Ailuropoda melanoleuca (giant panda): 100475343
Help
Entry
100475343 CDS
T01329
Symbol
TAF1C
Name
(RefSeq) TATA box-binding protein-associated factor RNA polymerase I subunit C isoform X1
KO
K15214
TATA box-binding protein-associated factor RNA polymerase I subunit C
Organism
aml
Ailuropoda melanoleuca (giant panda)
Brite
KEGG Orthology (KO) [BR:
aml00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
aml03021
]
100475343 (TAF1C)
Transcription machinery [BR:
aml03021
]
Eukaryotic type
RNA polymerase I system
Basal transcription factors
SL1/TIF-1B
100475343 (TAF1C)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF1C_HB
TAF1C_beta-prop
TAF1C_C
Docking
Motif
Other DBs
NCBI-GeneID:
100475343
NCBI-ProteinID:
XP_034528781
Ensembl:
ENSAMEG00000006277
LinkDB
All DBs
Position
12:complement(77295160..77304530)
Genome browser
AA seq
892 aa
AA seq
DB search
MDFPSSLQPTLFMTGPLGLSNVPDMSFMCSWRDALTLPESLPKNSENGAPHLSTGLLWEP
ETPGPLPLLPPSPDPWDPGVTAQDLLFRGGFTFRRKPQAVLDVTEQVSNPTVGSAVWQGL
CTVTRPPFPQLSRFLWDHGDIAFAPLGKLMLENFKLEGAQSRSKKKTVVSVKRLLQDLGG
HQPWGCPWAFLSFRQRRFSILGGPVLGKSVANLLGELLHEELAMRWEQLLLDDAFTGGAL
AWVPGRTAQVGQLVYPAGGALDKLPRDPGFQEVSLTPGGDPQALGDPGHIQLRGPVRQVV
TCTVQGESLLAVRSDYHCALWKVSKQGRPTPLQVLQVGKGATGISLSPHLPGELAVCSRS
GTVCLWTPQDGLQQVYKDPETLVFCDPSSWRWADFTAHPRVLTVGDRTGVKMIDAQGPPG
CGLLLFRGGAEASCQKGERVLLTQYLGECGPKSLHPTLHLICTQFSLYLVDERLPLVPML
KWNHDLPSAPLWAQLLPPPRPGCPQPLLLGGQGGHLQLLHLAGEGASAPRLAGPPQSLPS
SSDSLSAFPLLEPKSQWRLQERLKAPTIGLVATIPSSASEPVLSLFQLSAAGDVFHQRLR
LQAGPGPNSCASTASWTPQATACCSRWLKDLLKVPPAPPVWAAPTFSHRRLLGRMEQREV
EPKGPEALRAAMAEGRLLRQRDLGSLPSAEPPPAPEPGPEDELSTRLEAAWEGQMAAWWE
RQQGRSSGPGRQPKRRKRRTQLSSTFSSLSGRLDLSDATSPPHSPDRASPEARPQPPVTP
PSQESTQELWAQGVPSERQQTLRDYMARLPLQKDTPRGVSLPLSQTSSIRATPSRPQTLP
DGTAELPPRRNTLRGAAMSSSQTSSIRATPSRQQAPVLSGSQPHRKKPRMGF
NT seq
2679 nt
NT seq
+upstream
nt +downstream
nt
atggacttccccagctccctccaacccacgctgttcatgacgggcccccttggtctgagt
aatgtccctgacatgtccttcatgtgtagctggagagacgccctgaccctgccagagtcc
ctgcccaagaactctgagaatggggcgccacacttgtccacaggcctgctctgggagcca
gagacccccggacccctacctttgctgcctcctagtcctgatccctgggaccctggggtg
actgcccaggacctgcttttccggggaggtttcacattccgaaggaagccgcaggccgtg
ctggacgttaccgaacaggtaagtaaccccacggtgggcagtgctgtgtggcaggggctg
tgcacagtgacccggcctcctttcccgcagctcagccgcttcctgtgggaccatggggac
atagcttttgcacccctggggaagctgatgctggagaatttcaaactggagggagcacag
