KEGG   Ailuropoda melanoleuca (giant panda): 100477327
Entry
100477327         CDS       T01329                                 
Symbol
EIF4A3
Name
(RefSeq) eukaryotic initiation factor 4A-III
  KO
K13025  ATP-dependent RNA helicase [EC:5.6.2.7]
Organism
aml  Ailuropoda melanoleuca (giant panda)
Pathway
aml03013  Nucleocytoplasmic transport
aml03015  mRNA surveillance pathway
aml03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:aml00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    100477327 (EIF4A3)
  09122 Translation
   03013 Nucleocytoplasmic transport
    100477327 (EIF4A3)
   03015 mRNA surveillance pathway
    100477327 (EIF4A3)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:aml03019]
    100477327 (EIF4A3)
   03041 Spliceosome [BR:aml03041]
    100477327 (EIF4A3)
   03009 Ribosome biogenesis [BR:aml03009]
    100477327 (EIF4A3)
   03012 Translation factors [BR:aml03012]
    100477327 (EIF4A3)
Enzymes [BR:aml01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     100477327 (EIF4A3)
Messenger RNA biogenesis [BR:aml03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     100477327 (EIF4A3)
   mRNA cycle factors
    Stress granule specific factors
     100477327 (EIF4A3)
Spliceosome [BR:aml03041]
 Complex C
  Other components
   EJC/TREX
    100477327 (EIF4A3)
Ribosome biogenesis [BR:aml03009]
 Eukaryotic type
  90S particles
   Helicases
    100477327 (EIF4A3)
Translation factors [BR:aml03012]
 Eukaryotic type
  Initiation factors
   eIF-4
    100477327 (EIF4A3)
SSDB
Motif
Pfam: DEAD Helicase_C ResIII AAA_19 Cas3-like_C_2 AAA_30 AAA_22 Flavi_DEAD
Other DBs
NCBI-GeneID: 100477327
NCBI-ProteinID: XP_034495987
Ensembl: ENSAMEG00000015194
UniProt: G1M9J0
LinkDB
Position
13:complement(43299291..43310750)
AA seq 411 aa
MAATATMATSGSARKRLLKEEDMTKVEFETSEEVDVTPTFDTMGLREDLLRGIYAYGFEK
PSAIQQRAIKQIIKGRDVIAQSQSGTGKTATFSISVLQCLDIQVRETQALILAPTRELAV
QIQKGLLALGDYMNVQCHACIGGTNVGEDIRKLDYGQHVVAGTPGRVFDMIRRRSLRTRA
IKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQVVLISATLPHEILEMTNKFMTDPIRIL
VKRDELTLEGIKQFFVAVEREEWKFDTLCDLYDTLTITQAVIFCNTKRKVDWLTEKMREA
NFTVSSMHGDMPQKERESIMKEFRSGASRVLISTDVWARGLDVPQVSLIINYDLPNNREL
YIHRIGRSGRYGRKGVAINFVKNDDIRILRDIEQYYSTQIDEMPMNVADLI
NT seq 1236 nt   +upstreamnt  +downstreamnt
atggcggccacggccacgatggcgacttcgggctcggcgcggaagcgactcctcaaagag
gaagacatgaccaaagtggaattcgagaccagcgaggaggtggacgtgacgcccacgttc
gacaccatgggcctgcgggaggacctactgcgcggcatctacgcctacggttttgagaaa
ccgtcagccatacagcagcgagccatcaagcagatcattaaagggagagacgtcattgct
caatcgcagtctggcacgggcaaaactgccaccttcagcatttctgtcctccagtgtttg
gatatccaggttcgtgaaacccaggctttgatcttggctccgacaagagagttagccgtg
cagatccagaagggcctgctcgctctgggggactacatgaacgtccagtgccatgcctgc
atcgggggcaccaacgtgggggaggacatcaggaagctggactatgggcagcacgttgtg
gctggcacacccgggcgtgtctttgacatgatccggcgcaggagtttgaggacacgtgcc
atcaagatgctggtgttggatgaggcagatgagatgttgaataaaggtttcaaagagcag
atttacgacgtgtacaggtacctgcccccagccacgcaggtggtgctcatcagcgccacg
ctgcctcacgaaatcctggagatgaccaacaagttcatgacggaccccatccgcatcctg
gtgaagcgtgatgaattgactctagaaggcatcaagcagttctttgtggcggtggagagg
gaagagtggaaatttgacacactgtgtgacctctatgacacgctgaccatcactcaggcg
gtcatcttctgtaacaccaaaaggaaggtcgactggctgacagagaagatgagagaagcc
aacttcacggtctcgtccatgcacggggacatgccgcagaaggagcgcgagtccatcatg
aaggagttccggtccggcgccagccgggtgctcatctccacagacgtgtgggccaggggg
ctggatgtcccgcaggtgtccctcatcattaactacgacctgcccaataacagagagttg
tacatacacagaatcgggcggtcaggccgctacggccgcaagggggtggccatcaacttt
gtgaagaatgacgacatccgcatcctgagggacattgagcagtactactccacccagatc
gacgagatgcccatgaacgtggctgatctgatctga

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