Ailuropoda melanoleuca (giant panda): 100475098
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Entry
100475098 CDS
T01329
Symbol
NUP98
Name
(RefSeq) nuclear pore complex protein Nup98-Nup96 isoform X2
KO
K14297
nuclear pore complex protein Nup98-Nup96
Organism
aml
Ailuropoda melanoleuca (giant panda)
Pathway
aml03013
Nucleocytoplasmic transport
aml05014
Amyotrophic lateral sclerosis
aml05164
Influenza A
Brite
KEGG Orthology (KO) [BR:
aml00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
100475098 (NUP98)
09160 Human Diseases
09172 Infectious disease: viral
05164 Influenza A
100475098 (NUP98)
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
100475098 (NUP98)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aml03019
]
100475098 (NUP98)
03036 Chromosome and associated proteins [BR:
aml03036
]
100475098 (NUP98)
Messenger RNA biogenesis [BR:
aml03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
100475098 (NUP98)
Chromosome and associated proteins [BR:
aml03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
100475098 (NUP98)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup96
Nucleoporin2
Nup98_GLEBS
Nucleoporin_FG
Motif
Other DBs
NCBI-GeneID:
100475098
NCBI-ProteinID:
XP_002928033
Ensembl:
ENSAMEG00000010984
LinkDB
All DBs
Position
8:complement(56312440..56429760)
Genome browser
AA seq
1800 aa
AA seq
DB search
MFNKSFGTPFGGGTGGFGTTSTFGQNTGFGTTSGGAFGTSAFGSSNNTGGLFGNSQTKPG
GLFGTNSFSQPATSTSTGFGFGTSTGTSNSLFGTASTGTSLFSSQNNAFAQNKPTGFGNF
GTSTSSGGLFGTTNTTSNPFGSTSGSLFGPSSFTAAPTGTTIKFNPPTGTDTMVKAGVST
NISTKHQCITAMKEYESKSLEELRLEDYQANRKGPQNQVGAGTTAGLFGSSPATSSATGL
FSSSTTNSGFAYGQNKTAFGTSTTGFGTNPGGLFGQQNQQTTSLFSKPFGQATTTQNTGF
SFGNTSTLGQPSTNSMGLFGVTQASQPGGLFGTATNTSTGTAFGTGTGLFGQPNTGFGAV
GSTLFGNNKLTTFGTSTTSAPSFGTTSGGLFGFGTNTSGSSIFGSKPGPGTLGTGLGAGF
GTALGAGQASLFGNNQPKIGGPLGTGAFGAPGFNTTTATLGFGAPQAPVALTDPNASAAQ
QAVLQQHINSLTYSPFGDSPLFRNPMSDPKKKEERLKPTNPAAQKALTTPTHYKLTPRPA
TRVRPKALQTTGTAKSHLFDGLDDDEPSLANGAFMPKKSIKKLVLKNLNNSNLFSPVNRD
SEDLASPSDYPENGERFSFLSKPVDENHQQDGDDDSLVSRFYTNPIAKPIPQTPESAGNK
PNSSSSVDDTIVALNMRAALRNGLEGSSEETSFHEESLQDDREEIENNTYHMHPAGIILT
KVGYYTIPSMDDLAKITNEKGECIVSDFTIGRKGYGSIYFEGDVNLTNLNLDDIVHIRRK
EVIVYLDDNQKPPVGEGLNRKAEVTLDGVWPTDKTSRCLIKSPDRLADINYEGRLEAVSR
KQGAQFKEYRPETGSWVFKVSHFSKYGLQDSDEEEEERPSKTSTKKLKTAPLPPAGQATP
FQMALNGKPAPPPQSQSPEVEQLGRVVELDSDMVDITQEPVLDSMLEESVPEDQEPVSAS
THIASSLGINPHVLQIMKASLLADEEDVDMVLDQRFSHLPSKADTSQEICSPRLPISASH
SSKSRSLVGGLLQSKFTSGTFLSPSASVQECRTPRAASLMNIPSTSPWSVPPPLTSVFTV
PSPAPEVQLKTVGTRRQPGLVPLEKSVTYGKGKLLMDMALFMGRSFRVGWGPNWTLANSG
EQLSGSHELENHQIADSMEYGFLPNPVAVKSLTESPFKVHLEKLSLRQKKPDEDLQLYQI
PLELKLKHSTVHVDELCPLIVPNPGVAVIHDYANWVKKASGDFLEAQIVKHWSLTWTLCE
ALWGHLKEPDSQLDEPSEYIQILERRRTFSRWLSHTAAPQIEEEVSLTRKDRPVEAVFSY
LTGKRISEACSLAQQSGDHRLALLLSQLVGSQSVRELLTMQLVDWQQLQANCFIQDERLR
IFALLAGKPVWQLTEHRQINVCSFLDWKRALAIHLWYLLPPTASISRALSMYEEAFQNSY
EADSYACSPLPAYLEGSGCVIKEEKNSQRPLQDVCFHLLKLYSDRHYDLNQLLEPRSVTA
DPLDYRLSWHLWEVLRALNYTHLSEQCEGVLQTSYAGQLESEGLWEWAIFVLLHIDNSSM
