Ailuropoda melanoleuca (giant panda): 100475495
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Entry
100475495 CDS
T01329
Symbol
SMARCD2
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 2
KO
K11650
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D
Organism
aml
Ailuropoda melanoleuca (giant panda)
Pathway
aml03082
ATP-dependent chromatin remodeling
aml04714
Thermogenesis
aml05225
Hepatocellular carcinoma
Brite
KEGG Orthology (KO) [BR:
aml00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
100475495 (SMARCD2)
09150 Organismal Systems
09159 Environmental adaptation
04714 Thermogenesis
100475495 (SMARCD2)
09160 Human Diseases
09162 Cancer: specific types
05225 Hepatocellular carcinoma
100475495 (SMARCD2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
aml03021
]
100475495 (SMARCD2)
03036 Chromosome and associated proteins [BR:
aml03036
]
100475495 (SMARCD2)
Transcription machinery [BR:
aml03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
100475495 (SMARCD2)
Chromosome and associated proteins [BR:
aml03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
100475495 (SMARCD2)
PBAF complex
100475495 (SMARCD2)
GBAF(ncBAF) complex
100475495 (SMARCD2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIB
Motif
Other DBs
NCBI-GeneID:
100475495
NCBI-ProteinID:
XP_034496887
Ensembl:
ENSAMEG00000003062
UniProt:
G1L8Q6
LinkDB
All DBs
Position
13:complement(30896923..30906291)
Genome browser
AA seq
531 aa
AA seq
DB search
MSGRGAGGFPLPPLSPGGGAVAAALGAPPPPAGPGMLPGPALRGPGPAGGVGGPGAAAFR
PMGPAGPAAQYQRPGMSPGSRMPMAGLQVGPPAGSPFGTAAPLRPGMPPTMMDPFRKRLL
VPQAQPPMPAQRRGLKRRKMADKVLPQRIRELVPESQAYMDLLAFERKLDQTIARKRMEI
QEAIKKPLTQKRKLRIYISNTFSPSKAEGDTAGTAGPPGGTPAGDKVASWELRVEGKLLD
DPSKQKRKFSSFFKSLVIELDKELYGPDNHLVEWHRMPTTQETDGFQVKRPGDLNVKCTL
LLMLDHQPPQYKLDPRLARLLGVHTQTRAAIMQALWLYIKHNQLQDGHEREYINCNRYFR
QIFSCGRLRFSEIPMKLAGLLQHPDPIVINHVISVDPNDQKKTACYDIDVEVDDPLKAQM
SNFLASTTNQQEIASLDVKIHETIESINQLKTQRDFMLSFSTDPQDFIQEWLRSQRRDLK
IITDVIGNPEEERRAAFYHQPWAQEAVGRHIFAKVQQRRQELEQVLGIRLT
NT seq
1596 nt
NT seq
+upstream
nt +downstream
nt
atgtcgggccgtggcgcgggcgggttcccgctgcctccgctgagtcctggtggcggcgcc
gttgccgcggccctgggagcgccgcctccgccagcgggacccggcatgctgcccggaccg
gcgctcagggggccagggccggctggaggcgtggggggtcccggggccgccgccttccgc
cccatgggccccgcgggccccgcggcgcagtaccagcggcctggtatgtcaccagggagc
cggatgcccatggctggcttgcaggtgggaccccctgctggctccccgtttggcacagct
gctcctcttcgacctggcatgccacccaccatgatggacccattccgcaaacgcctgctt
gtgccccaggcccagcccccaatgcctgcccagcgccgggggttaaagaggaggaagatg
gcagataaagttctacctcagcgaattcgggagcttgtcccagagtctcaggcgtacatg
gatctcttggcttttgagcggaagctggaccagaccattgcccgaaagcggatggagatc
caagaggccatcaaaaagcctctgacgcaaaaacgaaagctgcgaatctatatttccaat
acgttcagtcccagcaaggcagaaggcgatactgcggggactgcagggccccctggggga
acccctgcaggggacaaggtggcttcctgggaactccgagtggagggaaaactgctggat
gatcctagcaaacagaagaggaagttttcttcattcttcaagagccttgttattgagctg
gacaaggaactgtacgggcctgacaaccacctggtggagtggcaccgaatgcccaccacc
caggagactgatggcttccaggtgaaacggcccggagacctcaacgtcaagtgcacgctt
ctgctcatgctggatcatcagcctccccagtacaaactggacccccgactggcaaggctg
ctgggggtgcacacacagactagggcagccatcatgcaggccctgtggctttatatcaaa
cacaaccagctgcaggacgggcacgagcgcgagtacatcaactgcaaccggtacttccgc
cagatcttcagttgtggccgacttcgtttctccgagattcccatgaagctggctgggttg
ctgcagcatccagaccccattgtcatcaaccatgtcattagtgtagacccaaacgaccag
aagaagacagcatgttatgacattgatgtggaggtagacgacccactcaaggcccagatg
agcaattttctggcctctacgaccaatcagcaggagattgcctcccttgatgtcaagatc
cacgagaccattgagtccatcaatcagctgaagactcagagggatttcatgctcagcttt
agcactgaccctcaggacttcatccaggaatggctccgttcccagcgccgagacctcaag
atcatcaccgatgtgattgggaatcctgaggaggagagacgagctgctttctaccaccag
ccctgggcccaggaagcagtcgggaggcacatttttgccaaggtgcagcagcgaaggcaa
gaactggaacaggtgctgggaatccgcttgacctaa
DBGET
integrated database retrieval system
