Ailuropoda melanoleuca (giant panda): 100476722
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Entry
100476722 CDS
T01329
Symbol
VCL
Name
(RefSeq) vinculin isoform X1
KO
K05700
vinculin
Organism
aml
Ailuropoda melanoleuca (giant panda)
Pathway
aml04510
Focal adhesion
aml04520
Adherens junction
aml04670
Leukocyte transendothelial migration
aml04810
Regulation of actin cytoskeleton
aml04820
Cytoskeleton in muscle cells
aml05100
Bacterial invasion of epithelial cells
aml05146
Amoebiasis
Brite
KEGG Orthology (KO) [BR:
aml00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
100476722 (VCL)
04520 Adherens junction
100476722 (VCL)
09142 Cell motility
04820 Cytoskeleton in muscle cells
100476722 (VCL)
04810 Regulation of actin cytoskeleton
100476722 (VCL)
09150 Organismal Systems
09151 Immune system
04670 Leukocyte transendothelial migration
100476722 (VCL)
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
100476722 (VCL)
09174 Infectious disease: parasitic
05146 Amoebiasis
100476722 (VCL)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
aml04812
]
100476722 (VCL)
04147 Exosome [BR:
aml04147
]
100476722 (VCL)
Cytoskeleton proteins [BR:
aml04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
100476722 (VCL)
Exosome [BR:
aml04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
100476722 (VCL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vinculin
VMAP-M0
Motif
Other DBs
NCBI-GeneID:
100476722
NCBI-ProteinID:
XP_002920438
Ensembl:
ENSAMEG00000016649
UniProt:
D2HEE4
LinkDB
All DBs
Position
6:77421272..77527286
Genome browser
AA seq
1134 aa
AA seq
DB search
MPVFHTRTIESILEPVAQQISHLVIMHEEGEVDGKAIPDLTAPVAAVQAAVSNLVRVGKE
TVQTTEDQILKRDMPPAFIKVENACTKLVQAAQMLQSDPYSVPARDYLIDGSRGILSGTS
DLLLTFDEAEVRKIIRVCKGILEYLTVAEVVETMEDLVTYTKNLGPGMTKMAKMIDERQQ
ELTHQEHRVMLVNSMNTVKELLPVLISAMKIFVTTKNSKNQGIEEALKNRNFTVEKMSAE
INEIIRVLQLTSWDEDAWASKDTEAMKRALASIDSKLNQAKGWLRDPSASPGDAGEQAIR
QILDEAGKVGELCAGKERREILGTCKMLGQMTDQVAELRARGQGASPVAMQKAQQVSQGL
DVLTAKVENAARKLEAMTNSKQSIAKKIDAAQNWLADPNGGPEGEEQIRGALAEARKIAE
LCDDPKERDDILRSLGEISALTSKLADLRRQGKGDSPEARALAKQVATALQNLQTKTNRA
VANSRPAKAAVHLEGKIEQAQRWIDNPTVDDRGVGQAAIRGLVAEGHRLANVMMGPYRQD
LLAKCDRVDQLTAQLADLAARGEGESPQARALASQLQDSLKDLKARMQEAMTQEVSDVFS
DTTTPIKLLAVAATAPPDAPGREEVFDERAANFEHHSGRLGATAEKAAAVGTANKSTVEG
IQASVKTARELTPQVVSAARILLRNPGNQAAYEHFETMKNQWIDNVEKMTGLVDEAIDTK
SLLDASEEAIKKDLDKCKVAMANIQPQMLVAGATSIARRANRILLVAKREVENSEDPKFR
EAVKAASDELSKTISPMVMDAKAVAGNISDPGLQKSFLDSGYRILGAVAKVREAFQPQEP
DFPPPPPDLEQLRLADELAPPKPPLPEGEVPPPRPPPPEEKDEEFPEQKAGEVINQPMMM
AARQLHDEARKWSSKPGNRAAEVGIGVVAEADAADAVGFPVPPDMEDDFEPELLLMPSNQ
PVNQPILAAAQSLHREATKWSSKGNDIIAAAKRMALLMAEMSRLVRGGSGTKRALIQCAK
DIAKASDEVTRLAKEVAKQCTDKRIRTNLLQVCERIPTISTQLKILSTVKATMLGRTNIS
DEESEQATEMLVHNAQNLMQSVKETVREAEAASIKIRTDAGFTLRWVRKTPWYQ
NT seq
3405 nt
NT seq
+upstream
nt +downstream
nt
atgccggtgtttcatacgcgcacgatcgagagcatcttggagccggtggcgcagcagatc
tcgcacctggtgatcatgcacgaggaaggcgaggtggacggcaaagccatccctgacctc
accgcgcccgtggccgccgtgcaggcggccgtcagcaaccttgtccgggttggaaaagag
actgttcaaaccactgaggatcagattttgaagagagatatgccaccagcatttattaag
gttgagaatgcttgcaccaagcttgtccaggcagcccagatgcttcagtcggatccttac
tcagtgcctgctcgagattatctaatcgatgggtcaaggggcatcctctccggcacatca
