Ailuropoda melanoleuca (giant panda): 100477344
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Entry
100477344 CDS
T01329
Symbol
SIN3A
Name
(RefSeq) paired amphipathic helix protein Sin3a
KO
K11644
paired amphipathic helix protein Sin3a
Organism
aml
Ailuropoda melanoleuca (giant panda)
Pathway
aml04350
TGF-beta signaling pathway
aml04919
Thyroid hormone signaling pathway
aml05016
Huntington disease
aml05169
Epstein-Barr virus infection
aml05202
Transcriptional misregulation in cancer
Brite
KEGG Orthology (KO) [BR:
aml00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
100477344 (SIN3A)
09150 Organismal Systems
09152 Endocrine system
04919 Thyroid hormone signaling pathway
100477344 (SIN3A)
09160 Human Diseases
09161 Cancer: overview
05202 Transcriptional misregulation in cancer
100477344 (SIN3A)
09172 Infectious disease: viral
05169 Epstein-Barr virus infection
100477344 (SIN3A)
09164 Neurodegenerative disease
05016 Huntington disease
100477344 (SIN3A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
aml03036
]
100477344 (SIN3A)
Chromosome and associated proteins [BR:
aml03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
Sin3A-HDAC complex
100477344 (SIN3A)
REST complex
100477344 (SIN3A)
Heterochromatin formation proteins
Other heterochromatin formation proteins
100477344 (SIN3A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sin3a_C
PAH
Sin3_corepress
Motif
Other DBs
NCBI-GeneID:
100477344
NCBI-ProteinID:
XP_002925175
Ensembl:
ENSAMEG00000008231
UniProt:
D2HRJ6
LinkDB
All DBs
Position
9:29185881..29254015
Genome browser
AA seq
1274 aa
AA seq
DB search
MKRRLDDQESPVYAAQQRRIPGSTEAFPHQHRVLAPAPPVYEAVSETMQSATGIQYSVTP
SYQVSAVPQSSGSHGPTIAAVHSSHHHPAAVQPHGGQVVQSHAHPTPPVAPVQGQQQFQR
LKVEDALSYLDQVKLQFGSQPQVYNDFLDIMKEFKSQSIDTPGVISRVSQLFKGHPDLIM
GFNTFLPPGYKIEVQTNDMVNVTTPGQVHQIPTHGIQPQPQPPPQHPSQPSAQSAPAPAQ
PAPQPPPAKVSKPSQLQAHTPASQQTPPLPPYASPRSPPVQPHTPVTISLGTAPSLQNNQ
PVEFNHAINYVNKIKNRFQGQPDIYKAFLEILHTYQKEQRNAKEAGGNYTPALTEQEVYA
QVARLFKNQEDLLSEFGQFLPDANSSVLLSKTTAEKVDSVRNDHGGTVKKPQLNNKPQRP
NQNGCQIRRHSGTGTTPPVKKKPKLLSLKDSSMADASKHGVGTESLFFDKVRKALRSAEA
YENFLRCLVIFNQEVISRAELVQLVSPFLGKFPELFNWFKNFLGYKESVHLETFPKERAT
EGIAMEIDYASCKRLGSSYRALPKSYQQPKCTGRTPLCKEVLNDTWVSFPSWSEDSTFVS
SKKTQYEEHIYRCEDERFELDVVLETNLATIRVLEAIQKKLSRLSAEEQAKFRLDNTLGG
TSEVIHRKALQRIYADKAADIIDGLRKNPSIAVPIVLKRLKMKEEEWREAQRGFNKVWRE
QNEKYYLKSLDHQGINFKQNDTKVLRSKSLLNEIESIYDERQEQATEDNAGVPVGPHLSL
AYEDKQILEDAAALIIHHVKRQTGIQKEDKYKIKQIMHHFIPDLLFAQRGDLSDVEEEEE
EEMDVDEATGAAKKHNGVGGSPPKSKLLFSNTAAQKLRGMDEVYNLFYVNNNWYIFMRLH
QILCLRLLRICSQAERQIEEENREREWEREVLGIKRDKSDSPAIQLRLKEPMDVDVEDYY
PAFLDMVRSLLDGNIDSSQYEDSLREMFTIHAYIAFTMDKLIQSIVRQLQHIVSDEICVQ
VTDLYLAENNNGATGGQLNTQTSRSLLESTYQRKAEQLMSDENCFKLMFIQSQGQVQLTI
ELLDTEEENSDDPVEAERWSDYVERYMNSDTTSPELREHLARKPVFLPRNLRRIRKCQRG
REQQEKEGKEGNSKKTMENVDSLDKLECRFKLNSYKMVYVIKSEDYMYRRTALLRAHQSH
ERVSKRLHQRFQAWVDKWTKEHVPREMAAETSKWLMGEGLEGLVPCTTTCDTETLHFVSI
NKYRVKYGTVFKAP
NT seq
3825 nt
NT seq
+upstream
nt +downstream
nt
atgaagcgacgtttggatgaccaggagtcaccggtgtatgcggcccagcagcgtcggatc
cctggtagcacagaggcttttcctcaccagcaccgggtgcttgcccctgcccctcctgtg
tatgaagcagtgtccgagaccatgcagtcagctacgggaattcagtactccgtgacaccc
agctatcaggtttcagcagtgccgcagagctctggcagtcacgggcctaccatcgcagcg
gttcatagcagtcatcatcacccagcagctgtgcagccccatggaggccaggtggtccag
agtcatgctcatcccaccccaccagttgcaccagtgcagggacagcagcagtttcagagg
cttaaggtggaggatgcgctgtcctatcttgaccaggtgaagctgcaatttggtagtcag
cctcaggtctacaatgatttccttgacatcatgaaggaatttaaatctcagagcattgac
