Ailuropoda melanoleuca (giant panda): 100475012
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Entry
100475012 CDS
T01329
Symbol
HCN3
Name
(RefSeq) potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 3 isoform X2
KO
K04956
hyperpolarization activated cyclic nucleotide-gated potassium channel 3
Organism
aml
Ailuropoda melanoleuca (giant panda)
Pathway
aml04929
GnRH secretion
Brite
KEGG Orthology (KO) [BR:
aml00001
]
09150 Organismal Systems
09152 Endocrine system
04929 GnRH secretion
100475012 (HCN3)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
aml04040
]
100475012 (HCN3)
Ion channels [BR:
aml04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (HCN)
100475012 (HCN3)
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Gene cluster
GFIT
Motif
Pfam:
Ion_trans
Ion_trans_N
cNMP_binding
Ion_trans_2
GAS
Motif
Other DBs
NCBI-GeneID:
100475012
NCBI-ProteinID:
XP_002928330
Ensembl:
ENSAMEG00000000063
UniProt:
D2HZK8
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All DBs
Position
8:complement(128130823..128142795)
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AA seq
782 aa
AA seq
DB search
MEAEQRPTTGADERATPGLEAAPPAAPPPATAASGPLPGPASGPEPKRRQLGTLLQPTVN
KFSLRVFGSHKAVEIEQERVKSAGAWIIHPYSDFRFYWDLIMLLLMVGNLIVLPVGITFF
KEENSPPWIVFNVLSDTFFLLDLVLNFRTGIVVEEGAEILLAPRAIRSRYLRTWFLVDLI
SSIPVDYIFLVVELEPRLDAEVYKTARALRIVRFTKILSLLRLLRLSRLIRYIHQWEEIF
HMTYDLASAVVRICNLIGMMLLLCHWDGCLQFLVPMLQDFPPDCWVSINHMVNHSWGRQY
SHALFKAMSHMLCIGYGQQAPVGMPDVWLTMLSMIVGATCYAMFIGHATALIQSLDSSRR
QYQEKYKQVEQYMSFHKLPADTRQRIHDYYEHRYQGKMFDEDSILGELSEPLREEIINFT
CRGLVAHMPLFAHADPSFVTAVLTKLRFEVFQPGDLVVREGSVGRKMYFIQHGLLSVLAR
GARDTRLTDGSYFGEICLLTRGRRTASVRADTYCRLYSLSVDHFNAVLEEFPMMRRAFET
VAMDRLQRIGKKNSVLQRKRSEPSPGSSGGTMEQHLVQHDRDMARGVRGPAPGTGARLSG
KPVLWEPLVRAPLQAAAVTSSVAMALTHQRGPLPLSPDSPATLLARSARRSAGPPASPLE
PVRAGPLLARGPWASTSRLPVPPVRTLHASLSRAGRSQVSLLGPPPGGGGRRLGLRGRPL
SASQPSLPQRAAGDGSPGRKGSGSERLSSSGLLAKLPGTAQPPRPSVPEPAAPRGPQLSA
NM
NT seq
2349 nt
NT seq
+upstream
nt +downstream
nt
atggaggcagagcagcggccgacgacaggggccgacgaacgggcgacccctgggctggag
gcagcgcctcctgctgccccgccgcctgcgaccgcggcctcgggaccgctccccgggccc
gcttcggggcccgagcccaagcggaggcagctcgggacgctgctccagcccacggtcaac
aagttctcccttcgcgtgttcggcagccacaaagcagtggaaatcgagcaggagagggtc
aagtcagcgggggcctggatcatccacccctacagcgacttccggttttactgggacctg
atcatgctcctgttgatggtggggaacctcattgtgctgcccgtgggcatcaccttcttc
aaggaggagaactccccgccgtggatcgtcttcaacgtcctctcggacactttcttcctg
ctggatctggtgctcaacttccgcaccggcatcgtggtggaggagggcgccgaaatcctg
ctggcaccgcgtgccatccggtcacgctacctgcgcacctggttcctggtcgacctcatc
tcctccatcccggtggattacatcttcctggtggtggagctggagccgcggctggacgct
gaggtctacaaaacagcccgggcgctgcgcatcgtgcgcttcaccaagatcctcagcctg
ctgcggctgctccgcctctcccgcctcatccgctacatacaccagtgggaggagatcttt
cacatgacctacgacctggccagcgccgtggtccgtatctgcaacctcatcgggatgatg
ctgctgctgtgccactgggacggctgcctgcagttcctggtgcccatgctgcaggacttc
cctcctgactgctgggtctccatcaaccacatggtgaaccactcgtgggggcgccagtat
tcccatgccctgttcaaggccatgagccacatgctgtgcatcggctacgggcagcaggcc
cctgtcggcatgcccgacgtctggctcaccatgctcagcatgatcgtgggcgccacctgc
tacgccatgttcatcggccacgccacggcgctcatccagtccctggactcctcccgacgt
cagtaccaggagaagtacaagcaggtggagcagtacatgtccttccacaagctgccggct
gacacccggcagcgcatccacgactactacgagcaccgctaccaggggaagatgttcgat
gaggacagcatcctgggcgagctgagcgagccacttcgggaggagatcattaacttcacc
tgccggggcctggtggcccacatgccgctgtttgcccacgccgaccccagcttcgtcaca
gccgtgctgaccaagctacgctttgaggtcttccagccgggggacctggtggtgcgcgag
ggctccgtgggcaggaagatgtacttcatccagcacgggctgctcagtgtgctggcacgt
ggcgcccgggacacccgcctcactgacggatcctactttggggagatttgtctgctgacg
cggggccggcgcacagccagcgtgcgggctgacacctactgccgcctctactcgctcagt
gtggaccatttcaatgccgtgctggaggagttccccatgatgcgccgggcctttgagacc
gtggccatggatcggctgcaacgcatcggcaagaagaattctgtactgcagcggaaacgc
tccgagccaagtccgggcagcagtgggggcaccatggagcagcacttggtgcagcatgac
agggacatggcccggggtgttcggggcccagccccaggcacaggcgctcggctcagcgga
aagccggtgctgtgggagccactggtgcgagcgcctctgcaggcggctgctgtgacgtcc
agtgtggccatggccctgactcaccagcggggcccgctgcccctctcccctgactctcca
gccaccctcctggctcgctctgcgcgacgctcagcaggccccccagcctccccgctagag
cctgtccgagctggccctctgctggcccgcggtccatgggcatctacctcccgcctgccc
gtcccgcctgtccgaaccctccatgccagcctgtcccgggctgggcgctcccaggtgtcc
ttgctgggtccccccccaggaggaggtggacggcgactaggacttcggggccgcccactc
tcagcctcccaaccctctctgcctcaacgggccgccggagatggctctcccgggcgtaag
ggctcaggaagtgaacgcctgtcctcctcagggctcttggccaagcttccagggacagcc
cagccccccaggccctcagtgcccgagccagctgcccctcggggcccccagctctctgcc
aacatgtga
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