KEGG   Ailuropoda melanoleuca (giant panda): 100476709
Entry
100476709         CDS       T01329                                 
Symbol
SNX13
Name
(RefSeq) sorting nexin-13 isoform X3
  KO
K17925  sorting nexin-13
Organism
aml  Ailuropoda melanoleuca (giant panda)
Brite
KEGG Orthology (KO) [BR:aml00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04990 Domain-containing proteins not elsewhere classified [BR:aml04990]
    100476709 (SNX13)
Domain-containing proteins not elsewhere classified [BR:aml04990]
 Phox homology (PX) domain-containing proteins
  Sorting nexins
   100476709 (SNX13)
SSDB
Motif
Pfam: PXA Nexin_C PX RGS Rep3_C
Other DBs
NCBI-GeneID: 100476709
NCBI-ProteinID: XP_011220902
Ensembl: ENSAMEG00000010639
LinkDB
Position
1:complement(156503519..156631123)
AA seq 1174 aa
MLFGRLWAKEMREGSFSTGHLPPFPRDARGPQRHQSKARSRPVSLHPRVSLPRRAAEDER
TPRARVPAPGLTLRWAASPLPSVPSAPGNPALEASPPWPSGPRGVSLHFPTRRRHGDGHE
SPAAPAPTNGSARRRETRTSLFQDGGASVASSRAGGKPAKPSKAAARERTEGAVSAVGGG
SGSFRCCYGCCHAARLGRSSLPRGVIMLTETSLSIWGWGSLGIVLSLITFGPFVIFYLAF
YILCFVGGGFVVTLLFGKTNSEKYLEQCEHSFLPPTSTGIPKCLEEMKREARTIKIDRRL
TGANIIDEPLQQVIQFSLRDYVQYWYYTLSDDESFLLEIRQTLQNALIQFATRSKEIDWQ
PYFTTRIVDDFGTHLRVFRKAQQKITEKDDQAKGTAEDLVDTFFEVEVEMEKDVCRDLVC
TSPKDEEGFLRDLCEVLLYLLLPPGDFQNKIMRYFVREILARGILLPLINQLSDPDYINQ
YIIWMIRDSNCNYEAFMNIIKLSDNIGELEAVRDKAAEELQYLRSLDTVGDDINTIKNQI
NSLLFVKKVCDSRIQRLQSGKEINTVKLAANFGKLCTVPLDSILVDNVALQFFMDYMQQT
GGQAHLFFWMTVEGYRVTAQQQLEVLLSRQKDGKHQTNQTKGLLRAAAVGIYEQYLSEKA
SPRVTVDDYLVAKLADTLNHEDPTPEIFDDIQRKVYELMLRDERFYPSFRQNALYVRMLA
ELDMLKDPSFRGSDDGDGESFNGSPTGSINLSLDDLSNVSSDDSVQLHAYISDTVYADYD
PYAVAGVCNDHGKTYALYAITVHRRSLNSEEMWKTYRRYSDFHDFHMRITEQFENLSSIL
KLPGKKTFNNMDRDFLEKRKKDLNAYLQLLLTPEMMKASPALAHYVYDFLENKAYSKGKG
DFARKMDTFVNPLRNSMRNVSNAVKSLPDSLAEGMTKMSDNMGKMSERLGQDIKQSFFKV
PPLIPKTDSDPEHCRVSAQLDDTVDDNIPLRVMLLLMDEVFDLKERNQWLRRNIKNLLQQ
LIRATYGDTINRKIVDHVDWMTSPEQVADLVKRFRDAFWPNGILAETVPCRDKAIRMRTR
VAGKTKLLSIMPDELKHIIGAETTRKGILRVFEMFQHNQLNRRMVYVFLEGFLETLFPQY
KFRELFNKLHSRSKQIQKYKQKLQTTQAPSLQKR
NT seq 3525 nt   +upstreamnt  +downstreamnt
atgctcttcggtcgcctctgggcaaaggaaatgcgagagggaagtttctctacaggacat
ctgccgccttttccccgagacgcgcgaggtccgcagcgccatcagtcgaaggctcggtct
cggccggtctcgctccaccccagggtcagcctaccccggcgtgcggcggaggacgagcga
actccgcgggcgcgcgtgccggctcccgggctgaccctgcgctgggccgcgtctccactc
ccgtcagtcccaagtgcgcctgggaacccagctttggaggcctcaccgccgtggccgagt
gggccgcgaggagtcagcctccacttccccacgcgccggcgccatggagacggtcacgag
tcgccggcggctcctgcacccaccaatgggagcgcacgtcgcagagagacgcggacgtcg
ctcttccaagatggcggcgcgtccgtcgcgagcagccgggccggggggaagccagcgaag
ccgagtaaagccgccgcccgggagaggactgaaggagctgtttcggccgttggcggcggc
tcgggcagttttcgctgctgctacggctgttgccatgcggcgaggctagggaggagctca
cttccccggggtgtaataatgttaacagagaccagtctatccatatggggatggggaagc
cttggcattgtcctttctttgataacctttggaccctttgtaatattttatttggccttt
tatatcctctgctttgtgggtgggggttttgtggttactctcctgtttggaaaaacaaac