agccgttctaagaagaagacagtggtcagtgtgaagaggctactccaggacctcggtgga
caccagccctggggctgcccctgggctttcctcagcttccgacagcgccggttctccatc
ctcgggggccctgtcctgggcaagtccgtggccaacctcctgggggagctgctgcatgag
gagctggctatgcggtgggagcagctgctcctggatgatgcattcaccgggggcgctttg
gcctgggtgcccgggaggacggcccaggttggacagctggtctaccctgcgggaggtgct
ctagacaagctccccagagacccaggtttccaagaggtcagtctgaccccaggcggtgac
cctcaggctctcggggaccctggccacatccagctccgaggacctgtccggcaggtggtg
acctgcactgtgcaaggggaatctctgctggctgtccgctctgactaccactgtgccctg
tggaaggtcagtaagcaggggcgacccacccccctccaggtgctgcaggtcgggaagggg
gccacagggatcagcctcagccctcacctgcctggggagttggctgtctgcagccgttcc
ggaaccgtctgtctgtggaccccccaggatgggctgcagcaagtctacaaggaccctgag
acccttgtgttctgcgacccctcttcctggcgttgggcagacttcaccgctcacccccgg
gtgctgactgtgggggaccgcactggagtgaaaatgattgacgcccagggcccacctggc
tgtggtctgctgctttttcgtgggggcgcagaagcttcatgccaaaagggggaacgtgtc
ctgctgacccagtacctgggggagtgtggccccaagtctctgcatcccacactccatctc
atctgtacccagttctcgctctacctggtggatgagcgcctccccttggtgcccatgctg
aagtggaaccacgacctcccctctgctcccctgtgggcccagctgctgcccccgccccgc
cctggctgcccgcagccactgctcctggggggccagggcgggcacctgcagctgttgcac
ctcgcaggagagggggcctctgcaccccggctggcagggcctccccagtctctcccatcc
agcagtgactccctctccgctttccccctgctggagcccaagagtcagtggcggctgcag
gagcgtctgaaagcgccaaccataggtctggttgccaccatcccatcctcagcttccgag
ccagtcctgtcgctcttccagctctccgcggctggggatgtctttcaccagcgcctccgc
ctccaggcaggccccgggcctaactcctgtgcctccacagcttcctggactccccaggcc
actgcctgctgcagccggtggctgaaggacctgctgaaggtgcccccggctccccccgtg
tgggcagcacccaccttttcccaccgccgtctgctaggccgcatggaacagagggaggtg
gagccaaaagggccggaggctctccgagcagccatggccgaagggcggctgctgcggcag
agggacctgggttcgctcccctctgccgaaccgccccccgcccccgagccaggccctgag
gatgagctcagcacacgtttggaggcagcctgggaaggccagatggccgcctggtgggag
aggcagcagggcaggagctcggggcctgggagacagcccaagcggcgcaagcgccggact
cagctgtccagcactttctcctcgctcagtggccgcctggacctctcagacgccaccagc
ccccctcacagcccagatcgggcgtcccctgaggccaggcctcaaccaccggtgaccccg
ccctcccaggagtcaactcaggagctgtgggctcagggtgtcccctcggagcggcagcag
actctccgggactacatggccaggctaccgctccaaaaggacaccccccgaggtgtctcc
ttgcccctctcccagacctccagcatccgggccacgccctccaggccccagaccctccca
gatggcacagcggagctgccgccacgaaggaacaccctgagaggcgccgccatgtcctcc
tcccagacctccagcatccgggccaccccctccaggcagcaggcacctgtcctctctggc
tctcagccccaccggaagaagccccgcatgggcttctga
DBGET
integrated database retrieval system
