Ailuropoda melanoleuca (giant panda): 100476709
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Entry
100476709 CDS
T01329
Symbol
SNX13
Name
(RefSeq) sorting nexin-13 isoform X3
KO
K17925
sorting nexin-13
Organism
aml
Ailuropoda melanoleuca (giant panda)
Brite
KEGG Orthology (KO) [BR:
aml00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
aml04990
]
100476709 (SNX13)
Domain-containing proteins not elsewhere classified [BR:
aml04990
]
Phox homology (PX) domain-containing proteins
Sorting nexins
100476709 (SNX13)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PXA
Nexin_C
PX
RGS
Rep3_C
Motif
Other DBs
NCBI-GeneID:
100476709
NCBI-ProteinID:
XP_011220902
Ensembl:
ENSAMEG00000010639
LinkDB
All DBs
Position
1:complement(156503519..156631123)
Genome browser
AA seq
1174 aa
AA seq
DB search
MLFGRLWAKEMREGSFSTGHLPPFPRDARGPQRHQSKARSRPVSLHPRVSLPRRAAEDER
TPRARVPAPGLTLRWAASPLPSVPSAPGNPALEASPPWPSGPRGVSLHFPTRRRHGDGHE
SPAAPAPTNGSARRRETRTSLFQDGGASVASSRAGGKPAKPSKAAARERTEGAVSAVGGG
SGSFRCCYGCCHAARLGRSSLPRGVIMLTETSLSIWGWGSLGIVLSLITFGPFVIFYLAF
YILCFVGGGFVVTLLFGKTNSEKYLEQCEHSFLPPTSTGIPKCLEEMKREARTIKIDRRL
TGANIIDEPLQQVIQFSLRDYVQYWYYTLSDDESFLLEIRQTLQNALIQFATRSKEIDWQ
PYFTTRIVDDFGTHLRVFRKAQQKITEKDDQAKGTAEDLVDTFFEVEVEMEKDVCRDLVC
TSPKDEEGFLRDLCEVLLYLLLPPGDFQNKIMRYFVREILARGILLPLINQLSDPDYINQ
YIIWMIRDSNCNYEAFMNIIKLSDNIGELEAVRDKAAEELQYLRSLDTVGDDINTIKNQI
NSLLFVKKVCDSRIQRLQSGKEINTVKLAANFGKLCTVPLDSILVDNVALQFFMDYMQQT
GGQAHLFFWMTVEGYRVTAQQQLEVLLSRQKDGKHQTNQTKGLLRAAAVGIYEQYLSEKA
SPRVTVDDYLVAKLADTLNHEDPTPEIFDDIQRKVYELMLRDERFYPSFRQNALYVRMLA
ELDMLKDPSFRGSDDGDGESFNGSPTGSINLSLDDLSNVSSDDSVQLHAYISDTVYADYD
PYAVAGVCNDHGKTYALYAITVHRRSLNSEEMWKTYRRYSDFHDFHMRITEQFENLSSIL
KLPGKKTFNNMDRDFLEKRKKDLNAYLQLLLTPEMMKASPALAHYVYDFLENKAYSKGKG
DFARKMDTFVNPLRNSMRNVSNAVKSLPDSLAEGMTKMSDNMGKMSERLGQDIKQSFFKV
PPLIPKTDSDPEHCRVSAQLDDTVDDNIPLRVMLLLMDEVFDLKERNQWLRRNIKNLLQQ
LIRATYGDTINRKIVDHVDWMTSPEQVADLVKRFRDAFWPNGILAETVPCRDKAIRMRTR
VAGKTKLLSIMPDELKHIIGAETTRKGILRVFEMFQHNQLNRRMVYVFLEGFLETLFPQY
KFRELFNKLHSRSKQIQKYKQKLQTTQAPSLQKR
NT seq
3525 nt
NT seq
+upstream
nt +downstream
nt
atgctcttcggtcgcctctgggcaaaggaaatgcgagagggaagtttctctacaggacat
ctgccgccttttccccgagacgcgcgaggtccgcagcgccatcagtcgaaggctcggtct
cggccggtctcgctccaccccagggtcagcctaccccggcgtgcggcggaggacgagcga
actccgcgggcgcgcgtgccggctcccgggctgaccctgcgctgggccgcgtctccactc
ccgtcagtcccaagtgcgcctgggaacccagctttggaggcctcaccgccgtggccgagt
gggccgcgaggagtcagcctccacttccccacgcgccggcgccatggagacggtcacgag
tcgccggcggctcctgcacccaccaatgggagcgcacgtcgcagagagacgcggacgtcg
ctcttccaagatggcggcgcgtccgtcgcgagcagccgggccggggggaagccagcgaag
ccgagtaaagccgccgcccgggagaggactgaaggagctgtttcggccgttggcggcggc
tcgggcagttttcgctgctgctacggctgttgccatgcggcgaggctagggaggagctca
cttccccggggtgtaataatgttaacagagaccagtctatccatatggggatggggaagc
cttggcattgtcctttctttgataacctttggaccctttgtaatattttatttggccttt
tatatcctctgctttgtgggtgggggttttgtggttactctcctgtttggaaaaacaaac
