Ailuropoda melanoleuca (giant panda): 100477459
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Entry
100477459 CDS
T01329
Symbol
SEMA6D
Name
(RefSeq) semaphorin-6D isoform X3
KO
K06842
semaphorin 6
Organism
aml
Ailuropoda melanoleuca (giant panda)
Pathway
aml04360
Axon guidance
Brite
KEGG Orthology (KO) [BR:
aml00001
]
09150 Organismal Systems
09158 Development and regeneration
04360 Axon guidance
100477459 (SEMA6D)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Sema
PSI
Motif
Other DBs
NCBI-GeneID:
100477459
NCBI-ProteinID:
XP_002917600
Ensembl:
ENSAMEG00000002021
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Position
5:complement(57893218..58498337)
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AA seq
1073 aa
AA seq
DB search
MRFFLLCAYMLLLMISQLRAVSFPEDDEPLNTVDYHYSRQYPVFRGRPSGNESQHRLDFQ
LMLKIRDTLYIAGRDQVYTVNLNEIPKTEVIPSKKLTWRSRQQDRENCAMKGKHKDECHN
FIKVFVPRNDEMVFVCGTNAFNPMCRYYKLNTLEYDGEEISGLARCPFDARQTNVALFAD
GKLYSATVADFLASDAVIYRSMGDGSALRTIKYDSKWIKEPHFLHAIEYGNYVYFFFQEI
AVEHNNLGKAVYSRVARICKNDMGGSQRVLEKHWTSFLKARLNCSVPGDSFFYFDVLQSI
TDIIQINGIPTVVGVFTTQLNSIPGSAVCAFSMDDIEKVFKGRFKEQKTPDSVWTAVPED
KVPKPRPGCCANHGLAEAYKTSIDFPDETLSFIKSHPLMDSAVPPIAEEPWFTKTRIRYR
LTAIAVDHTAGPHQNYTVIFVGSEAGVVLKVLAKTSPFSLNDSVLLEEIEAYNHAKCNAE
SEEDRKVISLQLDKDHHAVYVAFSSCVIHLPLSRCERYGSCKKSCVASRDPYCGWLSQGA
CGRVTPGMLVGGYEQDTEYGNTAHLGDCHEILPTSTTPDYKIFGGPTSDMEVSSPSVITM
ASIPEITPKVIDTWRPKLTSSRKFVVQDDPNTSDFTDPLSGTPKGVRWEVQSGESNQMVH
MNVLITCVFAAFVLGAFIAGVAVYCYRDVFVRKNRKIHKDAESAQSCTDSSGSFAKLNGL
FDSPVKEYQQNIDSPKLYSNLLTSRKELPPNGDTKSMVMDHRGQPPELAALPTPESTPVL
HQKTLQAMKSHSDKAHGHGASRKETPQFFPSSPPPHSPLSHGHIPSAIVLPNATHDYNTS
FSNSNAHKAEKKLQSIDHPLTKSSSKRDHRRSVDSRNTLNDLLKHLSDPNSNPKAIMGDI
QMAHQTLMLDPVGPMSEVPPKVPNREASLYSPPSTLPRNSPTKRVDVPTTPGVPMTSLER
QRGYHKNSSQRHSISAIPKNLNSPNGVLLSRQHSMNRGGYMPTPTGAKVDYIQGTPVSVH
LQPSLSRQSSYTSNGTLPRTGLKRTPSLKPDMPPKPSLVPQTTSVRPLNKYTY
NT seq
3222 nt
NT seq
+upstream
nt +downstream
nt
atgaggttcttcctgctttgtgcctacatgctgcttctgatgatttcccagctgagggca
gtcagctttcctgaagatgatgaacccctcaatactgttgattatcactattcaaggcaa
tatccggtttttagaggacgcccttcaggcaatgaatcccagcacaggctggactttcag
ctgatgttgaaaattcgagacacactttatattgctggcagggatcaagtttatacagta
aacttaaatgaaatccccaaaacagaagtaataccgagcaagaaactgacatggcggtca
agacaacaggaccgagaaaactgtgctatgaaaggcaaacataaagatgaatgccacaac
tttattaaagtgtttgttccaagaaacgatgagatggtttttgtatgtggtaccaatgca
tttaatcccatgtgtagatactataagttgaataccttagagtatgacggggaggaaatt
agtggcctggcaagatgcccatttgatgccagacaaaccaatgttgccctttttgctgat
gggaagctatattctgccacagttgctgacttcttggccagcgatgctgttatttatcga
agcatgggtgatggatctgcccttcgtacaataaaatatgattccaaatggataaaagag
ccacattttcttcatgccatagaatatggaaactatgtctatttcttctttcaagaaatt
