Ailuropoda melanoleuca (giant panda): 100476197
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Entry
100476197 CDS
T01329
Symbol
FREM1
Name
(RefSeq) FRAS1-related extracellular matrix protein 1 isoform X13
KO
K23380
FRAS1-related extracelluar matrix protein 1/2
Organism
aml
Ailuropoda melanoleuca (giant panda)
Pathway
aml04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
aml00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
100476197 (FREM1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04091 Lectins [BR:
aml04091
]
100476197 (FREM1)
Lectins [BR:
aml04091
]
C-Type lectins
Lecticans
100476197 (FREM1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin_3
Frem_N
Cadherin_4
Lectin_C
Big_9
Calx-beta
Motif
Other DBs
NCBI-GeneID:
100476197
NCBI-ProteinID:
XP_002915978
Ensembl:
ENSAMEG00000001889
UniProt:
G1L571
LinkDB
All DBs
Position
7:complement(8269970..8456831)
Genome browser
AA seq
2177 aa
AA seq
DB search
MSSANWGAPSALLLLLLLPGWASPTFLSLNHGLRVMKGSSAFLSGDDLKFAIPKEKDACK
VEVVMNEPMTQRVGKLTPQVFDCHFLPNEVKYIHNGCPILDEDTVKLRLYRFTETDTFME
TFILRVYLLEPDCNIIRRSNNVLEVSEFYGLSRAIDKNLLRFDYERTAGLECTVRLDPVG
SRLPAHGQVVLLEPRPEKPRGDQPHSLFPESQLGTELRCPGGSCALGLKKMGSVNVSCEE
FLLMGLRYQHTDPPSPNIDYISIQLDLTDSRSKIIYKSESAWLPVYIRAGFPNQIPRAAF
MAMFILEVDQFILTSLTTSVLDCEEDETPKPLLVFNITKAPPQGYVTHLWDHTRPVSSFT
WKDLSDMQIAYQPPNSSYPVRRHYEVEVEAYDFFFERSAPITVLISIRTADTNAPRVSWN
TGLSLLEGQSRAITWEQFQIVDNDDIHAVQLVTVGGLQHGRLTLRGGKGFLFTVADLQAG
VVRYHHDDSDSTKDFVIFRIFDGHHSIRHKFPINILPKDDSPPFLISNVVIELEEGQTIL
IQGSMLRASDMDSSDDYIFFNITKPPQAGEIMKKPGPGLIGYAVPGFLQRDLFNSIIYYR
HFGGEIFEDSFEFVLWDSHEPPNLSVPQVVTIHITPVDDQLPKEAPGVSRHLVVKETEVA
YITKKHLHFIDTEYDRELLYTITTPPFFSFGHRHLDAGKLFMVDSIPNLTKNPAASGLRS
FTQHAVNHMKVAYMPPMQDIGIRPGHVQFAFSISNQHGGTLHGICFNITILPVDNQVPEV
FTNPLKVTEGGQCVISTENVLVSDVDTKLDNIYLSLQRLPQCGRVELDGFSLNTGGTFSW
GDLHALKVRYQHDGSERFRDDIFLEVTDGTNSAEFVLHVEVFPVNDEPPILKADLIPMMH
CSEGEEVVITSEYIFATDVDSDDLKLTFVIVREPQHGVVRKAGVAVDQFSQRDVIAGAVT
YRHTGGEIGLLPCFDTITLVVSDGEAGPFVNGCCYNGPHPSVRLHESFPVYDLNITVHPV
DNQSPSIARGTMFAVDEGFSAAITINHLSATDPDTAADDLEFVLVSPPQFGYLENTLPSA
GFEKSNMGISIASFRWKDMKALHINYVQARHLRMEPAADQFTVYATDGTRRSLEIPFYII
INPTNDEAPDFAVQNITVCEGRMKELDTSIISAADLDVPKDPLLFSLTHKPRHGLLISGE
DFPQNKQPVSLGQKHDLVQNFSLEHLKNGMKLMYVHDGSESLADDFTIQLSDGKHKILKT
ISVEITPVNDEKPMLSKKAEITMKMGETRIISSAILSAIDEDSPREKIYYLFERLPQNGQ
LQLKIGRDWVPLYPGMKCTQEEVDLNLLRYTHTGAMDSQDRDSFTFYLWDGDNRSPAFDC
HITIKDMGKGDIVIFGKPLVVSKGDRGFLTTTTLLAVDGTDKPEELLYVITSPPRYGQVE
YVRYPGVPLTSFSQMDVAGQTVCYVHKSKAAVSSDTFRFIISNGLQTKHGVFEIILETVD