tcagagaagtacctagaacagtgtgaacattcatttctgcctccaacatcaactgggatt
cctaagtgcttagaagaaatgaaacgagaagccaggactataaagattgatagaagattg
acaggtgccaatataattgatgaacctctccagcaagttatccagttttccttgagggat
tatgtccagtattggtattatacattaagtgatgatgaatcttttcttcttgaaattagg
cagactcttcaaaatgcactcattcagtttgctactaggtcaaaagaaatagactggcaa
ccttattttactacacgcattgtagatgattttggcacacacctacgagtattcagaaag
gctcaacagaagataacagagaaagatgatcaagcaaaaggtacagcagaagatcttgtg
gataccttctttgaagttgaagttgaaatggagaaggacgtttgccgcgatctagtgtgc
acttctcccaaagatgaagaaggattcctaagggatttgtgtgaggtcttattatattta
ttgctacctcctggagatttccagaacaagatcatgcgatactttgtcagggaaatcctt
gcacgaggaattcttcttccattaataaatcaactcagtgatcctgattatattaatcaa
tatatcatatggatgatccgtgattctaattgcaactatgaggcctttatgaacattatt
aaattgagtgacaatattggagagctagaagcagtcagagataaggcggcagaagaatta
cagtatcttcgatctctagatacagttggtgatgatatcaacactatcaagaatcaaata
aacagcttattatttgtaaagaaagtatgtgactcaagaatacagcgattgcagtcaggc
aaagaaataaatactgtgaaactggcagcaaactttgggaaactttgcacagtccccctg
gacagcattcttgtagataacgttgcactacaattttttatggattacatgcagcaaact
ggaggtcaagcacatctcttcttttggatgacggtggaaggctatcgagttacagcccag
cagcaactggaagtcttactaagtcgtcagaaagatggaaaacatcaaaccaaccaaacc
aaaggtcttttaagagcagctgctgttgggatatatgaacagtatttatcagaaaaggca
tctccaagagttactgttgatgattatttggtggcaaaattagcagatactttgaatcat
gaagatccaacccctgaaatcttcgatgacattcaaaggaaggtttatgaattgatgcta
cgagatgaaagattttatccttccttcagacagaatgcactttatgtgcgcatgttagct
gagctggatatgttaaaagatcctagtttcagaggatcagatgatggtgatggagagtct
tttaacgggtctcctactggaagcataaatttgtctttagatgacctttcaaatgtatct
tctgatgattcagtacaacttcatgcttacatttcagacactgtatatgctgactatgac
ccatatgctgtggcaggcgtttgtaatgatcatggcaagacgtacgcattatatgctatc
actgtacaccgacgcagtcttaacagtgaggagatgtggaaaacttatcgtcgttatagt
gacttccatgacttccatatgaggatcactgaacagtttgaaaatttgtcaagcatattg
aagcttcctggtaaaaagacttttaataatatggatagagatttcttagaaaaaagaaaa
aaggatttaaatgcatatctgcagctactgttaactcctgaaatgatgaaagcatcccca
gctttggctcactatgtgtatgatttccttgagaacaaagcctacagtaaagggaaaggg
gattttgctcgcaagatggacacttttgtaaatccacttcgaaattctatgaggaatgtt
tcaaatgcagttaaatcccttcctgatagcttggcagagggaatgactaaaatgtcagac
aacatgggcaaaatgtcagaaagattaggtcaagacataaagcaatcatttttcaaggtg
cctcctttaattccgaagactgactcagatcctgaacattgtcgggtctcagctcaactt
gatgatactgtggatgacaatattccacttagggtaatgctgcttcttatggatgaagta
ttcgacttaaaagagagaaatcagtggttgcgaaggaatatcaaaaacctacttcagcag
cttattagagccacatatggtgatactattaatagaaaaatagttgaccatgttgattgg
atgacctcacctgagcaagtagccgacttagtgaaacgtttcagagatgccttttggcca
aatggcattttagcagagactgttccgtgcagagataaagctattcgaatgagaacaaga
gttgcaggaaaaactaaattactttcaattatgccagatgaactgaagcacattatcggg
gctgagacaacacggaaaggtattcttcgtgtgtttgaaatgtttcagcacaaccagtta
aataggagaatggtttatgtcttcttggaaggctttttggaaaccttatttccacagtat
aaatttcgtgaacttttcaacaaactgcattcacggtcaaagcagatacagaaatataaa
cagaaacttcaaactacgcaagcgccttctttacagaaaaggtga
DBGET
integrated database retrieval system