctgacctgctcccaacccttcacacgtcag
cagtcttttggcctggccttcctccgggtgtgttcctccctggactccttagatgaccct
gtgaggggttccttggcccccgagaactctagactgagccagggctctgatgctcaggag
tctggtcctagcccgtggctggctaatccttccattcggaggacgttcttcccagatccc
cagacgagcaccaaggaaatttcagagcttaagaatatcctaaagcagctgcagccaggg
gctttgggccgttcagcccgcatggtgctttcagctgcccggagggtgccccccgcgagc
atggcaggcgcgaaaaccagccccaaggaagcaggtcctagtcagccagccagcacagag
ctcagatcagtggagcagaactcagagaatgatgtgagcaggacaaagagacggaaagta
caagcccgcaggcctttatccagctcgaacttgcggtccaatcagagggggatggcaaag
gcagggcagagacaacaccaccgaccccaggcccaaagtaatggggtccaggagagtgca
ccgtgccccatttgtgcagtctccttcagcattgaggttcttgcctggcacgctgcgacc
tgtggagagatctccccacctcagccagcctctcgctccccaccaccatcttcatcgcgg
tctgtactgtgtgtgtcctccccggagagctcaccacccgcttcccgggtccagtgccct
ctatgccagctgtacttctcggcaggagaagtagaagaacatgccagcgtgtgtggggag
gtccctcagatgtacgatcagaagggtgggggaggccccaaagcaaaggaggttagagac
ggggggagggggggtgtcccaccctctccatccttcatccagccacagcccacctggacg
gagatcgtgaacaagaagctgaggttcccacctctgctcctggccgccatccaggagggg
cgcctgggcctggtgcagcagttgctggagtcgggggttgaggcgtcaggcagcgggccc
agcaggctcctgaggaatgtggaggaggctgaggaccgctcctggagggaagccctcaat
ctggccatccagctgggccacgaggccatcactgatgtgctgttggccaatgtcaagttt
gacttccggcagatccacgaggccctgctggtggcagtggacacaaaccagccagctgcg
gtgcagcgcctgctggcccggctggaacgggagaagggccgcaaagtggacactaggtct
ttctcactggctttcttcgactcgtccatcgatggctcgcgctttgcccctggtgtcact
ccactcaccctggcctgccagaaggacttgtatgagatcgcccagctgctcatggaccag
ggccacaccattgcccggccccacccggtctcctgtgcctgcctcgagtgcagcaatgcc
cgccgctacgacctgctgaagttctccctgtcccgcatcaacacctaccgcggcatggcc
agcagggcccacctctcgctggccagtgaggatgccatgctggctgccttccagctcagc
cgggagctcaggcgtcttgcacgcaaggaacctgagtttaagcccgagtacatcgccctg
gagtcgctgagccaggactacggctttgaactgctgggcatgtgccggaaccaaagcgag
gtcactgcggtgctcaatgaccagggcgaggacaacgagactgaacctgaggctgagggc
ctgggccaggcctttgaggagggcatccccaacttggcgaggctgcgactggccgtcaac
tacaaccagaagcggtttgtagcgcaccccatctgccagcaagtcctgtcctccatctgg
tgtgggaacctggccggctggcgtggaagcaccaccatctggaagctctttgtcgccttc
ctcatcttcctcaccatgcccttcctctgccttggctactggctggcacccaagtcccgg
ctgggccgcctgctgaagatcccagtgctaaagttcctgctgcactccgcctcctatctg
tggttcctcctcttcctgctgggcgagtccctggccatggagacacagctgagtaccttc
cgcggccgcagccagagcatctgggagacttccctacacatggtttgggtcacaggcttc
ctgtggtttgagtgcaaggaggtgtggatcgagggcctgcgcagttacttcctggactgg
tggaacttcctggacatggtcatcctgtccctgtacctggcggccttcgcgctgcgcctc
cttctggccgggcttgcccacgtgcactgccaggatgcccccagtggggctgcctgccac
tatttcaccacggctgagcgaagtgagtggcacaccgaggacccccagttcttggcggaa
gtgctgtttgctgtcaccagcatgctcagcttcacccgcctggcctacattctgccggcc
catgagtcactgggcactctgcagatctccattggcaagatgattgacgacatgatccgg
ttcatgttcattctcatgatcgtcctgactgccttcctctgtggcctcaacaacatctac
gtaccctaccaggagaccgagcggctgggcagtttcaacgagacattccggtttctgttc
tggaccatgtttggcatggaggagcacagcgtcgtagacatgcctcagtttctggtgcct
gaattcgtgggccgggccctctacggcatctttaccatcgtcatggtcattgtgctgctc
aacatgctcattgccatgattaccaactccttccagaagattgaggacgacgcggatgtg
gagtggaagttcgctcgctccaagctctacctgtcctacttccgggagggcctgacgctg
cctgtgcccttcaacgtcctgccctccccgaagggcctcttctaccttctcaggaaaatt
ttccgcttcatctgctgttgctgctcctgctgccgaaccgagaagccagactatccgcca
atccccatctatgccaatcccagggcaggagcagggcctggggagggacagcatgtatcc
taccgcctccgagtcatcaaggccctggtacagcgctacatagagacagcccagcgggag
tttgaggagacccgtcggaaagacctgggcaacagactgacggagctgaccaagactgtg
tctcgcctgcaaagtgaagtggctggtgtgcggcggattctggcagagggagggacaccc
caaccacccgaaggtgccagcatcctcagtcgctacatcacccgagtgcgtaacagtttc
cagactgtgggcccccccatccctgaaacccccgagctgacagtgtcagggattgtgggg
acccaggtaccttcagaaactgggcttcaggatgctggaggggctaggactccagcttct
ggggagcctggcccttcctccccagctcacgcgttagtacacagggagcaagaatcagag
gcagctggggacctgccccaggaggaagatttggggatcaagaggggatcctga
DBGET
integrated database retrieval system