gacctgctcctcaccttcgatgaggctgaggttcgtaaaattattagagtttgcaaagga
attttagaatatcttacagtggcagaggtggtggaaactatggaagatttggtcacctac
acaaagaatcttggaccaggaatgacaaagatggccaagatgattgatgagaggcagcag
gaactgactcaccaggagcaccgagtgatgttggtgaactccatgaacaccgtgaaagag
ttgctgccagttctcatttcagctatgaagatttttgtaacaactaaaaattcaaaaaac
caaggcatagaagaagctttgaaaaaccgcaactttactgtagagaagatgagtgctgaa
attaatgagatcattcgtgtattacaactcacttcttgggatgaagatgcctgggccagc
aaggacactgaagccatgaagagagcattggcctccatagactccaaactgaaccaggcc
aaaggttggcttcgtgatcccagtgcctccccaggggatgctggtgagcaggccatcaga
cagatcttagatgaagctggaaaagttggtgaactctgtgcaggcaaagaacgcagggag
atcctgggaacctgtaaaatgctggggcagatgactgatcaggtggctgaactccgagcc
agaggacaaggggcctcaccggtggccatgcagaaagcccagcaggtgtcacagggtctg
gatgtactcacagcaaaagtggaaaatgcagcccgcaagctggaagctatgaccaactcc
aagcagagcattgccaagaagattgatgctgctcagaattggcttgcagatccaaatggt
ggaccagaaggagaagaacagattcgaggggctttggctgaagctcggaaaatagcagaa
ttatgtgatgatcctaaagagagagatgacattctacgctctcttggggaaatatctgct
ctgacttctaaattagcagatctacggagacagggcaaaggagattccccagaggcccga
gcattggccaaacaggtggccacagccctgcagaacttgcagaccaaaacgaatagagct
gtggccaacagcaggcccgccaaggcagctgtccacctggagggcaagattgagcaggca
cagcggtggattgataatcccacagtggatgaccggggtgttggtcaggctgccatccgg
gggcttgtggccgaagggcatcgtctggccaatgtcatgatggggccgtatcgccaagat
cttcttgcaaagtgtgaccgcgtggaccagctgacggcgcagctggctgaccttgctgcc
agaggggaaggcgagagtcctcaggcgagagcgcttgcctctcagctccaagactcctta
aaggatctgaaagcccggatgcaggaggcgatgactcaggaggtgtcagatgttttcagc
gataccacaactcccatcaagctgttggcagtggcggccactgcacctcctgatgctccc
ggtagggaggaagtatttgacgagagggcagctaactttgagcaccattcgggaaggctt
ggtgccacggcggagaaggcagctgctgttggaactgctaataaatccacggtggaaggc
attcaggcctcagtgaagacggcccgagaactcacaccccaggtcgtttcagctgctcgc
atcttacttaggaatcctggaaatcaagctgcttatgaacattttgagaccatgaagaac
cagtggatcgataatgtcgaaaaaatgacagggctggtggacgaagctattgataccaaa
tctctgttggatgcttctgaggaagcaattaaaaaagacctggacaagtgtaaagtagcc
atggccaacatccagccgcagatgttggtcgccggggcaaccagcatcgcccgtcgggcc
aaccgtatcctgctggtggccaagagggaggtggagaactcggaggatcccaagttccgt
gaggctgtgaaagccgcctctgacgagttgagcaaaaccatctccccaatggtgatggat
gcaaaggctgtggctggaaacatttctgaccctggcctgcaaaagagcttcctggactca
ggatatcggatcttgggagctgtggccaaggtcagagaagccttccaacctcaggagcct
gacttcccgcctcctcctccggatcttgaacagctccgtctggcagatgagcttgctcct
cccaaaccacctctgcccgagggtgaggtccctccgcccaggcccccaccgccagaggag
aaggatgaagagttccccgagcagaaagccggggaggtgattaaccagccgatgatgatg
gctgccaggcagctccatgatgaagctcgcaaatggtccagcaagccgggtaaccgagcc
gctgaggtgggtataggtgttgtagctgaggcagatgcggccgatgctgttgggttccct
gtcccccctgacatggaagacgatttcgaacctgagctgctgttaatgccatccaatcag
ccggtcaaccagcccattctggccgcggctcagtccttgcatcgggaagctaccaagtgg
tctagtaagggcaatgacatcattgcagcagccaagcgcatggctctgctgatggctgag
atgtctcggctggtaagagggggcagtggtaccaagcgggcactgattcagtgtgccaag
gacattgccaaggcctcagacgaggtgacgcggttggccaaggaggttgccaagcagtgc
acagataagcggattagaaccaacctcttacaggtatgtgagcgaatcccgaccataagc
acccagctcaagatcctgtccacggtgaaggccaccatgctgggccggaccaacatcagt
gacgaggagtctgagcaggccacagagatgctggttcacaatgcgcagaacctcatgcag
tctgtgaaggagactgtccgagaagcagaagctgcttcaatcaaaattcgaacagatgct
ggatttacactgcgctgggttagaaagactccctggtaccagtag
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