Ailuropoda melanoleuca (giant panda): 100474973
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Entry
100474973 CDS
T01329
Symbol
CAPRIN1
Name
(RefSeq) caprin-1 isoform X1
KO
K18743
caprin-1
Organism
aml
Ailuropoda melanoleuca (giant panda)
Brite
KEGG Orthology (KO) [BR:
aml00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aml03019
]
100474973 (CAPRIN1)
Messenger RNA biogenesis [BR:
aml03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Other mRNA localization factors
100474973 (CAPRIN1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Caprin-1_C
Caprin-1_dimer
Motif
Other DBs
NCBI-GeneID:
100474973
NCBI-ProteinID:
XP_011225046
Ensembl:
ENSAMEG00000008137
UniProt:
G1LNJ0
LinkDB
All DBs
Position
16:64477324..64514468
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AA seq
709 aa
AA seq
DB search
MPSATSHSGSGSKSSGPPPPSGSSGSEAVAGAGAAAPASQHPATGTGAVQTEAMKQILGV
IDKKLRNLEKKKGKLDDYQERMNKGERLNQDQLDAVSKYQEVTNNLEFAKELQRSFMALS
QDIQKTIKKTARREQLMREEAEQKRLKTVLELQYVLDKLGDDEVRTDLKQGLNGVPILSE
EELSLLDEFYKLADPERDMSLRLSEQYEHASIHLWDLLEGKEKSVCGTTYKALKEIVERV
FQSNYFDSTHNHQNGLCEEEEAASAPTVEDQVAEAEPEPAEEYTEQSEVESTEYVNRQFM
AETQFSSGEKEQVDEWTVETVEVVNSLQQQPQAASPSVPEPHSLTPVAQADPLVRRQRVQ
DLMAQMQGPYNFIQDSMLDFENQTLDPAIVSAQPMNPTQNMDMPQLVCPPVHSESRLAQP
NQVPVQPEATQVPLVSSTSEGYTASQPLYQPSHAAEQRPQKEPIDQIQATISLNTDQTTA
SSSLPAASQPQVFQAGTSKPLHSSGINVNAAPFQSMQTVFNMNAPVPPVNEPETLKQQNQ
YQASYNQSFSSQPHQVEQTDLQQEQLQTVVGTYHGSQDQPHQVTGNHQQPPQQNTGFPRS
SQPYYNSRGVSRGGSRGARGLMNGYRGPANGFRGGYDGYRPSFSNTPNSGYTQSQFSAPR
DYSGYQRDGYQQNFKRGSGQSGPRGAPRGRGGPPRPNRGMPQMNTQQVN
NT seq
2130 nt
NT seq
+upstream
nt +downstream
nt
atgccctcggccaccagccacagcggaagcggcagcaagtcgtccggaccgccacccccg
tcgggttcctccgggagtgaggcagtggcgggagccggggcagctgcgccggcttcccag
caccccgcaaccggcaccggcgctgtccagaccgaggccatgaagcagatcctcggggtg
atcgacaagaaacttcggaacctggagaagaaaaagggcaagcttgatgactaccaggaa
cgaatgaacaaaggggaaaggcttaatcaagatcagctggatgccgtatctaagtaccag
gaagtcacaaataacttggagtttgcaaaagaattacagaggagtttcatggcattaagt
caggatattcagaaaacgataaagaagacagcgcgtcgggagcagcttatgagagaagaa
gcagaacaaaaacgtttaaaaactgtacttgagctccagtatgttttggacaaattggga
gatgatgaggtgagaacggacctgaagcaaggtttgaatggagtgccaatattgtctgaa
gaggaattgtcattgttggatgaattctacaaattagcagaccctgaacgggacatgagc
ttgaggttgagtgagcagtatgaacatgcttccattcacctatgggacttgctggaagga
aaggaaaaatctgtatgtggaacaacctataaagctctaaaggaaattgttgagcgtgtt
ttccagtcaaactactttgacagcactcacaaccaccagaatgggctctgtgaggaggaa
gaggcagcctcagcacctacagttgaagaccaggtagctgaagctgaacctgagccagca
gaagaatacactgaacaaagtgaagttgaatcaacagagtatgtaaatagacaatttatg
gcagaaacacagttcagcagtggtgaaaaggagcaggtagatgagtggacagtcgaaaca
gttgaggtggtaaattcactccagcagcaacctcaggctgcatctccttcagtaccagag
ccccactctttgactccagtggctcaagcagatccccttgtgagaagacagcgagtccag
gaccttatggctcaaatgcaggggccctataatttcatacaggattcaatgctggatttt
gaaaaccagacacttgatcctgccattgtatctgcacagcctatgaatccaacacaaaac
atggacatgccccagctggtttgccctccggttcattctgaatctagacttgctcaacct
aatcaagttcctgtacaaccagaagctacacaggttcctttggtttcatccacaagtgag
gggtatacagcatctcaacccttgtaccagccttctcatgctgccgagcaacgaccacaa
aaggaaccaattgaccagattcaggcaacaatctctttaaatacagaccagactacagca
tcatcatcccttccggctgcttctcagcctcaggtgttccaggctgggacaagcaaacca
ctacatagcagtggaatcaatgtaaatgcagctccattccaatccatgcaaacggtgttc
aatatgaatgccccagttcctcctgttaatgaaccagaaactttgaaacagcaaaatcag
taccaggccagttataaccagagcttttctagtcagcctcaccaagtagaacaaacagac
cttcagcaagaacagcttcaaacagtggttggcacctaccatggttcccaggaccagccc
catcaagtgactggtaaccaccagcagcctccccagcagaacactggatttccacgtagc
agtcagccctattacaacagtcgtggtgtgtctcgtggtggttcccgtggtgctagaggc
ttgatgaatggatacaggggccctgctaatggattcagaggaggatatgatggttaccgc
ccttcattctctaacactccaaacagtggttatacacagtctcagttcagtgctccccgg
gactactctggctatcagcgggatggatatcagcagaatttcaagcgaggctctgggcag
agtggaccacggggagccccacgaggtcgtggagggcccccaagacccaacagagggatg
ccgcaaatgaacactcagcaagtgaattaa
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integrated database retrieval system
