Ailuropoda melanoleuca (giant panda): 100475838
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Entry
100475838 CDS
T01329
Symbol
VARS2
Name
(RefSeq) valine--tRNA ligase, mitochondrial isoform X2
KO
K01873
valyl-tRNA synthetase [EC:
6.1.1.9
]
Organism
aml
Ailuropoda melanoleuca (giant panda)
Pathway
aml00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
aml00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
100475838 (VARS2)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
aml01007
]
100475838 (VARS2)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
aml03016
]
100475838 (VARS2)
Enzymes [BR:
aml01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.9 valine---tRNA ligase
100475838 (VARS2)
Amino acid related enzymes [BR:
aml01007
]
Aminoacyl-tRNA synthetase
Class I (U)
100475838 (VARS2)
Transfer RNA biogenesis [BR:
aml03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
100475838 (VARS2)
Prokaryotic type
100475838 (VARS2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1
Anticodon_1
tRNA-synt_1g
tRNA-synt_1_2
tRNA-synt_1e
FmiP_Thoc5
Motif
Other DBs
NCBI-GeneID:
100475838
NCBI-ProteinID:
XP_011235062
Ensembl:
ENSAMEG00000012997
UniProt:
G1M340
LinkDB
All DBs
Position
5:26529219..26540722
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AA seq
1062 aa
AA seq
DB search
MPHLPLASFRSPFWGLKPSQGFPRFQPLSTHSKSHGSSISRRNHEAKQKRQREKQAALEA
GIAGKSKSPAEFSKAWTPKEVVLYEIPTEPGEKKDVSQLLRPAYSPRYVEAAWYSWWVRE
GFFKPEYQTKLPQATGETFSMCIPPPNVTGSLHIGHALTVAIQDALVRWHRMCGDQVLWV
PGSDHAGIATQAVVEKQLWKERGVRRHELSREEFLREVWKWKEEKGGEISEQLQALGASL
DWDRECFTMDAGSSAAVTEAFVRLYEAGLLYRSQQLVNWSCALRSAISDMEVESRPLPGR
TELRLPGCPTPVSFGLLVSVAFPVDGEPDAEVVVGTTRPETLPGDVAVAVHPDDSRYTHL
HGRQLRHPLTGQLLPLITDSAVQPHVGTGAVKVTPAHSPADAELGARHGLSPRNVIAEDG
TMTSLCGDWLQGLHRFVAREKIMSALRERGLFRGLRNHPMVLPICSRSGDVVEYLLKDQW
FVRCREMGDRAAQAVESGALELSPSFHQKNWQHWFSHIGDWCVSRQLWWGHRIPAYLVVG
EHTKGDKEDCWVVGRTEAEARKIAAELTGKPGTELTLHRDPDVLDTWFSSALFPFAALGW
PQETPDLARFYPLSLLETGSDLLLFWVGRMVMLGTQLTGQLPFSKVLLHSMVRDRQGRKM
SKSLGNVLDPRDIISGVELQVLEAKLRDGNLDSTELAIAAAAQRKDFPHGIPECGTDALR
FALCSHGALGGDLHLSVSEVLSSRHFCNKIWNALRFILNALGEKFVPQPTEELSPSSPMD
TWILSRLAHTAWECERGFLARELSLITHALRRFWLHSLCDVYLEAVKPVLLHSPHAPGPP
QVLFSCADVGLRLLAPLMPFLAEELWQRLPRRPGGRSAPSICVAPYPAARGLEHWRQPEL
EQRFSRVQEAVQALRALRATYQLTKARPRVLLQSSEPREQGLFEAFLEPLGTLGHCAAVG
LLPPGVAAPSGWAQATLGDTTQVYMELQGLVEPRAHLSLLAARRHKLQKQLDGLMAQTPS
DGESEAKRQQRLSSLQLELLKLDKAASHLRQLMDVCPGPGQL
NT seq
3189 nt
NT seq
+upstream
nt +downstream
nt
atgcctcatttgcctttggcctcttttcgatcaccattctgggggctgaagccctcacag
ggcttccccaggttccagcccctctctacccactcaaagtcccatggatcctctatctcc
cggaggaaccatgaagccaagcagaagcgccagcgagagaagcaggcggcgctggaggct
gggatagccggaaagagcaagtcacctgcagaattcagtaaggcctggactcctaaggag
gtagtgttgtatgaaatccccacggaacccggtgaaaagaaagatgtctcccagctcctg
cgtcctgcatacagcccccgatacgttgaggctgcctggtactcttggtgggtgcgagag
ggcttcttcaaaccagagtatcagaccaagctgccccaggctacaggggagaccttttcc
