Ailuropoda melanoleuca (giant panda): 100475912
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Entry
100475912 CDS
T01329
Symbol
NPHP1
Name
(RefSeq) nephrocystin-1 isoform X1
KO
K19657
nephrocystin-1
Organism
aml
Ailuropoda melanoleuca (giant panda)
Brite
KEGG Orthology (KO) [BR:
aml00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
aml03037
]
100475912 (NPHP1)
Cilium and associated proteins [BR:
aml03037
]
Primary cilia and associated proteins
Nephronophthisis-related proteins
100475912 (NPHP1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SH3_1
SH3_9
SH3_2
Merozoite_SPAM
hSH3
Motif
Other DBs
NCBI-GeneID:
100475912
NCBI-ProteinID:
XP_011232843
Ensembl:
ENSAMEG00000009646
UniProt:
G1LT10
LinkDB
All DBs
Position
4:109300230..109359063
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AA seq
691 aa
AA seq
DB search
MLAKRQRNPLQALQRRSQELKLQVDSLLSESRLKGALDASKRRDIYQRCIQLKQAIDENK
NALQKLNKADEPAPVGNYNQKKEEEHSLLDKLTHQLQELAVSISRENTTEIGAPTEREED
DDSADEDEEAEEEDDDDEEEESEESGGEEEETEEEEKQENESHHQAASQEYVAVGDFTAQ
QAGDLTFKKGEILLIIEKKPDGWWIAKNAKGNKGLIPRTYVEAYNKEEGQDSSEEGSEEE
DVEVGDQTAEGEEVKQRTDSHWSAVRKAISEQINTVDVLTTMGAIPAGFRPSTLFQLLEE
GNQFRASYFLQPKLTPSQLAFSDLLWDAKTGTIRSRPSRVSFILTLWSCKMIPLPGMSIQ
VLSRHVRLCLFDGNKVLSNIHTVRATWQPKKPKTWTFSPQVTGILPCLLDGDCFIRSNSS
SPDLGLLFELGISYIRNSTGERGELSCGWVFLKLFDASGIPIPAKTYELFLNGGTPYEKG
VEVDPSVSRRAHGSVFHQMMTMRRQPQLLVKLRSLNRRSRDLLSLLPETLIGSMCSIHLL
IFYRQILGDVLLKDRMSTQSTDLVSNLVLATFPQLLEQPDMMDALRSSWAEKESTLKRSE
KRDKEFLKATFLLVYHDCVVPLLHSTLLPPFRWAEEETEAARWKFIADFLKQNQENEGAL
QALLSPDGVHEPFDISEQTYDFLGEIRKNAA
NT seq
2076 nt
NT seq
+upstream
nt +downstream
nt
atgctggctaagcggcagcgcaatcctctgcaggccctgcagcgccgcagtcaggaattg
aagctacaggttgatagcttgctttctgagagtcgattgaaaggagctctagatgccagt
aaaaggagagatatttatcaaagatgtatccagttaaaacaggcaatagatgaaaataaa
aatgctcttcaaaaattaaacaaagctgatgaacctgcacctgtcgggaactataaccag
aaaaaagaggaggagcacagtcttttggataagcttacccaccaactgcaggaactcgcc
gtgtccataagtagagaaaatacaactgaaatcggggcacctaccgaaagagaggaagat
gacgattctgctgatgaagatgaagaagctgaagaagaagacgatgacgatgaagaagaa
gagagtgaagaaagtggtggggaggaggaagagacagaagaggaagagaagcaggaaaat
gaatcccaccaccaggcagcaagtcaagaatacgttgccgttggagattttactgctcag
caagctggggatcttacatttaagaaaggggaaattctccttataattgaaaaaaaacct
gatggttggtggatagctaagaatgccaaaggaaacaaaggtctcattcccagaacctac
gtggaggcctataataaagaagaaggccaagactcaagtgaagaaggcagtgaagaagaa
gacgtagaggtgggggaccaaacagcagaaggggaagaagttaaacaaagaactgattct
cactggagtgctgtccgaaaagctatctcagagcagatcaacactgtcgatgtgttgacc
acaatgggagctattcctgcagggttcaggccttccacgctcttccagcttctggaggaa
gggaatcaatttcgagcaagttacttcttacagccaaagctcactccttcacaactggcc
ttcagcgatctactgtgggatgctaaaacaggcactattaggtcaagaccaagtcgtgtt
tcattcattctgaccctctggagctgtaaaatgattcctcttccaggaatgagcatccag
gttctcagtagacacgtacgcctctgtctatttgatggtaataaggttctgagcaacatt
catacagtcagagctacgtggcaacctaaaaagcccaaaacatggaccttttctccccag
gttactggcatcttgccctgcttgctcgatggtgactgttttatcagatccaattcttcc
tctccagatcttggactattatttgaacttggaatttcttatattcgcaattcaaccggt
gaaagaggagaattaagttgtggctgggtgtttcttaaacttttcgatgccagtggaatt
cctattccagcaaaaacgtatgagctcttcttgaatggtggcaccccttatgagaaaggt
gttgaagtggacccttcggtatccagaagagcacacgggagtgttttccatcagatgatg
acaatgagaaggcagcctcaactcctagtaaaactgaggtctttgaacagaagatcaaga
gacttgctgagtttactgccagaaacattaattggaagtatgtgttccattcacttgttg
atattttatcgccaaattctcggagatgtactcctgaaagacaggatgagcacgcaaagc
actgatttagttagtaacctagtgttggccaccttcccccagctcttggagcagcctgac
atgatggacgctctcaggagttcatgggctgagaaagaaagcacattaaaaagatcagag
aagagagacaaagagttcctgaaggccacgtttctcctggtttaccatgactgtgtggtc
cctcttctgcattccacactccttcccccgttcaggtgggcagaagaggagacagaggct
gcccggtggaagtttattgctgacttccttaagcaaaaccaagaaaacgagggtgcactc
caagctctgctgtcgccagatggagtccatgaacctttcgacatttcagagcagacctat
gacttcttgggtgaaataagaaagaatgcagcctga
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