Ailuropoda melanoleuca (giant panda): 100476378
Help
Entry
100476378 CDS
T01329
Symbol
PRPF4
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein Prp4
KO
K12662
U4/U6 small nuclear ribonucleoprotein PRP4
Organism
aml
Ailuropoda melanoleuca (giant panda)
Pathway
aml03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
aml00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
100476378 (PRPF4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
aml03041
]
100476378 (PRPF4)
Spliceosome [BR:
aml03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
100476378 (PRPF4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
WD40
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_CAF1B_HIR1
EIF3I
WDR55
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_2nd
Beta-prop_WDR75_1st
WD40_MABP1-WDR62_2nd
ANAPC4_WD40
PRP4
Beta-prop_EML
WDR90_beta-prop_4th
WD40_MABP1-WDR62_1st
NBCH_WD40
Beta-prop_TEP1_C
Beta-prop_EIPR1
Beta-prop_DCAF4
Beta-prop_SCAP
Beta-prop_IFT122_1st
Beta-prop_Vps41
WD_LRWD1
Beta-prop_IFT140_1st
WD40_like
Ge1_WD40
Beta-prop_WDR19_1st
Beta-prop_WDR35_TULP_N
Beta-prop_WDR11_1st
Motif
Other DBs
NCBI-GeneID:
100476378
NCBI-ProteinID:
XP_002915829
Ensembl:
ENSAMEG00000013048
LinkDB
All DBs
Position
7:40583500..40601378
Genome browser
AA seq
521 aa
AA seq
DB search
MATSRASSTATKTKAPDDLVAPVVKKPHIYYGSLEEKERERLAKGESGILGKEGLKAGIE
AGNINITSGEVFEIEEHISERQAEVLAEFERRKRARQINVSTDDSEVKACLRALGEPITL
FGEGPAERRERLRNILSVVGTDALKKTKKDDEKSKKSKEEYQQTWYHEGPNSLKVARLWI
ANYSLPRAMKRLEEARLHKEIPETTRTSQMQELHKSLRSLNNFCSQIGDDRPISYCHFSP
NSKMLATACWSGLCKLWSVPDCNLLHTLRGHNTNVGAIVFHPKSTVSLDQKDVNLASCAA
DGSVKLWSLDSDEPVADIEGHTVRVARVMWHPSGRFLGTTCYDRSWRLWDLEAQEEILHQ
EGHSMGVYDIAFHQDGSLAGTGGLDAFGRVWDLRTGRCIMFLEGHLKEIYGINFSPNGYH
IATGSGDNTCKVWDLRQRRCVYTIPAHQNLVTGVKFEPIHGNFLLTGAYDNTAKIWTHPG
WSPLKTLAGHEGKVMGLDISSDGQLIATCSYDRTFKLWMAE
NT seq
1566 nt
NT seq
+upstream
nt +downstream
nt
atggctacctcacgagcctcctccacggcaaccaaaactaaggcacctgatgacttagtt
gctcctgttgtgaagaaaccacacatctattatggaagtttagaagagaaggagagggaa
cgtctggccaaaggagagtctgggattttggggaaagaaggacttaaagctggaattgaa
gcaggaaatattaacataacctctggagaggtgtttgaaattgaagagcacatcagtgaa
cgacaggctgaagtattagccgagtttgagagaagaaagcgagcccggcaaatcaatgtt
tccactgatgactctgaggtcaaggcttgccttagagccttgggggagcccatcacactt
tttggagaaggtcctgctgaaagaagagaaaggttaagaaatatcctctcagtggttggt
actgatgccttaaaaaaaaccaaaaaagatgatgagaaatccaaaaagtccaaagaagag
tatcagcaaacctggtaccatgaaggaccaaacagcctgaaggttgctagactgtggatt
gctaattattcgctgcccagggcaatgaaacgcttggaagaggcccgtctccataaagag
attcctgagacaaccaggacctcccagatgcaagagctgcacaaatctctccggtctttg
aataatttctgcagtcagattggggatgatcggcctatctcctactgccactttagtcct
aattccaaaatgctggccacagcttgttggagtgggctttgcaagctctggtctgttccc
gattgcaacctccttcacactctgcgaggccataacacaaatgtaggagcaattgtattc
catccaaaatccactgtctccttggaccaaaaagatgtcaatctggcctcttgtgctgct
gatggttctgtgaagctttggagccttgacagtgatgaaccggtggcggatattgaaggc
catacagtgcgtgtggcccgtgtaatgtggcatccatccgggcgtttcttgggtaccacc
tgctatgaccgctcatggcgcttatgggatttggaggctcaagaggagatcctgcatcag
gaaggccacagcatgggtgtgtatgacattgccttccatcaagatggctctttggctggc
actgggggactggatgcatttggtcgtgtttgggacctgcgcacaggacggtgtatcatg
ttcttagaaggccacctgaaggaaatctatggaataaatttctcccccaatggctaccac
attgcaaccggcagcggtgacaacacgtgcaaagtgtgggaccttcgacaacggcgttgt
gtctataccatccctgcccatcagaacttagtgactggtgtcaagtttgagcctatccat
gggaatttcttgctcactggtgcttatgataacactgccaagatctggacccacccaggc
tggtccccactgaagactctggctggccatgaaggcaaagtgatgggcctagacatttct
tctgatgggcagctcatagccacttgctcatatgacaggaccttcaagctttggatggct
gaatag
DBGET
integrated database retrieval system
