Ailuropoda melanoleuca (giant panda): 100476939
Help
Entry
100476939 CDS
T01329
Symbol
EBF1
Name
(RefSeq) transcription factor COE1 isoform X4
KO
K09103
early B-cell factor
Organism
aml
Ailuropoda melanoleuca (giant panda)
Brite
KEGG Orthology (KO) [BR:
aml00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
aml03000
]
100476939 (EBF1)
Transcription factors [BR:
aml03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
HLH domain only
100476939 (EBF1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
COE1_DBD
COE1_HLH
TIG
HLH
Motif
Other DBs
NCBI-GeneID:
100476939
NCBI-ProteinID:
XP_002912551
Ensembl:
ENSAMEG00000006442
LinkDB
All DBs
Position
3:98476040..98867660
Genome browser
AA seq
642 aa
AA seq
DB search
MSVSLGKQTRPPLQHWGSERGFRGRRNVPFPLPLARESFEQGGGTDGFPVEAWPAALTRS
PRAEESIQRSGSSMKEEPLGSGMNAVRTWMQGAGVLDANTAAQSGVGLARAHFEKQPPSN
LRKSNFFHFVLALYDRQGQPVEIERTAFVGFVEKEKEANSEKTNNGIHYRLQLLYSNGIR
TEQDFYVRLIDSMTKQAIVYEGQDKNPEMCRVLLTHEIMCSRCCDKKSCGNRNETPSDPV
IIDRFFLKFFLKCNQNCLKNAGNPRDMRRFQVVVSTTVNVDGHVLAVSDNMFVHNNSKHG
RRARRLDPSEATPCIKAISPSEGWTTGGATVIIIGDNFFDGLQVIFGTMLVWSELITPHA
IRVQTPPRHIPGVVEVTLSYKSKQFCKGTPGRFIYTALNEPTIDYGFQRLQKVIPRHPGD
PERLPKEVILKRAADLVEALYGMPHNNQEIILKRAADIAEALYSVPRNHSQLPALTNTSV
HAGMMGVNSFSGQLAVNVSEASQATNQGFTRNSSSVSPHGYVPSTTPQQTNYNSVSTSMN
GYGTAAMSNLGGSPTFLNGSAANSPYAIVPSSPTMASSTSLPSNCSSSSGIFSFSPANMV
SAVKQKSAFAPVVRPQTSPPPTCTSTNGNSLQAISGMIVPPM
NT seq
1929 nt
NT seq
+upstream
nt +downstream
nt
atgtcagtcagcctgggcaagcaaacccggccgcctctgcagcactgggggtctgaaaga
ggcttcaggggccgaaggaatgtccccttccctctaccgcttgccagagaaagcttcgag
caaggaggtgggacagacggatttccggtggaagcgtggcctgctgctcttacacgttct
ccgagggcagaggaaagcatccaacggagtggaagcagcatgaaggaagagccgctgggc
agcggcatgaacgcggtgcggacgtggatgcagggcgccggggtgctggacgccaacacg
gcggcgcagagcggggtgggtctggcccgggctcactttgagaagcagccgccttccaat
ctgcggaagtccaacttcttccacttcgtcctggccctctacgacagacagggccagccc
gtggagatcgagaggacagcctttgtggggttcgtggagaaggaaaaagaagccaacagc
gaaaagaccaataacgggattcactaccggctccagctcctctacagcaatgggataagg
acggagcaagatttctacgtgcgcctcattgactccatgacaaaacaagccatagtgtat
gaaggccaagacaagaacccagaaatgtgccgagtcttgctcacacacgagatcatgtgc
agccgctgttgtgacaagaagagctgtggcaaccgaaatgagactccctcagatccagtg
ataattgacaggttcttcttgaaatttttcctcaaatgtaaccaaaattgcctaaagaat
gcaggaaacccacgtgacatgcggagattccaggtcgtggtgtctacgacagtcaatgtg
gatggccatgtcctggcagtctctgataacatgtttgtccataataactctaagcatggg
cggagggctcggaggcttgacccctcggaagctactccctgtatcaaagccatcagcccg
agtgaaggatggacgacgggaggcgcgactgtgatcatcataggggacaatttctttgat
gggttacaggtcatattcggtaccatgctggtctggagtgagctgattactcctcatgcc
atccgtgtgcagacccctcctcggcacatccctggtgttgtagaagtgacattgtcctac
aaatcgaagcagttctgcaaagggacaccgggaagattcatttacacagcgctcaatgaa
cccaccatcgattatggtttccagaggttacagaaggtcattcctcggcaccctggtgac
cctgagcgtttgccaaaggaagtcatcctcaaaagggccgcggatctggtggaagcgctg
tatgggatgccacacaacaaccaggaaattatcctgaagagagccgctgacatcgcagag
gccctgtacagcgtcccccgcaaccacagccagctcccggccctcacgaacacctcggtc
cacgcgggcatgatgggcgtgaactccttcagtggacagctggctgtcaatgtctccgag
gcgtcgcaggccaccaaccagggtttcacccgcaactcaagcagcgtgtcgccacacggc
tacgtgccgagcaccaccccgcagcagaccaattacaactccgtgagcacgagcatgaac
ggctacggcacggccgccatgtccaatctgggcggctccccaaccttcctcaacggctca
gcggccaactcgccctacgccatcgtgccatccagccccaccatggcctcctccacaagc
ctcccctccaactgcagcagctcctcgggcatcttctccttctcaccagccaacatggtc
tcagccgtgaaacagaagagtgcttttgcgccagtcgtcagaccccagacctccccgcct
cccacctgcaccagcaccaatgggaacagcctgcaagcgatatctggcatgattgttcct
cccatgtga
DBGET
integrated database retrieval system
