KEGG   Ailuropoda melanoleuca (giant panda): 100477459
Entry
100477459         CDS       T01329                                 
Symbol
SEMA6D
Name
(RefSeq) semaphorin-6D isoform X3
  KO
K06842  semaphorin 6
Organism
aml  Ailuropoda melanoleuca (giant panda)
Pathway
aml04360  Axon guidance
Brite
KEGG Orthology (KO) [BR:aml00001]
 09150 Organismal Systems
  09158 Development and regeneration
   04360 Axon guidance
    100477459 (SEMA6D)
SSDB
Motif
Pfam: Sema PSI
Other DBs
NCBI-GeneID: 100477459
NCBI-ProteinID: XP_002917600
Ensembl: ENSAMEG00000002021
LinkDB
Position
5:complement(57893218..58498337)
AA seq 1073 aa
MRFFLLCAYMLLLMISQLRAVSFPEDDEPLNTVDYHYSRQYPVFRGRPSGNESQHRLDFQ
LMLKIRDTLYIAGRDQVYTVNLNEIPKTEVIPSKKLTWRSRQQDRENCAMKGKHKDECHN
FIKVFVPRNDEMVFVCGTNAFNPMCRYYKLNTLEYDGEEISGLARCPFDARQTNVALFAD
GKLYSATVADFLASDAVIYRSMGDGSALRTIKYDSKWIKEPHFLHAIEYGNYVYFFFQEI
AVEHNNLGKAVYSRVARICKNDMGGSQRVLEKHWTSFLKARLNCSVPGDSFFYFDVLQSI
TDIIQINGIPTVVGVFTTQLNSIPGSAVCAFSMDDIEKVFKGRFKEQKTPDSVWTAVPED
KVPKPRPGCCANHGLAEAYKTSIDFPDETLSFIKSHPLMDSAVPPIAEEPWFTKTRIRYR
LTAIAVDHTAGPHQNYTVIFVGSEAGVVLKVLAKTSPFSLNDSVLLEEIEAYNHAKCNAE
SEEDRKVISLQLDKDHHAVYVAFSSCVIHLPLSRCERYGSCKKSCVASRDPYCGWLSQGA
CGRVTPGMLVGGYEQDTEYGNTAHLGDCHEILPTSTTPDYKIFGGPTSDMEVSSPSVITM
ASIPEITPKVIDTWRPKLTSSRKFVVQDDPNTSDFTDPLSGTPKGVRWEVQSGESNQMVH
MNVLITCVFAAFVLGAFIAGVAVYCYRDVFVRKNRKIHKDAESAQSCTDSSGSFAKLNGL
FDSPVKEYQQNIDSPKLYSNLLTSRKELPPNGDTKSMVMDHRGQPPELAALPTPESTPVL
HQKTLQAMKSHSDKAHGHGASRKETPQFFPSSPPPHSPLSHGHIPSAIVLPNATHDYNTS
FSNSNAHKAEKKLQSIDHPLTKSSSKRDHRRSVDSRNTLNDLLKHLSDPNSNPKAIMGDI
QMAHQTLMLDPVGPMSEVPPKVPNREASLYSPPSTLPRNSPTKRVDVPTTPGVPMTSLER
QRGYHKNSSQRHSISAIPKNLNSPNGVLLSRQHSMNRGGYMPTPTGAKVDYIQGTPVSVH
LQPSLSRQSSYTSNGTLPRTGLKRTPSLKPDMPPKPSLVPQTTSVRPLNKYTY
NT seq 3222 nt   +upstreamnt  +downstreamnt
atgaggttcttcctgctttgtgcctacatgctgcttctgatgatttcccagctgagggca
gtcagctttcctgaagatgatgaacccctcaatactgttgattatcactattcaaggcaa
tatccggtttttagaggacgcccttcaggcaatgaatcccagcacaggctggactttcag
ctgatgttgaaaattcgagacacactttatattgctggcagggatcaagtttatacagta
aacttaaatgaaatccccaaaacagaagtaataccgagcaagaaactgacatggcggtca
agacaacaggaccgagaaaactgtgctatgaaaggcaaacataaagatgaatgccacaac
tttattaaagtgtttgttccaagaaacgatgagatggtttttgtatgtggtaccaatgca
tttaatcccatgtgtagatactataagttgaataccttagagtatgacggggaggaaatt
agtggcctggcaagatgcccatttgatgccagacaaaccaatgttgccctttttgctgat
gggaagctatattctgccacagttgctgacttcttggccagcgatgctgttatttatcga
agcatgggtgatggatctgcccttcgtacaataaaatatgattccaaatggataaaagag
ccacattttcttcatgccatagaatatggaaactatgtctatttcttctttcaagaaatt
gctgtagagcataataatttaggcaaggctgtgtattcccgtgtggcccgcatatgtaaa
