Ailuropoda melanoleuca (giant panda): 100475071
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Entry
100475071 CDS
T01329
Symbol
NPAS1
Name
(RefSeq) neuronal PAS domain-containing protein 1 isoform X1
KO
K09098
neuronal PAS domain-containing protein 1/3
Organism
aml
Ailuropoda melanoleuca (giant panda)
Brite
KEGG Orthology (KO) [BR:
aml00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
aml03000
]
100475071 (NPAS1)
Transcription factors [BR:
aml03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
100475071 (NPAS1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAS_3
PAS_11
PAS
PAS_4
HLH
Motif
Other DBs
NCBI-GeneID:
100475071
NCBI-ProteinID:
XP_034494417
Ensembl:
ENSAMEG00000008374
LinkDB
All DBs
Position
12:complement(32314279..32330947)
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AA seq
613 aa
AA seq
DB search
MAAPYPSSGGGGEVKCGGGRGRSVSWDFLPGLVVKAPPGPCLQAQRKEKSRNAARSRRGK
ENLEFFELAKLLPLPGAISSQLDKASIVRLSVTYLRLRRFAALGAPPWGLRAAGPPAGLA
PGHRGPVALVSEVFEQHLGGHILQSLDGFVFALNQEGKFLYISETVSIYLGLSQVELTGS
SVFDYIHPGDHSEVLEQLGLRAPTPGPPTPPSVPSSSSSSSSSSLADTPEIEASAAEVPP
FSRVQERSFFIRMKSTLTKRGLHVKASGYKVIHVTGRLRARSLGLVALGHTLPPAPLAEL
PLHGHMIVFRLSLGLTILACESRVSDHMDLGPSELVGRSCYQFVHGQDAARIRQSHLDLL
DKGQVMTGYYRWLQRAGGFVWLQSVATVAVSGKSPGERHVLWVSYVLSQAEGGQTPLDAF
QLPASVACEDASSPEPEPTDGKTEGCGRTNQHPSYLPLPEPEPAVERKQAAPIDKDEAPR
SRGKRIKVEPGPGEAKDPEDSGDEEPSSHPALPRPEFTSVIRAGALKQDLVRPWGLGPPG
DPPPSLLHAGFLPPVVRGLCTPGTIRYGPAELGLMYPHLQRLGPGPALPEAFYPTLGLSY
PGPTGTRVQRKGD
NT seq
1842 nt
NT seq
+upstream
nt +downstream
nt
atggcggccccctaccccagcagtggcggcggaggcgaggtcaagtgcgggggaggtcgt
ggccgcagcgtctcgtgggactttctgcccgggctggtggtcaaggccccgcccggaccc
tgcctgcaggcgcagcgcaaggagaagtcccggaacgcggcgcgctcgcggcgcggaaag
gagaacctggagttcttcgagctggccaagctgctcccgctgcccggagccatctcgagc
cagctggacaaggcgtccatcgtgcgtctcagcgtcacctacctccgcctgcgccgcttc
gcagccctcggggcgccgccctggggactgcgggccgcggggccaccggccggcctcgcc
ccaggccacaggggccccgtggcgttggtctctgaagtcttcgagcagcacctgggagga
cacatcttgcagtcgctggatggcttcgtgtttgccttgaaccaggaagggaagttcctc
tacatctccgagaccgtctccatttatctgggtctctcacaagtggagctgacgggtagc
agcgtcttcgactacatccatcccggggaccactccgaggtgctggagcaactggggctc
cgcgccccgacccccgggccccccaccccgccctccgttccctcctcttcctcctcctcg
tcttcctcctcgcttgcggatacccctgagatagaggccagcgccgccgaggtgcctccc
ttctcccgcgtccaggagcgctccttcttcatccgcatgaaatctaccctcaccaagagg
gggctgcacgtcaaggcctcggggtacaaggtcatccacgtcactgggcgccttcgggcc
cgctccctgggccttgtggctttgggtcacacgttgcccccggccccactggctgagctg
ccgctccacggacatatgatcgtcttccgtctcagcctgggtctcaccatccttgcttgt
gagagcagagtcagcgaccacatggacctggggccctcagagctcgtgggtcgcagctgc
taccagtttgtccacggacaggatgcggccaggatccgccagagccacctggacctgctg
gacaaggggcaggtgatgaccggttactaccgttggctgcagcgggctgggggctttgtg
tggctgcagtctgtggccaccgtcgctgtgagcgggaagagccccggggagcgccacgtg
ctctgggtcagctatgtgctcagccaagccgagggtggccagacccctctggatgccttc
cagcttccagccagtgtggcctgtgaggacgcatccagccccgagccagagcccacagat
gggaagactgagggctgcggacgcacaaaccagcacccttcatatctccctcttccagag
ccagagcctgcagtggaaaggaagcaggctgcccccatagacaaggatgaggccccccgg
agccggggcaaacgcatcaaagtggagcctggcccaggggaggctaaagacccggaggac
agtggggacgaggagccgtctagccacccggccctgccacggcccgagtttacttctgtc
atccgggcaggggccctgaaacaggacctggtgcggccctggggcctggggcctcctggg
gaccccccaccttccctcctccacgcgggcttcctgccccccgtcgtgcggggcctctgc
acgcccggcaccatccgctacggccctgcggagctggggctcatgtacccgcacctgcag
aggctgggcccaggccccgccctccctgaggccttctaccccaccctgggcctgtcgtac
ccggggcccacgggcaccagggtgcagcggaagggggactga
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