KEGG   Ailuropoda melanoleuca (giant panda): 100476032
Entry
100476032         CDS       T01329                                 
Symbol
KDM5A
Name
(RefSeq) lysine-specific demethylase 5A
  KO
K11446  [histone H3]-trimethyl-L-lysine4 demethylase [EC:1.14.11.67]
Organism
aml  Ailuropoda melanoleuca (giant panda)
Brite
KEGG Orthology (KO) [BR:aml00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:aml01009]
    100476032 (KDM5A)
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:aml03036]
    100476032 (KDM5A)
Enzymes [BR:aml01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.67  [histone H3]-trimethyl-L-lysine4 demethylase
     100476032 (KDM5A)
Protein phosphatases and associated proteins [BR:aml01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     100476032 (KDM5A)
Chromosome and associated proteins [BR:aml03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    100476032 (KDM5A)
SSDB
Motif
Pfam: PLU-1 JmjC KDM5_C-hel PHD ARID zf-C5HC2 JmjN PHD_5 PHD_2 ASH2L-like_WH
Other DBs
NCBI-GeneID: 100476032
NCBI-ProteinID: XP_002914152
Ensembl: ENSAMEG00000004446
UniProt: G1LCY8
LinkDB
Position
16:3271129..3367012
AA seq 1690 aa
MAGAGPGGYAAEFVPPPECPVFEPSWEEFTDPLSFIGRIRPLAEKTGICKIRPPKDWQPP
FACEVKSFRFTPRVQRLNELEAMTRVRLDFLDQLAKFWELQGSTLKIPVVERKILDLYAL
SKIVASKGGFEMVTKEKKWSKVGSRLGYLPGKGTGSLLKSHYERILYPYELFQSGVSLMG
VQMPNLDLKEKVEPEVLGTDVQTSPEPGTRMNILPKRTRRVKSQSESGEVNRNTELKKLR
IFGAGPKVVGLAMGAKDKEDEVSRRRKVTNRSDAFNMQMRQRKGTLSVNFVDLYVCMFCG
RGNNEDKLLLCDGCDDSYHTFCLIPPLPDVPKGDWRCPKCVAEECNKPREAFGFEQAVRE
YTLQSFGEMADNFKSDYFNMPVHMVPTELVEKEFWRLVSSIEEDVIVEYGADISSKDFGS
GFPVKDGRRKMLPEEEEYALSGWNLNNMPVLEQSVLAHINVDISGMKVPWLYVGMCFSSF
CWHIEDHWSYSINYLHWGEPKTWYGVPSHAAEQLEEVMRELAPELFESQPDLLHQLVTIM
NPNVLMEHGVPVYRTNQCAGEFVVTFPRAYHSGFNQGYNFAEAVNFCTADWLPIGRQCVN
HYRRLRRHCVFSHEELIFKMAADPECLDVGLAAMVCKELTLMTEEETRLRESVVQMGVLM
SEEEVFELVPDDERQCSACRTTCFLSALTCSCNPERLVCLYHPTDLCPCPMQKKCLRYRY
PLEDLPSLLYGVKVRAQSYDTWVSRVTEALSANFNHKKDLIELRVMLEDAEDRKYPENDL
FRKLRDAVKEAETCASVAQLLLSKKQKHRQSPDSGRTRTKLTVEELKAFVQQLFSLPCVI
SQARQVKNLLDDVEEFHERAQEAMMDETPDSSKLQMLIDMGSSLYVELPELARLKQELQQ
ARWLDEVRLTLSDPQQVTLDVMKKLIDSGVGLAPHHAVEKAMAELQELLTVSERWEEKAK
VCLQARPRHSVASLESIVNEAKNIPAFLPNVLSLKEALQKAREWTAKVEAIQSGSNYAYL
EQLESLSAKGRPIPVRLDALPQVESQVAAARAWRERTGRTFLKKNSSHTLLQVLSPRTDI
GIYGSGKNRRKKVKELIEKEKEKDLDLEPLSDLEEGLEETRDTAMVVAVFKEREQKEIEA
MHSLRAANLAKMTMVDRIEEVKFCICRKTASGFMLQCELCKDWFHNSCVPLPKSGSQKKG
SSWQAKEVKFLCPLCMRSRRPRLETILSLLVSLQKLPVRLPEGEALQCLTERAMSWQDRA
RQALATDELSSALAKLSVLSQRMVEQAAREKTEKIISAELQKAAANPDLQGHLPSFQQSA
FNRVVSSVSSSPRQTMDYDDEETDSDEDIRETYGYDMKDTASVKSSSSLEPNLFCDEEIP
IKSEEVVTHMWTAPSFCAEHAYSSASKSCSQGSSTPRKQPRKSPLVPRSLEPPVLELSPG
AKAQLEELMMVGDLLEVSLDETQHIWRILQATHPPSEDRFLHIMEDDSMEEKPLKIKGKD
