Ailuropoda melanoleuca (giant panda): 100474965
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Entry
100474965 CDS
T01329
Symbol
FIP1L1
Name
(RefSeq) pre-mRNA 3'-end-processing factor FIP1 isoform X4
KO
K14405
pre-mRNA 3'-end-processing factor FIP1
Organism
aml
Ailuropoda melanoleuca (giant panda)
Pathway
aml03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
aml00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
100474965 (FIP1L1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aml03019
]
100474965 (FIP1L1)
Messenger RNA biogenesis [BR:
aml03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
100474965 (FIP1L1)
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Gene cluster
GFIT
Motif
Pfam:
Fip1
Motif
Other DBs
NCBI-GeneID:
100474965
NCBI-ProteinID:
XP_002919448
Ensembl:
ENSAMEG00000008072
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All DBs
Position
11:complement(69496801..69572378)
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AA seq
588 aa
AA seq
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MSAGEVERLVSELSGGTGGDEEEEWLYGDENEVERPEEENASANPPSGIEDETAENGVPK
PKVTETEDDSDSDSDDDEDDVHVTIGDIKTGAPQYGSYGTAPVNLNIKTGGRVYGTTGTK
VKGVDLDAPGSINGVPLLEVDLDSFEDKPWRKPGADLSDYFNYGFNEDTWKAYCEKQKRI
RMGLEVIPVTSTTNKITAEDCTMEVTPGAEIQDGRFNLFKVQQGRTGNSEKEAALPSTKA
EFTSPPSLFKTGLPPSRNSTSSQSQTSTASRKANSSVGKWQDRYGRAESPDLRRLPGAID
VIGQTITISRVEGRRRANENSNIQVLSERSATEVDNNFSKPPPFFPPGAPPTHLPPPPFL
PPPPTVSTAPPLIPPPGIPITVPPPGFPPPPGAPPPSLIPTIESGHSSGYDSRSARAFPY
GNVAFPHLPGSAPSWPSLVDTSKQWDYYSRREKDRDRDRDRDRERDRDRDRERERTRERE
RERDHSPTPSVFNSDEERYRYREYAERGYERHRASREKEERHRERRHREKEETRHKSSRS
NSRRRHESEEGDSHRRHKHKKSKRSKEGKEAGSEPAPEQESTEAAPAE
NT seq
1767 nt
NT seq
+upstream
nt +downstream
nt
atgtcggccggcgaggtcgagcgcctagtgtcggagctgagcggcgggaccggaggggat
gaggaggaagagtggctctatggcgatgaaaatgaagttgaaaggccagaagaagaaaat
gccagtgctaatcctccgtctggaattgaagatgaaactgctgaaaacggcgtacctaaa
ccgaaagtgaccgagactgaagatgatagtgatagtgacagtgatgatgatgaggatgat
gttcatgtcactataggagacattaaaacgggagcaccacagtatgggagttatggtaca
gcacctgtaaatcttaacatcaaaacagggggaagagtttatggaactacaggaacaaaa
gtcaaaggggtggaccttgacgcacctggaagcattaatggagttcctctcttggaggta
gatttggattcttttgaagataaaccatggcgtaaacctggtgctgatctttctgattat
tttaattatgggtttaatgaagatacctggaaagcttactgtgaaaaacaaaagaggata
cgaatgggacttgaagttataccagttacctctactacaaataaaattacggccgaagac
tgtactatggaagttacaccaggtgcagagatccaagatggcagattcaatctttttaag
gtacagcagggaagaactggaaattcagagaaggaagcagcacttccatctacaaaagcc
gagtttacttctcctccttctttgttcaagactggactcccaccaagcagaaacagcacc
tcttctcagtctcagacaagtactgcctccagaaaagccaattccagcgttgggaagtgg
caggaccggtatgggagggccgaatcacccgacctaaggagattacctggggcaattgat
gttattggtcagactataacaattagccgagttgaaggaaggcgacgggcaaatgaaaac
agcaacatacaggtcctttctgaaagatctgctactgaagtagacaacaattttagcaaa
ccacctccatttttccccccaggagctcctcccactcaccttccaccacctccatttctt
ccacctcctccaactgtgagcactgctccacctctgattccaccaccaggtattccaata
actgtaccacctccaggttttcctcctccaccaggcgctccacctccatctcttatacca
acaatagaaagtggacattcctctggttatgatagtcgttctgcacgtgcttttccatat
ggcaatgttgcctttccccaccttcctggttctgctccttcgtggcctagtcttgtggat
accagcaagcagtgggactattattcaagaagagagaaagatcgagatagagacagagac
agagaccgggaacgagaccgtgatcgggacagagaaagagaacgcaccagagagagagag
cgggagcgtgatcacagtcctacaccaagtgtttttaacagtgacgaagaacgttacagg
tacagagagtatgcagaaagaggctacgagcgccacagagcaagtcgagagaaagaagaa
cgacacagagaaagacgacacagagagaaagaggaaaccagacacaagtcatctcgaagt
aatagtagacgtcgccatgaaagtgaagaaggagacagtcacaggagacacaagcacaaa
aaatctaagagaagcaaagaaggaaaagaagctggcagtgagcctgcccctgaacaggag
agcaccgaagctgcacctgccgaatag
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