KEGG   Ailuropoda melanoleuca (giant panda): 100475996
Entry
100475996         CDS       T01329                                 
Symbol
KDM4C
Name
(RefSeq) lysine-specific demethylase 4C isoform X1
  KO
K06709  [histone H3]-trimethyl-L-lysine9/36 demethylase [EC:1.14.11.66 1.14.11.69]
Organism
aml  Ailuropoda melanoleuca (giant panda)
Brite
KEGG Orthology (KO) [BR:aml00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:aml03036]
    100475996 (KDM4C)
Enzymes [BR:aml01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.66  [histone H3]-trimethyl-L-lysine9 demethylase
     100475996 (KDM4C)
    1.14.11.69  [histone H3]-trimethyl-L-lysine36 demethylase
     100475996 (KDM4C)
Chromosome and associated proteins [BR:aml03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    100475996 (KDM4C)
SSDB
Motif
Pfam: JmjC zf-HC5HC2H_2 Tudor_2 zf-HC5HC2H PHD_2 JmjN PHD LBR_tudor DUF7141 Tudor_5 Rad9_Rad53_bind SLX1_C
Other DBs
NCBI-GeneID: 100475996
NCBI-ProteinID: XP_011230788
Ensembl: ENSAMEG00000000360
LinkDB
Position
7
AA seq 1207 aa
MHDSKPNLRTARKTNPQSKKVPGISLSCLEVHVTHQVPGPGGHVTARAPSRRESRQALCA
RLRRCLASPRREGEEPRSDQASGGRCACAANSCHPVRNKSSKFPKFPWAEGHPLPPHLPP
LGRIPVPTRAPETAPAIMEVAEVESPLNPSCKIMTFRPSMEEFREFNKYLAYMESKGAHR
AGLAKVIPPQEWKPRQCYDDIDNLLIPAPIQQMVTGQSGLFTQYNIQKKAMTVKEFRQLA
NSGKYCTPRYLDYEDLERKYWKNLTFVAPIYGADINGSIYDEGVDEWNIARLNTVLDVVE
EECGISIEGVNTPYLYFGMWKTTFAWHTEDMDLYSINYLHFGEPKSWYAIPPEHGKRLER
LAQGFFPSSSQGCDAFLRHKMTLISPSVLKKYGIPFDKITQEAGEFMITFPYGYHAGFNH
GFNCAESTNFATVRWIDYGKVAKLCTCRKDMVKISMDIFVRKFQPDRYQLWKQGKDIYTI
DHTKPTPESTPEVKAWLQRRRKVRKASRSFQCTGSHSKRFRNEGDEEVSPVVDGAEGLTP
DPDPEDLKVNEKPEKAVKMGNTEAPSEEEASPSRKQLDQNSSDNIKLPGNGCLSTSITEE
IQTKDEQAYGVILPSNPSEADDSISGGHATSKESDPPKLPWPKSPESCSSVAESNSVLTE
GEESDVESRRSGFEPGEVPPISSGEGNGLEVPGRIEGETKTAKSWRHPLSKPPARSPLTL
VKQQATSDEELPEVPSIEEEVEETESWAKPLVHLWQTKSPNFVAEQEYNAAMARMEPHCA
ICALLMPYFKPDSSNEENDSRWETKLDEVVTPGGKTKPLIPEMCFIYSEENIDYSPPNAF
LEEDGTSLLISCAKCRVRVHASCYGIPSHEICDGWLCARCKRNAWTAECCLCNLRGGALK
ETKNNKWAHVMCAVAVPEVRFTNVPERTQIDVGRIPLQRLKLKCIFCRHRVKKVSGACIQ
CSYGRCPASFHVTCAHAAGVLMEPDDWPYVVNITCFRHKVNPNVMNKLRLIKVQDHKITQ
LKSKAGEKGISVGQTVITKHRNTRYYSCRVIAVTSQTFYEVVFDDGSFSRDTFPEDIVSR
DCVKLGPPAEGEVVQVKWPDGKLYGAKYLGSNVAHMYQVEFEDGSQIAMKREDIYTLDEE
LPKRVKARFSTASDMRFEDTFYGADIIQGEKKRQRVLSSRFKNEYVDDPVYRTFLKSSFQ
KKCQKRQ
NT seq 3624 nt   +upstreamnt  +downstreamnt
atgcacgacagcaaacctaacttaagaacagcacggaagactaacccccaaagcaagaag
gtgcccggcatttctttaagctgtttggaagttcacgtgacccaccaagtgccggggccc
ggtggtcacgtgacagcgcgcgcgccctcgcgccgcgagagccggcaggcgctgtgcgcg
cgccttcgccgctgcctcgcatcccctcgacgggagggtgaggagccgcggagtgatcag
gcgtctgggggccggtgcgcgtgcgcagcgaacagctgtcacccagtgcggaacaagtct
tccaaatttcccaaatttccctgggccgaaggccaccctcttcctcctcatcttcctcct
ctgggtcgtatcccggtccctacccgcgcgccagagactgccccagccatcatggaggtg
gccgaggtggagagtcctttgaaccccagctgtaagatcatgaccttcagaccctccatg
gaggagttccgggagttcaacaaatacctcgcatacatggagtctaaaggagcccatcga
gcaggtcttgcaaaggtgattcctcctcaggaatggaagccaaggcagtgctatgatgac
attgataatttgcttattccagcaccgattcagcagatggtcacagggcagtcgggactg
ttcactcaatacaacatccagaaaaaagccatgacagtgaaggagttcaggcagctggct