SSEKKRKRKLEKVEQLFGEGKQKSKELKKMDKPKKKKLKLSAEKSKELNKLAKKLAKEEE
RKKKKEKAAAAKVDLVKETTEKKREKKVLDIPSKYDWSGAEESDDENAVCAAQNCQRPCK
DKVDWVQCDGGCDEWFHQVCVGVSPEMAENEDYICINCAKKQGPDSPGQAPPPSFIMSYK
LPMEDLKETS
NT seq 5073 nt   +upstreamnt  +downstreamnt
atggcaggcgcggggccggggggctatgcggcagagtttgtgccacctcccgagtgccca
gtctttgagcccagctgggaggagttcacggacccgctcagctttatcggccgcatccgg
cctctggcggagaaaaccggcatctgcaaaatccgaccgcccaaggattggcaacctcca
tttgcatgtgaagtaaaaagttttcgtttcactcccagagtccagcgcctgaatgaactt
gaggcaatgaccagagtgagactggacttcttggatcagttagcaaaattttgggaactc
caaggatctactttgaagattccagtggtggagagaaaaatcctggatctgtatgctttg
agcaagattgttgccagcaaaggaggttttgaaatggtcacaaaagagaaaaaatggtct
aaagtgggtagtcgcttgggatatctgccgggaaaaggaactgggtctcttttgaagtca
cattatgaaagaattctctacccatatgaacttttccaatctggtgtcagccttatgggt
gtacagatgcctaatttagatcttaaggaaaaagtagagcctgaggttcttggcactgac
gtccaaacttccccagagccaggcacaagaatgaacattctaccgaagagaacaaggcgt
gtcaagtctcagtcagaatctggagaagtgaacagaaacacggaattgaagaaacttcga
atttttggggctgggcctaaggtcgtgggcctagcaatgggagcaaaagataaagaagat
gaggtctcccgaagacgaaaagttaccaacaggtcagacgcatttaacatgcaaatgaga
caacggaaaggaactctctctgttaactttgttgatctctatgtttgtatgttttgtggt
cggggaaataatgaagataaattgcttttgtgtgatggatgtgatgacagctatcataca
ttttgtttaattcccccactacctgatgtgcccaaaggagactggaggtgtcctaaatgt
gttgctgaggaatgtaataaacctcgagaggcctttggatttgaacaagctgtacgagag
tatacacttcagagctttggagagatggcagataattttaagtctgattatttcaatatg
ccagttcatatggttcctacagaactagtagaaaaggaattctggcggctggtgagcagt
attgaagaagatgttattgtagagtatggagctgatatctcctcaaaagactttggaagt
ggatttcctgtaaaggatggtcggagaaagatgctgccagaagaagaggaatatgcgctt
tctggttggaatttgaataatatgcctgtcttagagcagtctgttcttgcacatattaat
gtagacatctctggtatgaaagtgccatggctctatgtaggaatgtgtttctcttctttc
tgctggcacattgaagatcactggagttattccatcaactacttacactggggggagcca
aagacatggtatggtgtgccatctcatgctgcagaacaactggaggaggtgatgagggag
ctggctcctgagttatttgaatcccagcctgatctcctgcatcagttagtcaccatcatg
aaccccaatgtactgatggaacatggtgtgcctgtgtacaggaccaatcagtgtgctggc
gagtttgttgtgacatttcctcgtgcctatcactctggatttaaccagggctacaacttt
gctgaagctgtgaacttctgtactgctgactggttgcccattggacgtcagtgtgtcaat
cattaccgacggctgaggcgccattgtgtcttttcacatgaagaactcattttcaagatg
gcagcagatccagaatgcttagatgtgggactggctgccatggtatgcaaagaattgact
ctcatgactgaagaagagacaagattaagggagtctgttgtacaaatgggtgtcctcatg
tcagaagaagaagtgtttgaacttgttcctgatgatgagcggcagtgttcagcgtgcaga
accacgtgttttctctctgcactcacgtgctcctgtaatcccgagcgccttgtgtgtctc
taccatccaaccgatctgtgcccctgccccatgcagaagaaatgtcttagataccgctac
ccgctagaggacctcccttctctgctatatggtgtgaaggtcagggcacagtcctatgac
acttgggtcagccgtgttacagaagcattatctgccaacttcaaccacaagaaagatttg
attgaattacgagtaatgctggaagatgctgaggatcggaagtacccagagaatgatctc
tttagaaaactcagagatgctgtgaaagaagctgagacttgtgcttctgtggctcagctg
cttctgagcaaaaagcagaagcacaggcagagcccagatagtgggaggactcggaccaaa