tcagagaagtacctagaacagtgtgaacattcatttctgcctccaacatcaactgggatt
cctaagtgcttagaagaaatgaaacgagaagccaggactataaagattgatagaagattg
acaggtgccaatataattgatgaacctctccagcaagttatccagttttccttgagggat
tatgtccagtattggtattatacattaagtgatgatgaatcttttcttcttgaaattagg
cagactcttcaaaatgcactcattcagtttgctactaggtcaaaagaaatagactggcaa
ccttattttactacacgcattgtagatgattttggcacacacctacgagtattcagaaag
gctcaacagaagataacagagaaagatgatcaagcaaaaggtacagcagaagatcttgtg
gataccttctttgaagttgaagttgaaatggagaaggacgtttgccgcgatctagtgtgc
acttctcccaaagatgaagaaggattcctaagggatttgtgtgaggtcttattatattta
ttgctacctcctggagatttccagaacaagatcatgcgatactttgtcagggaaatcctt
gcacgaggaattcttcttccattaataaatcaactcagtgatcctgattatattaatcaa
tatatcatatggatgatccgtgattctaattgcaactatgaggcctttatgaacattatt
aaattgagtgacaatattggagagctagaagcagtcagagataaggcggcagaagaatta
cagtatcttcgatctctagatacagttggtgatgatatcaacactatcaagaatcaaata
aacagcttattatttgtaaagaaagtatgtgactcaagaatacagcgattgcagtcaggc
aaagaaataaatactgtgaaactggcagcaaactttgggaaactttgcacagtccccctg
gacagcattcttgtagataacgttgcactacaattttttatggattacatgcagcaaact
ggaggtcaagcacatctcttcttttggatgacggtggaaggctatcgagttacagcccag
cagcaactggaagtcttactaagtcgtcagaaagatggaaaacatcaaaccaaccaaacc
aaaggtcttttaagagcagctgctgttgggatatatgaacagtatttatcagaaaaggca
tctccaagagttactgttgatgattatttggtggcaaaattagcagatactttgaatcat
gaagatccaacccctgaaatcttcgatgacattcaaaggaaggtttatgaattgatgcta
cgagatgaaagattttatccttccttcagacagaatgcactttatgtgcgcatgttagct
gagctggatatgttaaaagatcctagtttcagaggatcagatgatggtgatggagagtct
tttaacgggtctcctactggaagcataaatttgtctttagatgacctttcaaatgtatct
tctgatgattcagtacaacttcatgcttacatttcagacactgtatatgctgactatgac
ccatatgctgtggcaggcgtttgtaatgatcatggcaagacgtacgcattatatgctatc
actgtacaccgacgcagtcttaacagtgaggagatgtggaaaacttatcgtcgttatagt
gacttccatgacttccatatgaggatcactgaacagtttgaaaatttgtcaagcatattg
aagcttcctggtaaaaagacttttaataatatggatagagatttcttagaaaaaagaaaa
aaggatttaaatgcatatctgcagctactgttaactcctgaaatgatgaaagcatcccca
gctttggctcactatgtgtatgatttccttgagaacaaagcctacagtaaagggaaaggg
gattttgctcgcaagatggacacttttgtaaatccacttcgaaattctatgaggaatgtt
tcaaatgcagttaaatcccttcctgatagcttggcagagggaatgactaaaatgtcagac
aacatgggcaaaatgtcagaaagattaggtcaagacataaagcaatcatttttcaaggtg
cctcctttaattccgaagactgactcagatcctgaacattgtcgggtctcagctcaactt
gatgatactgtggatgacaatattccacttagggtaatgctgcttcttatggatgaagta
ttcgacttaaaagagagaaatcagtggttgcgaaggaatatcaaaaacctacttcagcag
cttattagagccacatatggtgatactattaatagaaaaatagttgaccatgttgattgg
atgacctcacctgagcaagtagccgacttagtgaaacgtttcagagatgccttttggcca
aatggcattttagcagagactgttccgtgcagagataaagctattcgaatgagaacaaga
gttgcaggaaaaactaaattactttcaattatgccagatgaactgaagcacattatcggg
gctgagacaacacggaaaggtattcttcgtgtgtttgaaatgtttcagcacaaccagtta
aataggagaatggtttatgtcttcttggaaggctttttggaaaccttatttccacagtat
aaatttcgtgaacttttcaacaaactgcattcacggtcaaagcagatacagaaatataaa
cagaaacttcaaactacgcaagcgccttctttacagaaaaggtga

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