Ailuropoda melanoleuca (giant panda): 100475696
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Entry
100475696 CDS
T01329
Symbol
RXRB
Name
(RefSeq) retinoic acid receptor RXR-beta isoform X2
KO
K08525
retinoid X receptor beta
Organism
aml
Ailuropoda melanoleuca (giant panda)
Pathway
aml03320
PPAR signaling pathway
aml04659
Th17 cell differentiation
aml04919
Thyroid hormone signaling pathway
aml04920
Adipocytokine signaling pathway
aml04928
Parathyroid hormone synthesis, secretion and action
aml05200
Pathways in cancer
aml05202
Transcriptional misregulation in cancer
aml05207
Chemical carcinogenesis - receptor activation
aml05216
Thyroid cancer
aml05222
Small cell lung cancer
aml05223
Non-small cell lung cancer
aml05226
Gastric cancer
aml05417
Lipid and atherosclerosis
Brite
KEGG Orthology (KO) [BR:
aml00001
]
09150 Organismal Systems
09151 Immune system
04659 Th17 cell differentiation
100475696 (RXRB)
09152 Endocrine system
04920 Adipocytokine signaling pathway
100475696 (RXRB)
03320 PPAR signaling pathway
100475696 (RXRB)
04919 Thyroid hormone signaling pathway
100475696 (RXRB)
04928 Parathyroid hormone synthesis, secretion and action
100475696 (RXRB)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
100475696 (RXRB)
05202 Transcriptional misregulation in cancer
100475696 (RXRB)
05207 Chemical carcinogenesis - receptor activation
100475696 (RXRB)
09162 Cancer: specific types
05226 Gastric cancer
100475696 (RXRB)
05216 Thyroid cancer
100475696 (RXRB)
05222 Small cell lung cancer
100475696 (RXRB)
05223 Non-small cell lung cancer
100475696 (RXRB)
09166 Cardiovascular disease
05417 Lipid and atherosclerosis
100475696 (RXRB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
aml03000
]
100475696 (RXRB)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
aml03310
]
100475696 (RXRB)
Transcription factors [BR:
aml03000
]
Eukaryotic type
Zinc finger
Cys4 hepatocyte nuclear factor 4-like
100475696 (RXRB)
Nuclear receptors [BR:
aml03310
]
2. Hepatocyte nuclear factor 4 like
2B. Retinoid X receptor (RXR)
100475696 (RXRB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hormone_recep
zf-C4
Nuc_recep-AF1
Motif
Other DBs
NCBI-GeneID:
100475696
NCBI-ProteinID:
XP_002914382
Ensembl:
ENSAMEG00000001719
LinkDB
All DBs
Position
5:complement(28405176..28411847)
Genome browser
AA seq
532 aa
AA seq
DB search
MSWAARPPFLPQRHAAGQCGPVGVRKEMHCGVASRWRRRRPWLDPAAAAAAAAAGEQQTP
EPEPGEAGRDGMGDSGRDSRSPDSSSPNPLPQGAPPPSPPGLPLPPSAASSLGGSGAPPP
PPMPHPPLGSPFPVISSSMGSPGLPPPAPPGFSGPVSSPQINSTVSLPGGGSGPPEDVKP
PVLGVRGLHCPPPPGGPGAGKRLCAICGDRSSGKHYGVYSCEGCKGFFKRTIRKDLTYSC
RDNKDCTVDKRQRNRCQYCRYQKCLATGMKREAVQEERQRGKDKDGDGEGAGGAPEEMPV
DRILEAELAVEQKSDQGVEGPGGTGGSGSSPNDPVTNICQAADKQLFTLVEWAKRIPHFS
SLPLDDQVILLRAGWNELLIASFSHRSIDVRDGILLATGLHVHRNSAHSAGVGAIFDRVL
TELVSKMRDMRMDKTELGCLRAIILFNPDAKGLSNPSEVEVLREKVYASLETYCKQKYPE
QQGRFAKLLLRLPALRSIGLKCLEHLFFFKLIGDTPIDTFLMEMLEAPHQLA
NT seq
1599 nt
NT seq
+upstream
nt +downstream
nt
atgtcttgggctgctcgtccgcccttcctcccccagcggcatgccgcagggcagtgtggg
ccagtgggggtgcgaaaagaaatgcattgtggggtcgcctcccggtggcggcggcgacgg
ccctggctggatcccgcagcggcggcggcggcggcagcagccggagaacaacaaaccccg
gagccggagccgggggaggctggacgggacgggatgggcgacagcgggcgggactcccga
agcccagacagttcctccccgaatccccttccccagggggcccctccgccttctcctcct
gggctacccttaccaccttcagcagcctcatcccttggaggctccggggccccaccccca
cccccgatgccacaccccccactgggctccccattcccggtcatcagctcttccatgggg
tcccctggtctgccccctccagctcccccaggattctccgggcctgtcagcagtccccag
attaactcaacagtgtcgctccctgggggtgggtctggcccccctgaagatgtgaagcca
ccagtcttaggggtccggggcctgcactgtccaccccctccaggtggccctggggctggc
aaacggctatgtgcaatctgcggggaccgaagctcaggcaaacactatggggtttacagc
tgtgagggctgcaaaggcttcttcaagcgcaccatccgtaaggacctgacatactcgtgc
cgggacaacaaggactgcaccgtggacaagcgccagcgaaaccgctgtcagtactgccgc
tatcagaagtgcctggccaccggcatgaagagggaggcggtacaggaggaacgtcagcgg
gggaaggacaaggacggggatggggagggggctgggggagcccccgaggagatgcctgtg
gacaggatcctggaggcagagcttgctgtggagcagaagagtgaccagggcgttgagggt
cctgggggaaccgggggtagcggcagcagcccgaatgaccctgtgactaacatctgtcag
gcagctgacaaacaactattcacgcttgttgagtgggcgaagaggatcccacacttttcc
tccttgcctctggatgaccaggtcattttgctacgggcaggctggaatgagctcctcatt
gcttccttctcccaccgatccattgatgtccgagatggtatcctcctcgccacaggtctt
catgtgcaccgcaactcagcccattctgcaggcgtgggagccatctttgatcgggtgctg
acagagctagtgtccaaaatgcgtgacatgaggatggacaagacagagcttggctgcctg
agggcaatcattctgttcaatccagacgccaagggcctctccaaccctagtgaggtggag
gttctgcgggagaaagtgtacgcgtcactggagacctactgcaagcagaagtaccctgag
cagcagggacggtttgccaagttgctgctacgtcttcctgccctcaggtccatcggcctt
aagtgtctagagcatctgtttttcttcaagctcattggagacacccccattgacaccttc
ctcatggagatgcttgaggctccccaccagctggcctga
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