KEGG   Ailuropoda melanoleuca (giant panda): 100476981
Entry
100476981         CDS       T01329                                 
Symbol
POLR2E
Name
(RefSeq) DNA-directed RNA polymerases I, II, and III subunit RPABC1
  KO
K03013  DNA-directed RNA polymerases I, II, and III subunit RPABC1
Organism
aml  Ailuropoda melanoleuca (giant panda)
Pathway
aml03020  RNA polymerase
aml03420  Nucleotide excision repair
aml04623  Cytosolic DNA-sensing pathway
aml05016  Huntington disease
Brite
KEGG Orthology (KO) [BR:aml00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    100476981 (POLR2E)
  09124 Replication and repair
   03420 Nucleotide excision repair
    100476981 (POLR2E)
 09160 Human Diseases
  09164 Neurodegenerative disease
   05016 Huntington disease
    100476981 (POLR2E)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:aml03021]
    100476981 (POLR2E)
   03400 DNA repair and recombination proteins [BR:aml03400]
    100476981 (POLR2E)
Transcription machinery [BR:aml03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol I, II, III common subunits
     100476981 (POLR2E)
  RNA polymerase III system
   RNA polymerase III
     100476981 (POLR2E)
  RNA polymerase I system
   RNA polymerase I
     100476981 (POLR2E)
DNA repair and recombination proteins [BR:aml03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      100476981 (POLR2E)
SSDB
Motif
Pfam: RNA_pol_Rpb5_N RNA_pol_Rpb5_C NA-iREase1
Other DBs
NCBI-GeneID: 100476981
NCBI-ProteinID: XP_019659646
Ensembl: ENSAMEG00000003159
UniProt: G1L8X2
LinkDB
Position
4:complement(536672..542138)
AA seq 210 aa
MDDEEETYRLWKIRKTIMQLCHDRGYLVTQDELDQTLEEFKAQFGDKPSEGRPRRTDLTV
LVAHNDDPTDQMFVFFPEEPKVGIKTIKVYCQRMQEENITRALIVVQQGMTPSAKQSLVD
MAPKYILEQFLQQELLINITEHELVPEHVVMTKEEVTELLARYKLRENQLPRIQAGDPVA
RYFGIKRGQVVKIIRPSETAGRYITYRLVQ
NT seq 633 nt   +upstreamnt  +downstreamnt
atggacgacgaggaggagacgtaccggctgtggaagatccgcaagaccatcatgcagctg
tgccatgaccgtggctacctggtgacccaggatgagctggaccagacactggaagagttc
aaggcccagtttggggacaagccgagtgaggggcggccacggcgcacagacctcacagtg
ctggtggcccacaacgatgaccccactgaccagatgttcgtcttcttcccagaggagccg
aaagtgggaatcaagaccatcaaggtgtactgccagcggatgcaggaggagaacatcacc
cgggccctcatcgtggtgcagcagggcatgaccccctccgccaagcagtctctggtcgac
atggcccccaagtacatcctggagcagtttctgcagcaagagctactcattaacatcacg
gagcacgagctggtcccagagcacgtcgtcatgaccaaggaggaggtgacagagctgctg
gcccggtataaactgcgagagaaccagctgcccaggatccaggccggagacccggtggca
cgctactttgggataaagcgagggcaggtggtaaagatcatccggcccagcgagactgcg
ggcaggtacatcacctaccggctggtgcagtag

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