Ailuropoda melanoleuca (giant panda): 100474929
Help
Entry
100474929 CDS
T01329
Symbol
CSTF2T
Name
(RefSeq) cleavage stimulation factor subunit 2 tau variant
KO
K14407
cleavage stimulation factor subunit 2
Organism
aml
Ailuropoda melanoleuca (giant panda)
Pathway
aml03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
aml00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
100474929 (CSTF2T)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aml03019
]
100474929 (CSTF2T)
Messenger RNA biogenesis [BR:
aml03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
100474929 (CSTF2T)
U7-dependent histone pre-mRNA processing factors
100474929 (CSTF2T)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CSTF2_hinge
RRM_1
CSTF_C
RRM_7
RRM_10
DUF8400
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
100474929
NCBI-ProteinID:
XP_034518263
Ensembl:
ENSAMEG00000028492
UniProt:
A0A7N5JJD1
LinkDB
All DBs
Position
6:50195032..50199039
Genome browser
AA seq
644 aa
AA seq
DB search
MSSLAVRDPAMDRSLRSVFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYG
FCEYQDQETALSAMRNLNGREFSGRALRVDNAASEKNKEELKSLGPAAPIIDSPYGDPID
PEDAPESITRAVASLPPEQMFELMKQMKLCVQNSHQEARNMLLQNPQLAYALLQAQVVMR
IMDPEIALKILHRKIHVTPLIPGKSQPVSGPGPGPGLCPGPGPGPGPSPSVLLNQQNPSA
PQPQHMARRPVKDIPPLMQTPIQGGIPAPGPISAAVPGPGPGALTPGGGMQPQVGMPGVG
PVPLERGQVQMSDPRAPIPRGPMTAGGLPPRGLLGDAPNDPRGGTLLSVTGEVEPRGYLG
PPHQGPPMHHASGHDGRGPSSHEMRGGPLADPRLLIGEPRGPMIDQRGLPMDGRSSRDSR
GMETRAMETEVLETRVMERRGMETCAMETRGMEARGIDARGMEIRGPGPSSRGPMTGGIQ
GPGPINMGAGGPQVPRQVSGISGVGNPGAGMQGAGIQGAGMQGAGMQGAGIQGTGMQGAG
IQGTGMQGAGIQGTGMQGAGIQAVGMQGAGIQGTGMQGAGKQGGGQASSFSPGQSQVTPQ
DQEKAALIMQVLQLTADQIAMLPPEQRQSILILKEQIQKSTGAS
NT seq
1935 nt
NT seq
+upstream
nt +downstream
nt
atgtcgagtttggcggtgagagacccggcgatggatcggtcgctgcgttccgtgttcgtg
gggaacattccgtacgaggccaccgaggagcagctgaaggacattttctcggaggtgggt
tcggtggtcagcttccggctggtgtacgaccgcgaaacgggtaagcccaagggctatggc
ttctgcgagtaccaggaccaggagaccgcgctcagtgccatgcggaacctcaacgggcgc
gagttcagcggcagggcgctgcgggtggacaacgccgccagcgagaagaacaaggaggag
ctcaagagcctcgggcctgcggcgcccatcatcgactccccgtacggggaccccatcgac
cccgaggacgcccccgagtccatcaccagggcggtcgccagcctgcccccggagcagatg
ttcgagctcatgaagcagatgaagctgtgtgtgcagaacagtcaccaggaagcgcggaac
atgctgctccagaaccctcagctggcctacgcgctgctgcaggcccaggtggtcatgagg
atcatggaccccgagatcgcgctcaagatcctgcaccgcaagatacatgtcacaccgctg
atcccgggcaaatcccagcctgtctccggccccggccccggccccggcctctgccctggc
cccggccccggccccggccccagtcccagtgttctgctcaaccagcagaacccttctgcc
ccgcagcctcagcatatggccagaagacccgtcaaagacatccctcctctgatgcagacc
cctatccagggggggattccggccccgggccccatttcagccgccgttcccggacctggg
cctggtgccttaactcctggtggaggaatgcagccccaggttggaatgccaggcgtgggt
ccagtcccgttagagcggggacaggtgcagatgtcggatcctagagctcctatacctcgt
gggcctatgactgccgggggcctccctcctcgaggactgttgggagacgctccaaacgac
ccacgtggagggactctgctttcagtcactggagaagtagagcccagaggctatcttggc
ccacctcatcagggcccccccatgcaccatgcctctggtcatgatggccgtggcccttcc
tcacatgagatgaggggagggccattagcagatcccagactgctgattggagagcccagg
ggacccatgatagatcagaggggactccctatggatggtagaagtagtagagattctcga
gggatggagactcgagccatggagactgaagtcttagagacacgagtaatggagagaaga
ggaatggagacctgtgcgatggaaaccagagggatggaagcgagaggcatagacgcaaga
gggatggagatacggggccctggccccagttccagaggccctatgactggtggaatccag
ggacctgggcccattaatatgggggcaggtggtcctcaggttcctagacaggtctcaggc
atttcaggggtgggaaatcctggagctggcatgcagggggcaggcatacaaggagcgggc
atgcagggagcaggcatgcaaggggcgggcatacaagggacaggcatgcagggagcgggc
atacaagggacaggcatgcagggggcgggcatacaaggaacaggcatgcagggggcgggc
atacaagcagtgggcatgcagggggcgggcatacagggaacaggcatgcagggagcaggc
aagcaaggtggaggccaggctagcagtttcagtcctgggcagagccaggtaaccccacag
gatcaagaaaaggcagctctgatcatgcaggttcttcagctgactgcagatcagattgcc
atgctgcctcctgagcaaaggcagagcatcctaattttaaaggaacaaattcagaaatct
actggggcttcttga
DBGET
integrated database retrieval system