RALPMVTRNRGLRLAEGAMGLLSPDLLQLTDPDTPVENLTFVLARLPQYGQLYLRGTVLL
QHNFTQQDVDRRDVAYRHLGGGSQVDYFTFVATDRTNQGFVVDGRMGQEPVSFTIQVDQL
DKTAPYITHLHSASQVGLLKNGCYGIYLTSHVLKASDPDTDDNLIIFKILRGPQHGHLEN
ATTGEFILEKFIQKDLNSKTILYIINSSLEVNSDIMEFQITDPTGNSATPQILELKWSHI
EWSQTEYEVCENVGMLPLEITRRGYSMDSAFVSVKVNQGSATVGKDFTLTPSKLIQFDPG
MSTKMWNIAITYDGLEEDDEAFEVILNSPVNAVLGTKTKAAVKILDSKGGQCHPSYSFNP
NKHNAWEKGIWHPLSPGSSSPTTSGSFHLERRPFPSSKRPAVTRGDTRQGFESPDLSRMK
LRTQGNGKTVLPSSVYRNGTDIIYNYHGMISLKLEEEDGSPSRKRKAKASVISQPQKPSK
AAELPQADKVESTTSSHFPRQDPLPSFPKNCTLELKGLFHFQESLRKLYKCDGITWKAWS
PQTEEAEGIPCPAGWHHHSGYCHSLITERKGTWNTAARACKEHHLGSLVTVLSRQHMRWL
WDISGRKPFWIGLNDQVRAGHWKWIGGEPVTFTNWRKGPPQRLKPGKNCVLAQRQGKWQT
QDCRKGKPHNYVCSRKL
NT seq
6534 nt
NT seq
+upstream
nt +downstream
nt
atgagctctgcgaactggggtgcgcccagtgctttgctgctgctgctgctgctcccaggc
tgggccagccccaccttcctcagccttaaccatgggctcagggtgatgaagggcagctct
gccttcctgtcgggagatgacctgaagtttgccatccccaaagagaaagatgcttgcaaa
gtggaagttgtgatgaacgaaccaatgacccaaagggttgggaaactcactccacaggtc
tttgactgccattttcttcccaatgaagtaaagtatattcacaatggttgcccaattctt
gatgaagacacagtgaagcttagactttacagatttactgagacagataccttcatggaa
acctttatcctgcgggtctatctcctggaaccagactgtaacatcatccgtaggagtaac
aatgtcctggaggtgtctgaattctatgggctatcccgggccattgataagaacctgctc
agatttgattatgagaggacagctggtctggagtgtacggtcaggctggatcctgtggga
agccggttgccagcccacggtcaggtggtcctgctggagcctcggccagaaaaacctcgt
ggagatcagccacacagtttgttccctgagtctcagctgggaacagagctgcgttgtcca
ggtggaagctgtgccctgggactgaagaaaatgggaagtgtcaatgtgagctgtgaggag
ttcctgctaatggggcttcgttatcaacacacagatcccccttctcccaacattgactac
atctccatccagctggatctcacagatagcaggagcaaaatcatatacaagtcagagagc
gcgtggttgcccgtctatatcagagctggctttcctaatcagattccaagggctgcgttc
atggccatgtttatactggaagtggatcagttcatcctgacctccttgactacatccgtt
ctggactgtgaagaggatgagaccccaaagcccttgctggtgttcaacattaccaaagcc
ccgccccagggctacgtgactcatctgtgggatcacactagaccggtctcctcgttcacc
tggaaagatctaagtgacatgcagatagcctatcagccaccaaacagcagctatcctgtg
cggagacattacgaggtagaggtggaggcttatgacttcttcttcgaaaggagtgcacct
atcacagtgctcatctccatcagaacagcggatacgaatgccccacgagtgtcctggaac
acaggtctgagtcttctagaggggcagtctcgggccatcacttgggaacagtttcagatt
gtcgacaatgatgacatccatgctgtccagttggtcaccgtgggcggcctgcagcatgga
cggcttacactaagaggtgggaaaggatttctcttcactgtggctgaccttcaggccgga
gttgttcgctatcatcatgacgacagtgactccaccaaagactttgtgatcttcaggata
tttgatggccatcacagcatccgccataagtttcccatcaacattttgcccaaagatgac
agtcccccgttcctcataagcaatgttgtgattgaactggaggaggggcagacgatactg
atccagggttccatgctgagggcatcagacatggactccagtgatgactacatcttcttt
aatatcacgaaacctcctcaggctggagagatcatgaagaaaccagggccagggctgata
