KEGG   Ailuropoda melanoleuca (giant panda): 100475700
Entry
100475700         CDS       T01329                                 
Symbol
CTCFL
Name
(RefSeq) transcriptional repressor CTCFL
  KO
K23195  transcriptional repressor CTCF
Organism
aml  Ailuropoda melanoleuca (giant panda)
Brite
KEGG Orthology (KO) [BR:aml00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:aml03000]
    100475700 (CTCFL)
   03036 Chromosome and associated proteins [BR:aml03036]
    100475700 (CTCFL)
Transcription factors [BR:aml03000]
 Eukaryotic type
  Zinc finger
   Cys2His2 others
    100475700 (CTCFL)
Chromosome and associated proteins [BR:aml03036]
 Eukaryotic type
  Chromatin remodeling factors
   Other chromatin remodeling factors
    100475700 (CTCFL)
SSDB
Motif
Pfam: zf-H2C2_2 zf-C2H2 zf-C2H2_4 zf-H2C2_5 zf-C2H2_16 Zf-C2H2_ZNF451_C zf-C2H2_15 zf-C2H2_ZN142 Zn_ribbon_8 zf-C2H2_7th_ZNF462 tRNA-synt_2d C2CH-3rd_BIRD-IDD zf-C2H2_REST
Other DBs
NCBI-GeneID: 100475700
NCBI-ProteinID: XP_034496824
Ensembl: ENSAMEG00000012766
LinkDB
Position
13:50476853..50503996
AA seq 635 aa
MAGTEISVPSEQFTKIKSLELIPEVLFEDEEDGACRGRGPPGPGDVQAPCPYGPLQAQAP
EGEQKPLLTTEESEKHILTLQTVQFSEAVEVQDVSWLSAQPQEGVQVTVQQAGGRLQSEL
WLGQGFQQCVAISIQEEAYVLQDMEVMELHALEGGLAVASEESKCAVSLAESAGLLKLEK
GQEEDQLLAEGGLDPQAGEQLFLVEAKPGDEGRDEIVLTISNLHVEEQEDKPACVQGHVE
KANSTKKPKKTKEVKRTFQCDMCMFTASRISSFNRHMKTHTAEKPHMCHLCLKAFRTVTL
LRNHVNTHTGTKPYKCGDCDMAFVTSGELVRHRRYKHTHEKPFKCSLCKYASVEASKLKR
HVRSHTGERPFQCLLCTYASKDTYKLKRHMRTHSGEKPYECHVCHARFTQSGTLKIHILQ
KHSENVPKYQCPHCATIIARKSDLRVHLRNLHTYKATEMKCRCCSAVFHERYALIQHQKT
HKNEKRFKCDHCGYACKQERHMTVHIRTHTGEKPFTCLACNKCFRQEQLFNAHFKKYHDA
SFVPAVYACPACGKGFSRWTNMQRHSAKCGVGPGKPAASGKARRTKRKPAAPKEAVQEDE
AAAKEVSAVRLEQCPGDVVPVPYGGITAEEVTCDG
NT seq 1908 nt   +upstreamnt  +downstreamnt
atggcagggactgagatctctgtcccttccgagcagtttaccaaaatcaaatcactggag
ctgatcccagaagtcctattcgaggacgaggaagacggagcatgcagagggagggggccc
ccgggccccggagacgtgcaggccccgtgcccctacggacccctccaggcccaggcgccg
gagggagagcagaagccgctgctcaccacggaggagagcgagaagcacattctgaccctg
cagacggtgcagttctccgaggccgtggaggtgcaggacgtcagctggctcagcgcgcag
ccccaggagggcgtgcaggtgacggtccagcaggcgggcggcaggctgcagtctgagctg
tggctgggccaggggttccagcagtgcgtagccatcagcatccaggaggaggcgtacgtg
ctgcaggacatggaggtgatggagctgcatgctctggaaggcggcttggccgtggccagt
gaggagagtaagtgtgcggtgagcctggccgagagcgccggactgctgaagcttgagaaa
ggccaggaggaggaccagctgctggctgaaggaggactcgatccacaggcgggagagcag
ctctttcttgtggaagcgaagccaggagatgaagggagagacgaaattgtgctgaccatt
tcaaacttgcacgtggaagaacaagaagataaacctgcatgcgttcaaggccacgttgag
aaagccaactctacaaaaaaaccaaaaaagacgaaggaagtaaaacgaaccttccagtgt
gatatgtgcatgttcaccgcttctagaatttcgagttttaatcgtcacatgaaaactcac
acggctgaaaagccccatatgtgccatctttgcctaaaagcctttcgcaccgtcactctt
ctgaggaatcatgtcaatacgcacacaggaaccaagccctacaagtgtggtgactgtgat
atggcgtttgtcaccagcggagaacttgtccgacacagacgttataaacacactcacgag
aagccctttaaatgctccctgtgcaagtatgccagcgtggaagccagtaagctgaagcgc
cacgtccgctcgcacacgggggagcgccccttccagtgccttctgtgcacctacgccagc
aaggacacctacaagttgaaacggcacatgaggacgcactcaggtgagaagccgtacgaa
tgccacgtgtgccacgcacgcttcacccagagtggcaccctgaaaatacacatcctacag
aagcacagcgagaatgtccccaaataccagtgtccgcactgtgccaccatcatcgcaagg
aagagtgacctgcgcgtccatctgcgcaacctgcacacctacaaggccacagagatgaag
tgtcgctgctgctctgccgtcttccacgagcgctatgccctcattcagcaccagaagacg
cataagaacgagaagaggttcaagtgtgaccactgcggttatgcctgcaagcaggaacgt
cacatgaccgttcacatacgcacgcacaccggggagaagccgttcacctgcctcgcgtgc
aataaatgtttccgacaggagcagcttttcaatgcgcacttcaagaaataccacgacgcg
agtttcgtcccggctgtgtacgcctgccccgcgtgcggcaagggcttctcccgctggact
aacatgcagagacactcggccaagtgtggcgtggggccaggaaagccagctgcctcgggg
aaagcgagaagaaccaagagaaagcctgccgccccaaaagaggcagtccaggaagacgaa
gcggccgctaaggaggtgtccgccgtgaggctggagcagtgcccgggagacgtggttcct
gtcccctacggaggcatcacagctgaagaagtgacctgtgacggctaa

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