Ailuropoda melanoleuca (giant panda): 100476751
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Entry
100476751 CDS
T01329
Symbol
SOX17
Name
(RefSeq) transcription factor SOX-17
KO
K04495
transcription factor SOX17 (SOX group F)
Organism
aml
Ailuropoda melanoleuca (giant panda)
Pathway
aml04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
aml00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
100476751 (SOX17)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
aml03000
]
100476751 (SOX17)
Transcription factors [BR:
aml03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
100476751 (SOX17)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HMG_box
Sox17_18_mid
HMG_box_2
HTH_24
Motif
Other DBs
NCBI-GeneID:
100476751
NCBI-ProteinID:
XP_002925690
Ensembl:
ENSAMEG00000025308
LinkDB
All DBs
Position
Unknown
AA seq
406 aa
AA seq
DB search
MSSPDAGYASDDQSQTRSALPAVMAGLGPCPWAESLSPLGDMKVKGEAAASSGAPAGAAG
RAKGESRIRRPMNAFMVWAKDERKRLAQQNPDLHNAELSKMLGKSWKALTLAEKRPFVEE
AERLRVQHMQDHPNYKYRPRRRKQVKRLKRVEGGFLHGLAEPQAATLGPEGGRVAIDGLG
LPFPEQGFPAGPPLLPPHMGGHYRDCQGLGAPPLDGYPLPTPDTSPLDGVEPDPAFFAAP
LPGDCPAAGPYSYPQASDYAGPPEPPVGPMHSRLGLEQACPAMPGHVAPSSALQLYYNAI
SAPAAGGGRGFSMQPQQHQPGPGQPSPPPEALPCRDGADPNQPAELLGEVDRTEFEQYLH
FVCKPEMGLPYQGHDSSVNLPDSHGAISSVVSDASSAVYYCNYPDV
NT seq
1221 nt
NT seq
+upstream
nt +downstream
nt
atgagcagcccggatgcggggtacgccagtgacgaccagagccagacccgcagcgcgctg
cccgcggtgatggctgggctgggcccctgcccctgggccgagtcgctgagccccctcggg
gacatgaaggtgaagggcgaggcggcggcgagcagtggggcgccggctggggcggcgggc
cgagccaagggcgagtctcgcatccggcggccgatgaacgccttcatggtgtgggctaag
gacgaacgcaagcgcctggcgcaacagaacccggacctgcacaacgccgagttgagcaag
atgctgggcaagtcgtggaaagcgctgaccctggcggagaagcggcccttcgtggaggag
gctgagcggctgcgcgtgcagcacatgcaggaccaccccaactacaagtaccggccgcgg
aggcgcaagcaggtgaagcgactgaagcgggtggagggcggcttcctgcacggcctcgcc
gagcctcaggccgccacgctgggccccgagggcggccgcgtggccatcgacggcctgggc
ctgcccttccccgagcagggcttcccggcgggcccgccgttgctgcctcctcacatgggc
ggccactaccgcgactgccagggactgggcgcacccccgctggacggctacccgctgccc
acgccggacacgtccccgctggacggcgtggagccggatcccgccttcttcgccgcgccg
ctgcccggggactgtcccgcggccgggccctacagctacccgcaggcctcggactacgca
gggcccccggagccgcccgtcggccccatgcactcccggctcggcctggagcaggcgtgc
cctgcaatgccgggccacgtggcgccctccagcgccctccagctgtactacaacgcgatt
agcgcgccggcggcgggcggcgggcgcggcttctccatgcagccccagcagcaccagccc
ggcccggggcagccgtcgccccctcccgaggccctgccctgccgggacggggcggaccca
aaccagcccgcggagctcctcggggaggtggaccgcacggaatttgaacagtatctacac
ttcgtgtgcaagcccgagatgggtctcccttaccagggacatgactctagtgtgaatctc
ccagacagccacggggccatttcctcggtggtgtccgatgccagctctgcggtatattac
tgcaactatcctgacgtttga
DBGET
integrated database retrieval system