atgtgtatcccacctcccaatgtcactggctccctacatatcgggcatgccctgacggtg
gccatacaggatgccctggtgcgctggcaccggatgtgtggggatcaggtgctgtgggtc
cctggctcagatcatgcaggaattgctacacaagctgtggtggaaaagcaactgtggaag
gagcgaggagtgaggagacatgagctgagcagggaagagttccttagggaggtgtggaag
tggaaggaggagaaaggtggagagatcagtgagcagctccaagctctgggggcctccctg
gactgggaccgagagtgcttcactatggatgctggctcctcagcggctgtgactgaagct
tttgtgcgactctacgaggcagggttgttgtaccggagccagcagcttgtcaactggtcc
tgtgctctaagatcagccatctcggatatggaggtggagagccggcccctgcctggccgc
acagagcttcgactgcctggctgccccactcctgtgtcttttggcctccttgtttctgtg
gccttccctgtggatggagagcctgatgcagaggttgtggtaggaaccacaaggccagag
acattgcctggagacgtggctgtggctgttcatcctgacgactcccgatacacacatctg
catgggcgacagcttcgtcaccccttgaccgggcagcttctccctctcatcacagactct
gctgttcagccacatgtgggcacaggggcagtgaaggtgactccagcgcatagccctgct
gatgctgagctgggggcccggcacggcttgagcccccggaatgtcatcgcagaggatggc
accatgacctccctctgcggggactggctacagggtcttcaccgatttgtggcccgggaa
aagatcatgtcagcgctgagggagcggggcctgttccggggcctccggaaccaccccatg
gtgcttcctatttgcagccgttctggggacgtggttgaatacctactgaaggaccagtgg
tttgtccgctgccgggagatgggggaccgagccgcccaggccgtggagtcaggggctctg
gagctcagtccgtccttccaccagaagaactggcagcactggttttcccacatcggggac
tggtgtgtctcccggcagctgtggtggggccatcggattcccgcctacctggtggtaggg
gagcacacgaagggggataaggaggactgttgggtggttgggcggacagaggccgaggcc
agaaaaatagctgcagaactgacagggaaaccagggacagagctgaccctgcacagggat
cctgatgtcctggacacatggttctcttcggctcttttcccctttgctgccctgggctgg
ccccaagagaccccagaccttgctcgtttctaccccctgtcacttttggaaacgggcagt
gaccttctgttgttctgggtgggccgcatggtcatgttggggacccagctcacagggcag
ctccccttcagcaaggtgcttctccattctatggttcgggacaggcagggccggaagatg
agcaagtccctggggaatgtgttggacccacgagacatcatcagtggggtggagctgcag
gtgctggaggcaaagctgagggatgggaacttggactccacagagctggcgatcgcggct
gcagcccagagaaaggactttcctcatgggatccctgagtgtgggacagatgccctgcga
ttcgccctgtgctctcacggggccttgggaggcgacttgcacctgtctgtctctgaggtc
ctgagttcccggcatttctgcaacaaaatctggaatgccctgcgctttatcctcaatgcc
ttaggggagaaattcgtaccccagcctacagaggagctgtccccctcatcccccatggac
acctggatcttgagccgtcttgcccacactgcctgggagtgtgagcgaggcttccttgct
cgagagctctcactcatcacccatgccctgcgccgcttctggctgcacagcctctgtgac
gtctacttggaggctgtgaagccagtgctgttgcactcgccccatgccccaggccccccg
caggtcctgttctcctgtgctgacgtcggtctccgcctcctcgccccactgatgcccttc
ctggctgaagagctctggcagaggctgccccgcaggcctggcggccgctctgcccccagc
atctgtgtcgctccctaccccgctgcccgcggcctggagcactggcgccagcccgagctg
gagcagcgcttctcccgggtgcaggaggccgtgcaggcactgagggctctccgagccaca
taccagctcaccaaggcccggccgcgagtgctgctgcagagctcagagcctagagagcag
ggcctctttgaggccttcctggagcccctgggcaccctgggccactgtgcggccgtgggc
ctcttgccccctggtgtagcggcgccctctggctgggcccaggccacactcggcgacact
actcaggtgtacatggagctgcagggcctggtggagccccgggcccacctgtctctgcta
gctgcccggagacacaagttgcaaaagcagctcgacggcctcatggctcagaccccatca
gacggagaatcagaggcgaagaggcagcagaggctttcttccctccagctggaactgttg
aagctggacaaggctgcctctcacctccggcagctgatggatgtgtgtcccggccccggg
cagctctga
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integrated database retrieval system