REKAVRELLTRHCQLLETPESWAKETFLTQKLCVPAEWINEAKAVRAHMESDKHLEALHL
FKAGHWNRCHKFIIKHLASDAIINENYDYLKGFLEDLAPPERSSLIQDWETSGLVYLDYI
RIIDMLHQIQQVDCSVYELEELHAKVVSLCNRIQQMQCYNAKDLLAQSDMAKRAANLLRV
VWSLQRAPETTSDSTPDPQRVPLGLLAPHIGQLPMPEDYALEELRGLTQSYLRELTVGSQ
NT seq
5403 nt
NT seq
+upstream
nt +downstream
nt
atgtttaataagtcatttggaacaccctttgggggtggcactggtggctttggcacaact
tcaacatttgggcagaacactggctttggcactactagtggaggagcatttggaacatct
gcatttggttctagcaacaatactggaggcctgtttggaaattcgcagaccaaaccagga
ggattatttggtactaattcatttagtcagccagctacttccacaagcactggctttggg
tttggcacatcaacaggaacatcaaatagcttgtttggaaccgcaagtacagggaccagt
ctcttttcatcccaaaacaatgcctttgcacaaaacaaaccaactggctttggaaatttt
ggaacaagtactagcagtgggggactttttggtactacaaatacaacctccaatcctttt
ggtagcacatctggctccctttttgggccaagtagttttacagctgctcctactgggacc
actattaagtttaatcctcccactggtacagatactatggttaaagctggtgttagcact
aacatcagtaccaagcaccagtgtattactgctatgaaagaatatgaaagcaagtctcta
gaggaacttcgtttagaagattatcaggctaaccggaaaggcccgcagaaccaagtggga
gcaggtaccacagctggcttgtttgggtcttctccagccacctccagtgcgacaggactc
ttcagctcctctaccactaattcaggctttgcatatggtcagaacaaaacagcctttgga
actagtaccactggatttggaacaaatccaggtggtctctttggacaacagaatcagcag
actaccagcctcttcagcaaaccattcggccaggccacaaccacccagaacactggcttt
tcctttggtaataccagcacgctaggacagccaagcaccaacagcatgggtttatttgga
gtaacccaagcctcacagcctggagggctttttgggacagctacaaacaccagcactggg
acagcatttggaacaggaacaggtctctttgggcagcccaacactggatttggtgctgtt
ggttcgaccctgtttggcaataacaagcttactacatttggaaccagcacaaccagtgct
ccttcatttggtacaaccagtggcgggctctttggttttggcacaaataccagtgggagt
agtatttttggaagtaaaccaggacctgggactctgggaactgggcttggtgcaggattt
ggaacagctcttggtgctggacaggcatctttgtttgggaacaaccaacctaagatcgga
gggcctcttggtacaggagcctttggggcccctggatttaatactacgacagccactttg
ggctttggagccccccaggccccagtagctttgacagatcccaatgcttctgctgcccag
caagctgttctccaacagcacatcaatagtttaacatactcaccttttggagactctcct
ctcttccggaatcccatgtcagaccctaagaagaaagaagagagattgaaaccaacaaat
ccagcagcccagaaggctctcactacacctactcattataaactaacaccccgccctgcc
accagagttcgaccaaaggctttacaaacaacaggcacagccaagtcacatctctttgat
gggctggatgatgatgagccatccttagccaatggagcattcatgcccaagaagagcatt
aagaagttggttttgaaaaaccttaacaacagcaatctcttctctcctgttaatcgtgac
tcagaagatctagcttcaccatctgattatccagaaaatggagagagattcagtttcctg
agcaaacctgttgatgagaaccatcagcaggatggagatgatgattctcttgtgtcacgt
ttttatactaacccaattgccaaacccattcctcaaaccccagagagtgctggaaataaa
cccaacagcagcagcagtgtggatgataccattgttgcgttaaatatgcgtgctgcattg
cgaaatgggctggaaggaagcagtgaagagacctcttttcatgaggagtcactgcaggat
gaccgagaagaaatagaaaataatacttaccatatgcatccggcaggcattattctcact
aaggttggttactatactattccatctatggatgaccttgctaaaattaccaatgaaaaa
ggagagtgcattgtctctgacttcactattggtcgtaaaggttatggttcaatctatttt
gaaggagatgtgaatttgacaaatttaaatttggatgatattgtgcatattcgaagaaaa
gaagtgattgtctacttagatgataaccaaaaaccacctgtgggtgaagggctaaatagg
aaggctgaagttacactggacggagtttggccaacagataaaacatctcgttgtttaata
aagagcccagatcgacttgctgatatcaactacgagggcagattggaagcagtttcaagg
aaacagggagctcaattcaaagagtaccgtcctgaaacgggttcttgggtatttaaggtc
