Ailuropoda melanoleuca (giant panda): 100476681
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Entry
100476681 CDS
T01329
Symbol
PRDM13
Name
(RefSeq) PR domain zinc finger protein 13
KO
K24645
PR domain zinc finger protein 13 [EC:2.1.1.-]
Organism
aml
Ailuropoda melanoleuca (giant panda)
Brite
KEGG Orthology (KO) [BR:
aml00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
aml03000
]
100476681 (PRDM13)
Transcription factors [BR:
aml03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
100476681 (PRDM13)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C2H2
PRDM2_PR
zf-H2C2_2
zf-C2H2_4
SET
zf-BED
zf-C2HE
Motif
Other DBs
NCBI-GeneID:
100476681
NCBI-ProteinID:
XP_002929750
Ensembl:
ENSAMEG00000008949
LinkDB
All DBs
Position
10:50599182..50607259
Genome browser
AA seq
716 aa
AA seq
DB search
MHGTARAPATSVSADCCIPAGLRLGPVPGTFKLGKYLSDRREPGPKKKVRMVRGELVDES
GGSPLEWIGLIRAARNPQEQTLEAIADLPGGQIFYRALRDVQPGEELTVWYSNSLAQWFD
IPTIATPTHDEKGEERYICWYCWRTFRYPNSLKAHLRFHCVLSSGGGRAYLHHEHAARQG
AAPAADGLHFSAKPAAPDFAAAAPPGTLRSHPQAPPPLQACGARESIKREATSAPSAASP
PPAKWGQSKKGKEQPDRALDMSGAARGHGHFLGIVGGSPAGGGSLAFYPGVRSAFKPAGL
ARAAAAAHGDPYREEGGGKPGSGLALGRLLGGGRAGGRPGSGENPAAGSTGHHHHHHAHH
HHHHSKCLLAGEPPPPPPPGLPCPGGLRGFPLLPAPPEEASAFKHVERAQPAAAALPGAR
FAQLPSATGLPVERCALPALDAGGLKAYPGGECSHLPAVMPAFTVYNGELLYGSPAAAAY
YPLKLHFGGLLKYPESISYFSGPAAAAAAAAAAALSPAELGSLASIDREIAMHTQQLSEM
AAGKNRGRLDAGTLPPAVVAAGGPGGGGSGGGGAGKPKTGHLCLYCGKLYSRKYGLKIHM
RTHTGYKPLKCKVCLRPFGDPSNLNKHIRLHAEGNTPYRCEFCGKVLVRRRDLERHVKSR
HPGQNLLAKAGEGPGAEADYLPEPGEPKSDNDSDVDVCFTDDQSDPEAGGGGERDS
NT seq
2151 nt
NT seq
+upstream
nt +downstream
nt
atgcacggaacagcccgcgctcccgccaccagcgtgagtgccgactgctgcatcccggcc
ggcctgcgcctcgggccggtgcccggaaccttcaagctgggcaagtacctgtcagaccgc
agggaacccgggcccaagaaaaaggtgcgcatggtgagaggggagctggtggacgagtcg
gggggctctcctctggaatggatagggttaatccgggcagccaggaacccccaggaacag
actctcgaagctattgcagacttacccggaggacagattttctaccgagctctgcgagat
gtccagccaggggaggagctgaccgtgtggtattccaactccttagctcagtggttcgac
atccccacgattgcaactccgacgcacgacgagaaaggggaggagcgctacatttgctgg
tactgctggaggacgtttagataccccaacagccttaaggcccacctacgttttcactgc
gtgctcagcagcggcgggggccgagcctacctgcaccacgagcatgcggctcgccaaggc
gctgccccggccgccgatggccttcacttctctgcgaaacccgcggcgcctgactttgcc
gcagctgccccgcctggcactctgcggtcccacccgcaggctccaccgcccctccaggcc
tgcggagcgcgggagagcattaagcgcgaggccacctctgcgccctccgccgcttcgccg
cccccggccaagtgggggcagtccaagaagggcaaggagcagccggaccgcgccctggac
atgagcggggccgcccggggacacggccacttcctcggcatcgtgggcggctccccagcg
gggggcggcagcctggccttctaccccggagtgcgctcggctttcaagcctgcgggcttg
gccagggcggccgcggccgcgcacggcgacccctaccgggaggagggcggcggcaaaccg
gggtccggcctggccttaggcaggctgctgggtgggggccgggcgggcgggcgcccggga
agcggggagaaccccgcggcgggcagcacgggccaccaccatcaccaccacgcgcaccac
caccatcaccactcaaagtgcttgctcgcgggggaaccgcctccgccgcctccgccgggc
ctaccctgcccggggggcctgcgcggctttcctctgctccctgcccccccggaagaggcg
tcagccttcaagcatgtggagcgcgcccagcccgccgcggctgcgctgccgggagcgcgt
ttcgctcagctgccctctgcgaccgggctgcccgtcgagcgctgcgcgctaccggccctc
gacgcgggtgggctcaaagcctaccccggtggcgagtgcagccacctgcctgccgtcatg
ccggcttttaccgtctacaacggggagctgctctacggctcaccggccgccgccgcttat
tacccgctcaaactgcacttcggcgggctgctcaagtatccagagtccatctcctacttc
agcgggcctgccgcggcggcggcagcggcagcagccgctgctctaagccctgcggagctg
ggttccttggctagtatcgaccgagagatcgccatgcacacgcagcagctgtcggagatg
gcggccgggaaaaaccgcggccgcctggacgcggggacgctgccaccagccgttgtggca
gcgggtggccctgggggtggtggcagcggaggtggcggtgcgggcaagcccaagaccggc
cacttgtgcctctactgcggcaagctgtactcgcgcaagtacgggctcaagattcacatg
cggacgcacacgggctacaagccgctcaagtgcaaagtgtgcctgcggcctttcggcgac
cccagcaatctgaacaagcacatccggctgcacgccgagggcaacaccccctaccgctgc
gagttctgcggcaaggtgctggtgcgccgccgggacctggagcgccacgtcaagtcccgc
caccccggacaaaacctgctcgccaaggcgggcgagggcccaggcgcagaggctgactac
ctcccggagcctggggagcccaagagcgacaacgacagcgatgtggacgtctgcttcacc
gacgaccagagcgaccctgaggctggaggcggcggcgagcgcgactcgtaa
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