aatgacatgggtggctcccagcgggtcctggagaaacactggacttcatttctgaaggct
cggcttaactgctctgtccccggagattcgtttttctactttgatgtcctgcagtctatt
acagacatcatacaaatcaatggcatccccactgtggtcggggtgttcaccacacagctc
aacagcattcctgggtctgcagtgtgtgcatttagcatggatgacattgaaaaggtattc
aaaggacggtttaaagaacagaaaactccagattctgtgtggacagcagttcccgaagac
aaagtaccaaagccaaggcctggctgttgtgcaaaccatggccttgccgaagcttataaa
acctccatcgatttccctgacgaaaccctgtcgttcatcaaatcccacccactaatggac
tctgccgtcccacctattgccgaggagccctggttcacaaagactcggatcaggtacaga
ctgacggccatcgctgttgaccacactgctgggccccaccagaactacacagtcatcttt
gttggctctgaagctggcgtggtgctcaaagttttggcaaagaccagccctttctctttg
aatgacagcgtattactggaagagattgaagcatacaaccatgcaaaatgtaatgctgag
agtgaggaggacagaaaggtcatctcattacagttggataaagaccatcacgctgtgtac
gtggcattctccagctgcgtcattcacctccccctcagtcgctgtgagcgttatggatcc
tgtaaaaagtcttgtgttgcatctcgggacccatactgtggctggttaagccagggggcc
tgcggcagagtgaccccagggatgctcgttggaggatatgaacaagacacagaatatggc
aacacggcccacctaggggactgccatgaaattttgcctacttcaactacaccagattac
aaaatatttggcggtccaacatctgacatggaggtatcttcaccatctgttatcacaatg
gcaagtatcccagaaatcacacctaaagtgattgatacctggagacctaaactgacgagc
tcccggaaatttgtagttcaagatgacccaaacacttctgattttactgatcctttatca
ggtaccccaaagggtgtacgatgggaggtccagtcgggagagtccaaccagatggtccac
atgaatgtcctcatcacctgtgtctttgctgcttttgttttgggtgcattcattgcaggt
gtcgcagtatactgctatcgtgacgtgtttgttcggaagaacagaaagatccacaaagat
gcagaatctgcccagtcgtgcacggactccagtgggagtttcgccaaactgaatggtctc
tttgacagcccggtcaaggagtatcaacagaatatcgattctcccaaattgtacagtaac
ctgctgaccagtcggaaagagctgccacccaacggagatactaaatccatggtaatggac
catcgaggccaaccacccgagctggctgctctccccacacctgagtctacacctgtcctt
caccagaagaccctgcaggccatgaagagccactcggacaaggcccatggccatggggct
tcaaggaaagaaaccccgcagtttttcccttctagcccaccgccccactccccactaagt
cacgggcatatccccagtgccattgttctccctaatgccactcatgactacaacacgtct
ttctcaaactccaatgctcacaaagctgaaaagaagcttcaaagcattgaccacccactt
acaaagtcatccagtaaaagagatcaccggcgttctgtggattccagaaataccctcaat
gatcttctgaagcatctaagtgacccaaacagcaaccccaaagccatcatgggagatatc
cagatggcccaccagaccctaatgctggatcctgtgggacctatgtctgaggtcccaccc
aaggtccctaaccgggaggcatcactctactctcctccttcaactctccccagaaacagc
ccaaccaaacgagtggacgtccccaccactcctggagtcccaatgacttctctggaaaga
caaaggggttaccacaaaaattcctcccagaggcactctatatctgcaatccctaaaaac
ttaaactcaccaaatggtgttttgttatctagacagcatagtatgaaccgtggaggctat
atgcccacccctactggggcaaaggtggactatattcagggaacaccagtgagtgttcat
ctgcagccttccctctccagacagagcagctataccagtaatggcacccttcctaggacg
ggactaaagaggacaccgtccttaaaacctgatatgccaccaaagccttcacttgttcct
caaaccacgtctgtcagaccactgaacaaatacacttactag

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