tcccatttttctaagtatggccttcaggattctgatgaagaggaggaggaacggccatct
aaaaccagtacaaagaagttgaagactgcccctttgcctcctgcaggccaggccacccca
ttccagatggctcttaatggcaagccagcacctccaccccagagccagagtccagaggtg
gagcagttagggagggttgtggaactggacagtgacatggtagatatcacccaggagcca
gttttggattccatgttagaagagagcgtgcctgaggatcaggaacctgtgtctgcctca
acacacattgcatcttcactgggaattaatccacatgtcttacagatcatgaaagcatca
ttgcttgccgatgaagaagatgtagacatggtcctggatcaacgcttcagtcaccttcct
tctaaagcagatacttctcaagaaatctgttctcccagactccccatttcagcatcccac
tcatcaaaatcccgttctttagttggtgggttactacaatcaaagtttactagtggaact
tttctttcaccaagtgcctctgtacaagaatgtcgtactcccagagcagcatctttgatg
aatatcccatccacatccccttggtctgtccctccacccctgacctctgtgtttacagtg
cccagcccagcccctgaagttcagttgaaaaccgtgggtacacgcaggcaaccaggccta
gtccctcttgaaaagtctgtcacctatggcaaggggaagctcttgatggacatggcctta
tttatgggacgctcatttcgagttggttggggccccaactggactcttgctaatagtgga
gaacagctgagtggttctcatgaactggaaaatcatcagattgccgattctatggaatat
ggattcctgcctaatccagtagctgttaaatccctaactgagtctccattcaaagttcac
ttggaaaaactcagtttgcgacaaaagaagccagatgaagacttgcagttataccagata
cctctggagctcaaattaaaacatagcactgtccatgtggatgagctgtgtcctctcatt
gtccctaatccaggagttgctgtcattcatgactatgcaaattgggttaagaaagcatca
ggagactttttggaagcacaaattgtgaagcactggagcttaacctggacattatgtgaa
gccttatggggccatctgaaggagcctgacagccagctggatgagcctagtgaatacatt
cagattctggagcgaagaagaactttctctcgctggctatcccatactgccgcacctcag
attgaggaggaagtctccttaaccagaaaagacaggcctgtggaggctgtcttcagctac
ctcacaggcaagaggatcagtgaggcctgctctctggcgcagcagtcaggtgatcatcgt
cttgccctccttttatcccagctggtgggtagccagtcagtccgggagctgcttactatg
cagctggtggattggcaacagctccaggctaactgtttcatccaggatgagagactgcgc
atcttcgccttgttggctggaaaaccggtatggcagctcacagaacacaggcaaatcaat
gtgtgctcatttttggactggaaacgcgccctggctattcatctttggtatttgcttcca
ccaacagcctccatttccagggcactcagcatgtatgaagaagcatttcagaattcctat
gaggctgacagctatgcctgctccccacttcctgcatacctggagggctctggctgtgtg
ataaaggaggaaaaaaactcacagagaccacttcaagatgtctgttttcaccttctaaaa
ctttacagtgacagacattatgatctcaaccagctcctggagcctcgaagcgtaacagct
gatcctttggactatcgcctaagctggcacttgtgggaggtgctgcgggctcttaactat
acacatctctcagaacagtgtgagggtgtgctacagaccagttatgctggccaactggaa
agtgaggggctctgggagtgggccatctttgtcctcctgcacattgacaactcaagcatg
cgtgagaaggcggttcgagagctgcttacccggcactgccaactattagagacccctgag
tcttgggctaaggagactttcctgacccaaaagctttgtgtgcctgctgagtggattaac
gaggccaaagcagtgcgagcacacatggaatctgacaagcacttggaggccctccattta
tttaaagctggacactggaaccgctgccacaaattcatcatcaagcacttagcttctgat
gccatcattaacgagaactacgactacctgaaggggttcttggaagacctagcacctcca
gagcgcagcagtctaatccaggactgggaaacgtcagggcttgtttacttggactatatt
cggatcattgacatgcttcaccagatacagcaggtggattgctcagtttatgaactggag
gagttacatgccaaagtggtctcactgtgcaatcgcatacagcagatgcagtgttacaat
gccaaggatctcctggcccagtcagacatggccaaacgtgcagccaacctgctgcgggtg
gtatggagccttcagcgtgcccctgaaacaacctccgactcaacaccagaccctcagcga
gtccctttgggcctcttggctccccacattggccagctccccatgcctgaggactatgcc
ttggaggaactgcgcggcctcacacagtcctacctgcgagaattgactgttgggagccag
tga
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integrated database retrieval system