ggctatgctgtccctggcttccttcagagagatctatttaatagcatcatttactatcgt
cactttggtggagagatctttgaagactcttttgaatttgtcttgtgggacagccatgaa
cctccaaatctctcagtgccacaggtggtgaccatccatatcactccagtggatgaccag
cttccaaaagaggctcctggagtttctcggcatttggttgtcaaggaaactgaggtggcc
tacataactaagaaacatctacattttatagatacagaatatgacagggagcttctctac
acgataacaacacctccgtttttctctttcggccatagacatctggatgctgggaaatta
tttatggtggatagcattccaaacctgaccaaaaatcctgcagcctcagggctgagatca
ttcactcagcatgctgtgaaccacatgaaggtggcctacatgccacccatgcaagatata
ggcatccgtccaggacatgtccagtttgccttttccatcagtaaccagcatggtggcact
ttacatggaatctgctttaacatcacaattcttccagtggacaatcaagttcctgaggtg
tttaccaaccccctgaaagtgactgagggaggtcagtgtgtcatcagcacagagaacgtt
ctggtttctgatgtggataccaaactggacaacatctacctctccctacaaagactgcct
cagtgtggaagggtagagctggatggattttctctaaacacaggaggcacattttcttgg
ggagacctccatgctttaaaagttaggtatcagcatgatggatctgagagatttcgggat
gacatattcttggaggtcacagatggcacgaattcagcagaatttgttttacatgttgag
gtattccctgtaaatgatgagccaccaatcctaaaggctgacctcatccccatgatgcat
tgctcagagggcgaagaggtggtcatcacctctgaatacattttcgctactgatgtggac
agtgatgacttgaaactgacgtttgtgattgttcgagagcctcagcatggggtggtgagg
aaagctggagtcgcagtggatcagttctctcagagagatgtcatcgcaggggctgtgaca
tacagacacacgggtggtgagattggcctgctgccttgttttgataccattacgttggtg
gtttcggatggagaagctggcccttttgtgaatggctgttgctacaatgggcctcatcca
tctgttcgtcttcatgagtcctttccagtgtatgacctcaacatcacagtacatccagtg
gacaaccaatcaccttcaatcgcaagaggtaccatgtttgctgtagatgagggtttctct
gcagccattaccattaaccatttgtccgccactgaccctgacactgcagcagatgacttg
gaatttgttttggtttctcctccccagtttggctaccttgaaaacacacttccttctgca
ggttttgaaaaaagcaatatgggcataagcatagcttcgttccggtggaaagacatgaag
gctttgcacattaactatgtgcaggccaggcacctgaggatggaaccggcagctgaccag
ttcacggtgtatgccacagatgggacgcgacgctccttggagataccgttctacattatc
atcaaccccacaaatgacgaagctcctgactttgcagtgcagaatattactgtgtgtgag
ggtcggatgaaagaactggatacttccatcatcagtgctgctgatctggacgttcccaag
gaccccttgctgttcagcctcactcataaaccacgccacggcctcctcatcagcggggaa
gactttcctcagaataagcagccggtcagccttggccagaaacatgaccttgttcagaac
ttctccttggaacatctcaagaatggaatgaagttgatgtatgtgcacgatggctcagag
agccttgctgatgactttacaatccagttgtcagatgggaaacataagatattaaaaacc
atttcagtggagatcaccccagttaatgatgagaaaccaatgctgagcaagaaggctgaa
attacaatgaaaatgggtgaaactcgtattatttctagtgccattctttcagccatagat
gaagactcacccagggagaagatttactatttgtttgaaagacttccccaaaatgggcag
cttcaacttaagatagggagggactgggtccctctctaccctggcatgaaatgcactcaa
gaggaagtggatctaaacttgctgagatacacacacaccggggcgatggattcccaggac
cgagacagctttaccttctacctctgggatggcgacaacagatcaccagcatttgactgt
catatcaccatcaaggatatgggaaaaggtgatattgtcatctttgggaaaccgcttgtg
