Ailuropoda melanoleuca (giant panda): 100475986
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Entry
100475986 CDS
T01329
Symbol
HMG20B
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1-related isoform X1
KO
K24650
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1-related
Organism
aml
Ailuropoda melanoleuca (giant panda)
Brite
KEGG Orthology (KO) [BR:
aml00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
aml03036
]
100475986 (HMG20B)
Chromosome and associated proteins [BR:
aml03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
BRAF-HDAC complex
100475986 (HMG20B)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
DUF4763
MlaC
DASH_Duo1
Caudo_TAP
PI3K_P85_iSH2
Motif
Other DBs
NCBI-GeneID:
100475986
NCBI-ProteinID:
XP_034513379
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All DBs
Position
4:2551518..2556781
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AA seq
317 aa
AA seq
DB search
MSHGSKQPGAAAAPAGGKAPGQHGGFVVAVKQERSEGPRAGEKGSHEEEPVKKRGWPKGK
KRKKILPNGPKAPVTGYVRFLNERREQIRTRHPDLPFPEITKMLGAEWSKLQPAEKQRYL
DEAEREKQQYMKELRAYQQSEAYKMCTEKIQEKKIKKEDSGSGLMNTLLNGHKGGDCDGF
STFDVPIFTEEFLDQNKAREAELRRLRKMNVAFEEQNAVLQRHTQSMSSARERLEQELAL
EERRTLALQQQLQAVRQALTASFASLPVPGTGETPTLGTLDFYMARLHGAIERDPAQHEK
LIVRIKEILAQVASEHL
NT seq
954 nt
NT seq
+upstream
nt +downstream
nt
atgtcccacggctccaagcagcccggcgcggccgccgcgccggcgggcggcaaggctccg
ggacagcatgggggcttcgtggtggctgtcaagcaagagcgcagcgagggcccccgggcc
ggcgagaaggggtcccacgaggaggagcctgtgaagaagcgcggctggcccaagggcaag
aagcggaagaagatactgccaaatgggcccaaggcaccggtcaccggctacgtgcgcttc
ctgaacgagcggcgtgagcagattcgcacgcgccacccagatctgccctttcccgagatc
accaagatgctcggtgccgagtggagcaagctgcagccggcggagaagcagcggtacctg
gatgaggccgagcgggagaagcagcagtacatgaaggagctgcgtgcgtaccagcagtca
gaagcctacaagatgtgcacggagaagatccaggagaagaagatcaagaaagaagactcg
ggctctgggctcatgaataccctcttgaatggacacaagggtggggactgtgatggcttc
tccaccttcgacgtccccatcttcaccgaagagttcttggaccaaaacaaagcgcgggag
gcagagctgcggcgcctgcgcaagatgaacgtggccttcgaggagcagaacgccgtgctg
cagaggcacacgcagagcatgagcagcgcgcgggagcgcctggagcaggagctggcgctg
gaggagcggcggacgctggcgctacagcagcagctccaggcggtgcgccaggcgctcacc
gccagcttcgcctcgctgcccgtgccgggcacgggagagacgcccaccctcggcaccctg
gacttctacatggctcggctgcacggtgccatcgagcgcgaccccgcccagcacgagaag
ctcatcgtccgcatcaaggagatcctggcccaggtcgccagtgagcacctgtga
DBGET
integrated database retrieval system