aacagtggcaaatactgtactccaagatacttggattatgaagacttggagcgcaagtac
tggaagaacttaacttttgtggcacccatctatggcgcagacatcaatgggagtatatat
gatgagggtgtggacgaatggaacatagctcgcctaaatacagtcttggatgtggttgaa
gaagagtgcggtatttctatagaaggtgtaaataccccttatctctattttggcatgtgg
aaaaccacattcgcgtggcacaccgaggatatggacctctacagcattaattatctccac
tttggagagcccaagtcttggtatgcaatacccccggaacatggaaaacgacttgaaaga
ctagctcaaggttttttcccaagcagttctcaaggatgtgatgcatttcttcgccacaag
atgacactgatatctccctcagtattaaagaagtatggtattccctttgacaagatcact
caggaggctggagaatttatgatcacttttccatatggctaccatgctggttttaatcat
ggcttcaactgtgcagaatctacaaattttgctacagtcagatggattgactatgggaaa
gtcgctaaattgtgcacctgcaggaaagacatggtgaaaatctcaatggatatttttgtg
aggaaatttcagccagacagatatcagctttggaagcaaggaaaagatatatacaccatt
gatcacacaaagcctactccagaatccacacctgaagtaaaagcatggctgcagaggagg
aggaaagtaagaaaagcatctaggagcttccagtgcactggttctcactctaagaggttt
aggaatgagggagatgaagaagtgtcacctgtagttgatggggcagagggcctcacccct
gacccagacccagaagatctcaaggtcaatgaaaaaccagaaaaagcagtgaagatgggg
aacacagaagcaccttcagaagaagaggcttctcctagcaggaagcagctggatcagaat
tcatcagataatatcaaactcccaggaaacggttgcttaagcacatccataacagaggaa
atacaaactaaggatgaacaagcctatggtgtaattctaccttcaaatcccagtgaagct
gatgattccatatctggtggccatgcgacatccaaggaatcagacccacccaagctccca
tggccaaagtcacctgagtcatgttcctcggtggcagagagtaatagtgtgttgacagag
ggagaagagagtgatgtggagagccgcaggagtggcttcgaacctggagaagtcccacca
atctccagtggagagggaaatggcctcgaagtccctggtagaatagagggagaaaccaaa
actgctaaaagttggcgccatccactgagtaagcctccagcaagatccccactgactctg
gtgaagcagcaggcaacaagtgatgaagaattacctgaggttccatcaattgaggaggaa
gtggaagaaacggagtcttgggcgaagcctttggtccacctttggcagacgaagtcccca
aactttgtggctgaacaggagtataatgcagccatggccagaatggagccacactgtgcc
atctgtgctctcctcatgccctacttcaagccagatagcagcaatgaagaaaatgattct
agatgggagacaaaattagacgaagtggttactccaggaggaaagactaagcccctcatt
ccagagatgtgttttatttatagtgaagaaaatatagactattctccacctaacgccttt
ctggaagaggatggaacaagtcttctgatttcctgtgcaaagtgccgtgtacgggttcat
gcaagttgctatggtatcccttctcatgagatctgtgacggatggctatgtgcccgttgc
aaaagaaatgcgtggacagcagagtgctgtctttgcaatttgagagggggtgctcttaaa
gaaacaaagaacaataagtgggcccatgtcatgtgtgctgttgcggtcccagaagttcga
ttcactaatgtcccagaaaggacacagatagatgtaggcagaatacctttacagaggtta
aaattgaaatgcatcttctgcagacaccgggttaagaaggtctctggagcctgtattcag
tgttcctatggccgctgcccagcgtccttccatgtcacgtgtgctcatgctgctggggtg
ctgatggagcctgacgattggccatacgtggtgaacatcacatgctttcgacataaggtc
aacccaaatgtgatgaacaaactgaggctgataaaggttcaagatcacaagatcacacag
ctaaagtccaaggctggcgagaagggtatctctgtggggcagacagtcatcacaaagcat
cggaacacccgctattacagctgcagggtgattgctgtgacatcgcagaccttctatgag
gtcgtgtttgacgatggctccttcagcagagacacattccctgaggatatagtgagccga
gactgtgtgaaactgggccctcctgccgagggagaagttgtccaagtcaagtggcctgat
ggcaaactctatggggcaaaatatctgggatcaaatgttgcccacatgtaccaggttgaa
tttgaagatggatcccagatagcaatgaagagagaggatatctacactttagacgaagaa
ttacccaagagagtgaaagctcgtttttccacagcctctgatatgcggtttgaagacaca
ttttatggagcagacataatccaaggggagaaaaagagacaaagagtgctgagctccagg
tttaagaatgagtatgtggatgaccctgtgtaccgtactttcttgaagagctctttccag
aaaaaatgccagaagagacaatga

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