gtgtctaaaggtgaccgaggtttcttgacgaccaccactctccttgctgtggatggaaca
gacaaacccgaggaactgctctatgtcatcacctcccctccgcggtatggccaggtcgag
tatgtccgctatcctggagtcccgcttacaagtttcagccaaatggacgtagcaggacag
acagtctgctatgtacataagagcaaggcagctgtctccagtgataccttcagattcatc
atcagcaatggcctgcagaccaagcacggggtgtttgagatcatactggagaccgtggac
agagccttacccatggtgaccaggaacagagggctgagactggccgaaggggccatgggc
ctgctctcgcctgacctcctccagctgaccgaccctgacactccagtggagaacctcacc
tttgtgttggcccggctcccacaatacggtcagctttacctgcgggggacagtgctgctt
caacataacttcactcagcaggatgtggaccgcagggatgtggcctacaggcacctggga
gggggctctcaggttgactactttacctttgtggccacggataggacaaaccaaggcttt
gttgtggatgggagaatgggccaagaacctgtttcattcaccatccaggttgaccagttg
gacaaaacagccccctacatcacacacttgcattctgcttcgcaagtggggctcctgaaa
aatggctgttatggaatttacctcacttcccatgtgttgaaggcatccgaccctgacacc
gatgataatctgatcatttttaagattttacgaggcccccagcatggacatctggagaac
gcaacaacaggtgaatttatccttgagaaatttattcaaaaggacttaaacagtaagacc
attctttacatcataaactcatctttggaagtgaattcagatatcatggaatttcaaatc
acggaccccacagggaactctgccactcctcaaattttggagctgaagtggtctcatatt
gaatggtcacagactgaatatgaggtctgcgagaatgtgggcatgttgcccttggaaatt
accagaaggggatattccatggactcagccttcgtgagtgtaaaggtcaaccaagggtca
gctacggttggaaaagacttcactctgactccatctaaactgattcagtttgacccagga
atgtcaactaagatgtggaatatagcaattacctatgacggattagaggaagacgatgag
gcctttgaagtaattctgaactcccctgtgaatgcagttcttggcacaaagacaaaagct
gcagtgaaaattttggactcaaaaggaggacagtgccatccttcatattccttcaacccc
aacaaacacaacgcatgggagaagggcatttggcacccgctgtccccagggtcttcctca
cccaccacttctggttcctttcacctggaaagaagaccctttccatcttcaaagcggccg
gcggtcactaggggagacacccgacagggctttgagtctccagatctttctcgcatgaag
cttaggacccaggggaatggcaaaacggttcttccatcatccgtttatagaaatggaacc
gatatcatctataactatcacggaatgatttccctaaagctggaggaagaggacggttct
ccatctcgcaaaaggaaggccaaagcatctgttattagtcagccacaaaagccaagcaaa
gcggcagaactgcctcaggctgataaggtggaatccacaaccagctcacacttccccaga
caggacccgctgccctcatttccgaagaactgcacactggaattaaagggacttttccac
ttccaagaaagcctccgaaagctgtataagtgtgatgggattacctggaaagcgtggagc
ccccaaactgaggaggcagaaggtattccctgcccagctgggtggcaccatcactcgggc
tactgccactccctgatcacagagcggaaaggcacctggaacacagctgcgcgagcttgc
aaggaacatcacctgggcagccttgtaacggttctctccaggcagcatatgcgatggctc
tgggacatcagtggaagaaagcccttttggataggtttgaatgaccaagtacgtgctggc
cactggaagtggatcggcggggaacctgtcaccttcaccaactggaggaaagggccccct
caacgtttaaagcctggcaagaactgtgttttggctcaaagacaagggaaatggcaaaca
caggactgtaggaagggcaaacctcacaattacgtgtgctccaggaaactctaa
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integrated database retrieval system
