Ailuropoda melanoleuca (giant panda): 100477371
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Entry
100477371 CDS
T01329
Symbol
TRIM4
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM4
KO
K11998
tripartite motif-containing protein 4 [EC:
2.3.2.27
]
Organism
aml
Ailuropoda melanoleuca (giant panda)
Brite
KEGG Orthology (KO) [BR:
aml00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
aml04121
]
100477371 (TRIM4)
Enzymes [BR:
aml01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
100477371 (TRIM4)
Ubiquitin system [BR:
aml04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
100477371 (TRIM4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SPRY
zf-C3HC4_4
zf-RING_UBOX
zf-C3HC4
zf-B_box
zf-C3HC4_2
zf-C3HC4_3
PRY
zf-RING_2
zf-RING_5
RING_XB3-XBAT31
zf-RING_6
TRAF3_RING
DUF7633
zf-Nse
Motif
Other DBs
NCBI-GeneID:
100477371
NCBI-ProteinID:
XP_019649325
Ensembl:
ENSAMEG00000031466
UniProt:
A0A7N5JIT8
LinkDB
All DBs
Position
10:complement(6287385..6308362)
Genome browser
AA seq
474 aa
AA seq
DB search
MEAEDLQEDLTCSICLDYFDDPVSIECGHNFCRGCLHRSWAPGGGSFPCPECRQPSPLAA
LRPNWALARLTERMRLRRQGRVPPSQCDRHREALRLFCEDDQRPVCLVCRESREHQAHTM
TPIDEAFYSYREKLLKAQCSLKDKMKKAIYFQDMEVKNATEWKEKMKNQRIRFSAEFAKL
HRFLEEEEKLFLQSLSEEEEELKKKQNENTLKLHQKITSLKQLISEVREKSESPTLELLQ
NPKDVLTRSDSQDVNYSPEILTMKTVCQIPMMKEMLKRFQVAVSVVEDTAHPKLVFSQGG
RYVKNGASASSWPLFSSAWSYVSGWRNSQNTQFVGRFQHLPCVLGKNIFTSGKHYWEVEN
RDSLEIAVGVCRGDVMGLADGSEMCPHMGIWALSWGSTGYRPLTSSPVSPTKQEPALQRV
GVFLDSDAGDISFYSAVDGTHLHTFSCPLASRLRPFFWLSPLASLVIPAVTARK
NT seq
1425 nt
NT seq
+upstream
nt +downstream
nt
atggaagccgaggacctgcaggaggacctgacctgctctatctgcctggactatttcgac
gacccggtgtccatcgagtgtggccacaacttctgccgcggctgcctgcaccgcagctgg
gcgccgggcggcggctcgttcccctgccccgagtgccggcagccgtcgccgctcgctgcg
ctgcggcccaactgggccctggcccggctgacggagaggatgaggctccggcgccagggc
cgcgtgccccccagccagtgcgaccgccaccgggaagcgctgcggctcttctgcgaggac
gaccagcggcccgtgtgcttggtgtgcagggagtcccgggagcaccaggcgcacaccatg
acacccatcgacgaggccttctacagctaccgggagaagcttctaaaggctcagtgtagt
ctgaaggacaagatgaagaaagccatatactttcaggacatggaagtgaagaatgctacc
gagtggaaggagaagatgaagaatcagcgaataagattcagtgcagagtttgcaaagctg
caccgatttttggaggaggaagaaaaactgtttcttcagagcctgagcgaagaagaagaa
gagctgaagaagaaacagaatgagaacactttaaagctccaccagaagatcacttccttg
aagcagctcatctcagaggtccgggagaagagcgagagccccaccctggagctgcttcag
aatccaaaggatgtgttgaccaggagtgacagccaggatgtgaactattctcctgaaatt
ctaacgatgaagactgtatgccagataccgatgatgaaggaaatgctgaagcgattccaa
gtggctgtaagtgtggttgaagacacggctcatcccaagcttgtcttttcccaaggtggg
agatatgtgaaaaatggagcatcagccagttcttggccgttgttttcctcagcatggagc
tacgttagtggatggaggaactctcagaacacacagtttgtgggaagatttcagcactta
ccctgtgttttgggaaaaaacattttcacttcagggaaacattactgggaagttgagaac
cgagatagcctggagattgccgtgggggtgtgtcggggggacgtcatggggcttgctgat
ggttcagaaatgtgcccccacatgggcatttgggccctcagttggggttccactggctat
cggcccctgaccagctctcctgtaagtcccaccaagcaagagcctgctcttcagcgggtg
ggagttttcctagattctgatgctggggacatctccttctacagtgctgtggatggcaca
catctacacaccttctcttgtcctctcgcctcccgcctccggccgtttttttggttgagt
ccattagcatctttagtcatcccggcagtgacggctaggaaatga
DBGET
integrated database retrieval system