ctgacagtggaagaattgaaggcctttgtccaacagctttttagtcttccatgtgtcatc
agccaagctcgacaagtaaagaatctcctggatgatgtggaagaatttcatgaacgtgcc
caagaggccatgatggatgagaccccagattcttccaaactccagatgttgatagacatg
ggctctagtctctatgtggagctacctgaattagcccgactgaagcaagagctacagcag
gctcgatggttggatgaagtaagactgaccctgtcagatccacaacaggtcactttggat
gtcatgaagaaactgatagactctggggtggggttggcaccccaccatgctgtggagaag
gcaatggctgaactgcaggagctccttacagtctctgagcgatgggaagaaaaggctaag
gtctgcctgcaggcaagaccacggcacagtgtggcaagtttagaaagcatagtgaatgaa
gccaagaacattccagcctttctgcccaatgtgttgtccctgaaagaagcattacaaaag
gctcgagaatggacagctaaagtggaagctattcagagtggcagcaactatgcttatttg
gagcagctggagagcttatctgccaaagggcgacctatccctgtgcgtctggacgcattg
ccccaggtagaatcacaagtagcagctgcacgggcatggagagaacggactgggcggacc
tttcttaagaagaattctagccataccttgttgcaggtgctaagtccccggactgacatt
ggtatatatgggagtggtaaaaacagaaggaaaaaagtaaaagaactaatagaaaaagaa
aaagaaaaagatctggaccttgagcctttgagtgatctggaggaaggattggaggaaacc
agagatacagctatggtggtggcagttttcaaagaacgggagcaaaaagagattgaagcc
atgcattccctcagagcagccaacctagccaagatgacaatggtggaccgcatagaagaa
gtaaaattttgcatttgccgcaagacagccagtgggtttatgctacagtgtgaactctgc
aaagactggttccataacagttgtgttccccttcctaaatcgggttcccaaaaaaaaggg
tctagctggcaagctaaagaagtaaaattcctttgccctctttgtatgcggtctcgaagg
ccaaggttagagactattctctcactcctggtatcccttcagaagttacctgtacgtttg
cctgaaggagaggccctgcagtgtttgacagaacgagctatgagttggcaagatagagca
cggcaggccctagcgacagatgaactgtcctctgccctggccaaactgtctgtgttgagc
cagcgcatggtggagcaggcagctcgagaaaagactgaaaagatcatcagtgcagaactc
caaaaagcagctgctaatccagacttacagggacacttacctagtttccagcagtctgct
tttaaccgagtggtgagcagtgtgtcttcttcccctcgacaaacaatggactatgatgat
gaagaaacagattctgatgaagatatccgggagacatatggctatgacatgaaggacaca
gccagtgtgaagtcctccagtagtctggaacccaatcttttttgtgatgaagaaattccc
atcaagtctgaagaggtggtcactcacatgtggacagcgccttcattctgtgcagaacat
gcttattcttctgcttctaagagttgttctcaaggttctagcaccccaaggaaacaacct
cggaagagccctttggtgccccgaagtttggaaccaccagtgttagagttgtcacctgga
gctaaagcccagctggaagaacttatgatggttggcgatctcctagaagtatctctggat
gagactcagcacatatggcggattttgcaggccacacacccaccctctgaagacagattc
ctgcatatcatggaggatgacagcatggaagagaaaccattaaaaataaaaggaaaagac
tcttcagagaagaaacggaaacggaagctagaaaaagtagaacagctttttggagaagga
aaacagaagtccaaggagttaaaaaaaatggataaacctaaaaagaagaaattaaaacta
agtgcagaaaaatcaaaggagctgaataaactggccaagaaactggcaaaagaagaagag
agaaagaaaaagaaagagaaggctgctgcagccaaagttgaccttgtgaaagagactact
gaaaagaagagagagaaaaaggtgctggacatcccctcaaagtatgactggtccggagca
gaggagtccgatgacgaaaatgctgtgtgtgcagcacagaactgccagcggccctgcaag
gacaaggtagactgggtacaatgtgatggtggctgtgatgagtggtttcatcaagtttgt
gtgggtgtatctccagaaatggctgaaaatgaagattacatctgtataaactgtgcaaag
aagcaagggccagatagcccaggtcaagcaccacctccttccttcataatgagctacaaa
ctaccaatggaggatcttaaggagaccagttag

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