Ailuropoda melanoleuca (giant panda): 100475234
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Entry
100475234 CDS
T01329
Symbol
ATG4D
Name
(RefSeq) cysteine protease ATG4D isoform X2
KO
K08342
cysteine protease ATG4 [EC:3.4.22.-]
Organism
aml
Ailuropoda melanoleuca (giant panda)
Pathway
aml04136
Autophagy - other
aml04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
aml00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
100475234 (ATG4D)
04136 Autophagy - other
100475234 (ATG4D)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
aml01002
]
100475234 (ATG4D)
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
aml04131
]
100475234 (ATG4D)
03029 Mitochondrial biogenesis [BR:
aml03029
]
100475234 (ATG4D)
Peptidases and inhibitors [BR:
aml01002
]
Cysteine peptidases
Family C54: Aut2 peptidase family
100475234 (ATG4D)
Membrane trafficking [BR:
aml04131
]
Autophagy
Autophagosome formation proteins
Atg8 conjugation proteins
100475234 (ATG4D)
Mitochondrial biogenesis [BR:
aml03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
100475234 (ATG4D)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_C54
Motif
Other DBs
NCBI-GeneID:
100475234
NCBI-ProteinID:
XP_011225976
Ensembl:
ENSAMEG00000011409
UniProt:
G1LY72
LinkDB
All DBs
Position
4:7593635..7600109
Genome browser
AA seq
473 aa
AA seq
DB search
MNSVSPAAAQYRSGSPEDARRPEGRRPRGPRVPDPNGLRPSGASGPALGSPAAAPGEPDE
VDKFKAKFLTAWNNVKYGWAVKSRTSFSKISSVHLCGRRYRFEGEGDIQRFQRDFVSRLW
LTYRRDFPPLAGGCLTSDCGWGCMLRSGQMMLAQGLLLHFLPRDWTWAEGSAPSPSEPSG
LASPNRYRGPARWMPPRWAQGTPELEQERRHRQIVSWFADHPQAPFGLHRLVELGQSSGK
KAGDWYGPSLVAHILRKAVESCSEVTHLVVYVSQDCTVYKADVARLVARPDPTAEWKSVV
ILVPVRLGGETLNPVYVPCVKELLRSELCLGIMGGKPRHSLYFIGYQDDFLLYLDPHYCQ
PTVDVSQADFPLESFHCTSPRKMAFAKMDPSCTVGFYAGDQKEFETLCSELTRVLSSSSA
TERYPMFTLAEGHAQDHSLDDLCSQLSQPTLRLPRTGRLLKAKRPSSEDFVFL
NT seq
1422 nt
NT seq
+upstream
nt +downstream
nt
atgaactccgtgtcgccggccgccgcgcagtaccggagcgggagcccagaggacgcgcgc
cgccccgagggccgcaggccgcggggcccccgagtcccggaccccaacggcctgaggccc
tctggagccagcggccccgctcttggctcgcccgcggccgcccctggggagccggacgaa
gtggacaagtttaaggcgaagttcctgacggcctggaacaacgtcaagtacggttgggca
gtcaaaagccggaccagctttagcaagatatccagcgtccacctctgtggccgccgctac
cgcttcgagggcgaaggtgacatccagcgtttccagcgtgacttcgtgtcccgcttgtgg
ctcacataccgccgggacttcccgcccctcgcaggaggctgtctgacctcggactgtggc
tggggatgtatgctgcgcagtgggcagatgatgctggcccagggcctgctgctgcatttc
ctgcccagagactggacatgggccgagggctcagccccgagcccctctgagccatcaggg
ttggcctctcccaaccgataccgtgggcctgcacgctggatgcccccgcgctgggcccag
ggcacccctgagctggagcaggaacgtcggcaccggcagatagtgtcctggttcgctgac
cacccccaggccccctttggcctacaccggctggtggagcttgggcagagctcaggcaag
aaggcgggggactggtatgggccttctctggtggcacacatactcaggaaagctgtggag
agctgctcagaggtcacccacctggtggtgtatgtgtctcaggactgcacagtgtacaag
gcagatgtggcacggctggtggccaggccggaccccacggctgagtggaagtccgtggtc
atcttggtgccagtgcggctgggcggcgagactctcaaccctgtgtacgtgccctgtgtg
aaggagctcctgcgttcagagctgtgcctgggcatcatggggggcaagccacggcattca
ctgtacttcatcggctaccaggatgacttcctgctgtacctggacccccactactgccag
cccactgtggatgtcagtcaggctgacttccccctggagtccttccattgcacctcaccc
cgaaagatggcctttgctaagatggacccaagctgtacggtggggttctatgctggagac
cagaaggagtttgagacactctgctcagagctgaccagggtcctcagctcctcctcggcc
actgagcgctaccccatgttcaccctggccgagggccatgctcaggaccacagtctggac
gacctctgctcccagctctcccagccaacactgcggctccctcgcacgggccggctcctc
aaagccaaacgcccaagctctgaggactttgtgtttttataa
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