KEGG   Ailuropoda melanoleuca (giant panda): 100476851
Entry
100476851         CDS       T01329                                 
Name
(RefSeq) high mobility group protein B1-like
  KO
K10802  high mobility group protein B1
Organism
aml  Ailuropoda melanoleuca (giant panda)
Pathway
aml03410  Base excision repair
aml04140  Autophagy - animal
aml04217  Necroptosis
aml04613  Neutrophil extracellular trap formation
Brite
KEGG Orthology (KO) [BR:aml00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    100476851
 09140 Cellular Processes
  09141 Transport and catabolism
   04140 Autophagy - animal
    100476851
  09143 Cell growth and death
   04217 Necroptosis
    100476851
 09150 Organismal Systems
  09151 Immune system
   04613 Neutrophil extracellular trap formation
    100476851
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:aml03036]
    100476851
   03400 DNA repair and recombination proteins [BR:aml03400]
    100476851
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:aml04147]
    100476851
Chromosome and associated proteins [BR:aml03036]
 Eukaryotic type
  Nucleosome assembly factors
   HMG (high mobility group) proteins
    100476851
DNA repair and recombination proteins [BR:aml03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Other BER factors
     100476851
   MMR (mismatch excision repair)
    Other MMR factors
     100476851
Exosome [BR:aml04147]
 Exosomal proteins
  Exosomal proteins of colorectal cancer cells
   100476851
SSDB
Motif
Pfam: HMG_box_2 HMG_box DUF4653 RNA_pol_Rpb1_7
Other DBs
NCBI-GeneID: 100476851
NCBI-ProteinID: XP_034505797
LinkDB
Position
X:complement(18713209..18713933)
AA seq 228 aa
MGKGDPKKLRGKMSSYAFFVQTCQEEHKKKQPDASVNFSEFSKKCSEMWKTMSAKDKGKF
EDTAKADKAHNEREMKTYIPSKGETKKEFQGSQCTLCAHFSSTYTSVPKSPPSAFFLFCS
EYRPKIKGEHPSLLINDVATKLGEMWDKTASDNKQLHGKKAAKLQEKWEKDIAAYRAKGK
PDAAKKGVIKAEKSKQKKQEEEDKEDEEDEKKMKMINKLVLVPFFPCL
NT seq 687 nt   +upstreamnt  +downstreamnt
atgggcaaaggagatcctaagaagctgagaggcaaaatgtcatcatatgcattctttgtg
caaacttgtcaagaggagcacaagaagaaacagccagatgcttcagtcaacttctctgag
ttttctaagaagtgctcagagatgtggaagaccatgtctgctaaagacaaaggaaaattt
gaagatacggcaaaggcggacaaggcccataatgaaagagaaatgaaaacttatattccc
tctaaaggggaaacaaaaaaagaattccaaggatcccaatgcacactttgtgctcacttc
agcagcacatataccagtgtacctaagagtcctccttcggcctttttcttgttttgttct
gagtatcgcccaaaaatcaaaggagaacatcccagcctgttaattaatgatgttgcaacg
aaactgggagagatgtgggataaaactgcttcagataacaagcagctgcatggaaagaag
gctgctaagctgcaggaaaagtgggaaaaggatattgctgcgtaccgagctaaaggaaaa
cctgatgcagcaaaaaagggagtcatcaaggctgaaaaaagcaagcaaaagaagcaagag
gaggaagacaaggaagatgaagaggatgagaagaagatgaagatgattaataagttggtt
ctggtgcctttttttccttgtctgtaa

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