gctgtagagcataataatttaggcaaggctgtgtattcccgtgtggcccgcatatgtaaa
aatgacatgggtggctcccagcgggtcctggagaaacactggacttcatttctgaaggct
cggcttaactgctctgtccccggagattcgtttttctactttgatgtcctgcagtctatt
acagacatcatacaaatcaatggcatccccactgtggtcggggtgttcaccacacagctc
aacagcattcctgggtctgcagtgtgtgcatttagcatggatgacattgaaaaggtattc
aaaggacggtttaaagaacagaaaactccagattctgtgtggacagcagttcccgaagac
aaagtaccaaagccaaggcctggctgttgtgcaaaccatggccttgccgaagcttataaa
acctccatcgatttccctgacgaaaccctgtcgttcatcaaatcccacccactaatggac
tctgccgtcccacctattgccgaggagccctggttcacaaagactcggatcaggtacaga
ctgacggccatcgctgttgaccacactgctgggccccaccagaactacacagtcatcttt
gttggctctgaagctggcgtggtgctcaaagttttggcaaagaccagccctttctctttg
aatgacagcgtattactggaagagattgaagcatacaaccatgcaaaatgtaatgctgag
agtgaggaggacagaaaggtcatctcattacagttggataaagaccatcacgctgtgtac
gtggcattctccagctgcgtcattcacctccccctcagtcgctgtgagcgttatggatcc
tgtaaaaagtcttgtgttgcatctcgggacccatactgtggctggttaagccagggggcc
tgcggcagagtgaccccagggatgctcgttggaggatatgaacaagacacagaatatggc
aacacggcccacctaggggactgccatgaaattttgcctacttcaactacaccagattac
aaaatatttggcggtccaacatctgacatggaggtatcttcaccatctgttatcacaatg
gcaagtatcccagaaatcacacctaaagtgattgatacctggagacctaaactgacgagc
tcccggaaatttgtagttcaagatgacccaaacacttctgattttactgatcctttatca
ggtaccccaaagggtgtacgatgggaggtccagtcgggagagtccaaccagatggtccac
atgaatgtcctcatcacctgtgtctttgctgcttttgttttgggtgcattcattgcaggt
gtcgcagtatactgctatcgtgacgtgtttgttcggaagaacagaaagatccacaaagat
gcagaatctgcccagtcgtgcacggactccagtgggagtttcgccaaactgaatggtctc
tttgacagcccggtcaaggagtatcaacagaatatcgattctcccaaattgtacagtaac
ctgctgaccagtcggaaagagctgccacccaacggagatactaaatccatggtaatggac
catcgaggccaaccacccgagctggctgctctccccacacctgagtctacacctgtcctt
caccagaagaccctgcaggccatgaagagccactcggacaaggcccatggccatggggct
tcaaggaaagaaaccccgcagtttttcccttctagcccaccgccccactccccactaagt
cacgggcatatccccagtgccattgttctccctaatgccactcatgactacaacacgtct
ttctcaaactccaatgctcacaaagctgaaaagaagcttcaaagcattgaccacccactt
acaaagtcatccagtaaaagagatcaccggcgttctgtggattccagaaataccctcaat
gatcttctgaagcatctaagtgacccaaacagcaaccccaaagccatcatgggagatatc
cagatggcccaccagaccctaatgctggatcctgtgggacctatgtctgaggtcccaccc
aaggtccctaaccgggaggcatcactctactctcctccttcaactctccccagaaacagc
ccaaccaaacgagtggacgtccccaccactcctggagtcccaatgacttctctggaaaga
caaaggggttaccacaaaaattcctcccagaggcactctatatctgcaatccctaaaaac
ttaaactcaccaaatggtgttttgttatctagacagcatagtatgaaccgtggaggctat
atgcccacccctactggggcaaaggtggactatattcagggaacaccagtgagtgttcat
ctgcagccttccctctccagacagagcagctataccagtaatggcacccttcctaggacg
ggactaaagaggacaccgtccttaaaacctgatatgccaccaaagccttcacttgttcct
caaaccacgtctgtcagaccactgaacaaatacacttactag
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