KEGG   Ailuropoda melanoleuca (giant panda): 100477160
Entry
100477160         CDS       T01329                                 
Symbol
SAP18
Name
(RefSeq) histone deacetylase complex subunit SAP18 isoform X3
  KO
K14324  histone deacetylase complex subunit SAP18
Organism
aml  Ailuropoda melanoleuca (giant panda)
Pathway
aml03013  Nucleocytoplasmic transport
aml03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:aml00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    100477160 (SAP18)
   03015 mRNA surveillance pathway
    100477160 (SAP18)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:aml03019]
    100477160 (SAP18)
   03036 Chromosome and associated proteins [BR:aml03036]
    100477160 (SAP18)
Messenger RNA biogenesis [BR:aml03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     100477160 (SAP18)
Chromosome and associated proteins [BR:aml03036]
 Eukaryotic type
  Histone modification proteins
   HDAC complexes
    Sin3A-HDAC complex
     100477160 (SAP18)
SSDB
Motif
Pfam: SAP18
Other DBs
NCBI-GeneID: 100477160
NCBI-ProteinID: XP_002925313
Ensembl: ENSAMEG00000014647
UniProt: G1M7X4
LinkDB
Position
7:62905874..62915001
AA seq 172 aa
MLAAGVGGQSERLAGHRRKMAVESRVTQEEIKKEPEKPIDREKTCPLLLRVFTTNNGRHH
RMDEFSRGNVPSSELQIYTWMDATLKELTSLVKEVYPEARKKGTHFNFAIVFTDPKRPGY
RVKEIGSTMSGRKGTDDSMTLQSQKFQIGDYLDIAITPPNRAPPTSGRMRPY
NT seq 519 nt   +upstreamnt  +downstreamnt
atgcttgctgcaggggtcggaggtcagagcgagcgtcttgcgggccataggaggaagatg
gcggtggagtcgcgcgttacccaggaggaaattaagaaggaaccggagaaaccgatcgat
cgggagaaaacgtgcccactgctgctgcgtgttttcaccaccaataacggccgccaccac
cgaatggacgagttttcccgcggaaacgtaccgtccagcgagctgcagatctacacttgg
atggatgcaactttgaaagaactgactagtttagtaaaagaagtctacccagaagctaga
aaaaagggcacacacttcaattttgcaattgtttttacagatcctaaaaggcctggctat
cgagtaaaggagattggcagcaccatgtctgggaggaaggggactgatgactccatgacc
ctgcagtcgcagaagttccaaataggagactatctggacatagcaatcacacctccaaat
cgggcaccacctacttcagggcgcatgagaccatattaa

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