actccaggagtgattagtcgtgtgtcccagctgttcaaaggccaccccgacctgattatg
ggcttcaataccttcttgccccctggctacaagattgaggtgcaaaccaatgacatggtg
aacgtgacaactcctggccaggttcatcagatccccacccatggcatccagccccagcct
caaccaccaccccaacatccttcccagccttcagcccagtcagccccagctcctgcccag
ccagctcctcagcccccacctgccaaagtcagcaagccttctcaactacaagcacatact
ccagccagtcagcagactccccctctcccaccatatgcatccccgcgttctccgcctgtc
cagcctcatacaccagtgacaatctcgttgggaacggccccatccttgcagaacaatcag
cctgttgagtttaatcatgccatcaactatgttaataaaatcaagaacaggttccagggc
caaccagacatctacaaagcgttcctggagattttgcacacatatcagaaggagcaacga
aatgccaaggaagctggaggaaactacactccagccttgactgagcaggaggtatatgcc
caggtggctcgtctttttaaaaatcaggaagatctgttgtcagagtttggacagttccta
ccagatgccaacagctctgtgcttttaagcaaaacaactgctgagaaggttgattccgtg
agaaatgaccatggaggcactgtgaagaagccccagctgaacaacaagccacagaggccc
aaccagaatggctgccagatccgtcggcactctggaacaggaactacccctcctgtaaag
aagaaacctaaactgctcagcctaaaggattcttccatggcagatgccagcaagcatggt
gtaggaactgaatcattattttttgataaggtccgaaaggctctgcggagtgcagaggcc
tatgagaatttcctgcgctgtcttgttatctttaaccaggaggtgatctctcgggctgag
cttgtgcagctagtctctcctttcctggggaaattccctgaattgtttaattggtttaaa
aactttctgggctataaggaatctgtacatctggaaacctttccaaaggaacgagccaca
gagggtattgccatggagatagattatgcctcttgtaaacggttgggctccagctatcga
gccctaccaaagagttaccagcagcccaagtgtacaggacggactcctctctgtaaagag
gttttgaatgatacttgggtttccttcccttcctggtctgaggactccacctttgttagt
tccaagaaaacccagtatgaagaacacatctatcgttgtgaagatgaacgctttgagctt
gatgtagttttagagaccaatctggcaacgatccgggttctggaagcaatacagaagaag
ctttctcgcttgtctgctgaggaacaagccaaatttcgcttggacaacacccttgggggc
acgtcggaagttattcatcgaaaagcactccagaggatatatgctgataaagcagctgac
atcattgatggtctgaggaagaacccttccattgccgtcccaattgtccttaaaaggttg
aagatgaaagaggaagaatggcgagaagctcagagaggctttaacaaggtgtggagagag
caaaatgagaaatactacctgaagtctctggaccaccagggcatcaactttaaacagaac
gacaccaaggtcctgaggtcaaagagcttactcaacgagattgagagtatctatgatgag
aggcaagagcaggctacagaagacaatgccggtgtacctgttggcccacacctctccctt
gcctacgaagacaaacagatcctggaagatgccgctgctttgattatccaccacgtgaag
aggcagacaggcattcagaaggaggacaagtataaaatcaagcaaatcatgcatcatttc
attccagatctgctctttgctcagagaggtgatctctcggatgtggaggaagaggaagaa
gaagagatggatgtagatgaagccacaggggcggctaagaagcacaatggtgttgggggc
agtccccctaagtccaagctactgtttagtaacacagcagctcagaagttaagagggatg
gatgaagtatacaacctcttctatgttaataacaactggtatatctttatgcgactgcac
cagattctctgcttgcggctgctgaggatttgttcccaagctgaacggcaaattgaagaa
gaaaaccgagagagagagtgggaacgggaagtgctgggcataaaacgagacaagagcgac
agccctgccatccagctgcgtctcaaagaacctatggatgttgatgtagaagattattac
ccagctttcctggacatggtgcggagcctgctagatggcaacatagactcgtcgcaatac
gaagattcgctgagagagatgttcaccattcatgcctacattgccttcaccatggacaaa
ctaatccagagcattgtcagacagctgcagcacatcgtgagtgatgaaatctgtgtgcag
gtgactgacctctacctggcagaaaacaataatggggccacaggaggccagctgaacacg
cagacttccaggagtctcctggagtcaacatatcagcggaaggctgagcaactcatgtca
gatgagaattgctttaagcttatgtttattcagagccagggccaggttcagctgaccatt
gagctcctggacacagaagaggagaattcggatgaccctgtggaagcggagcgttggtca
gactatgtggagcgatacatgaattctgatactacctctcctgaacttcgtgagcacctg
gcacggaaaccagtatttctcccaaggaatctgaggcggatccggaaatgtcagcgtggt
cgagaacagcaggaaaaggaagggaaggaaggaaacagcaagaagaccatggagaatgtg
gatagcctggataaactggagtgtagattcaagttgaattcctacaagatggtgtacgtg
atcaagtcagaggactacatgtatcggagaactgccttgctccgggctcaccagtcccat
gagcgtgtaagcaagcggctacatcagaggttccaggcctgggtagataaatggaccaag
gagcatgtgccccgtgaaatggcagcagagaccagcaagtggctcatgggtgaggggctg
gagggcctggtgccctgtaccaccacctgtgacacagagaccctgcactttgtgagcatt
aacaagtaccgtgtcaaatatggcacagtgttcaaagccccgtaa
DBGET
integrated database retrieval system
