Ailuropoda melanoleuca (giant panda): 100477462
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Entry
100477462 CDS
T01329
Symbol
SH3TC2
Name
(RefSeq) SH3 domain and tetratricopeptide repeat-containing protein 2
KO
K24313
SH3 domain and tetratricopeptide repeat-containing protein
Organism
aml
Ailuropoda melanoleuca (giant panda)
Brite
KEGG Orthology (KO) [BR:
aml00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
aml04131
]
100477462 (SH3TC2)
Membrane trafficking [BR:
aml04131
]
Protein recycling
Rab GTPases and associated proteins
Rab11 associated proteins
100477462 (SH3TC2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SH3_2
TPR_12
SH3_1
SH3_9
TPR_1
SNAP
TPR_8
TPR_MalT
TPR_2
DUF5418
TPR_7
Motif
Other DBs
NCBI-GeneID:
100477462
NCBI-ProteinID:
XP_011221864
Ensembl:
ENSAMEG00000005533
UniProt:
G1LG40
LinkDB
All DBs
Position
3:106985471..107043029
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AA seq
1289 aa
AA seq
DB search
MGGCFCIPGEPSLSWGPGKETPSKDPTISSEFIASSEDKEKCFLTQNMIPDLTLSFSVKS
RSRRCVNGLLQEAARRRLWALENEDQEVRALFQDLSARLVGIQSQKAQFLITFKTMEEIW
KFSTYLNLGYVSACLEHLLFDHKYWLNCRLVEDTEIQVSVDEKHLETIYLGLLIQEGHFF
CRALCSVSQPAEKEGEYLTLCKKELVSVKTVEGESEWEGVSLVTGQRGLVPLSALEPLPL
PFHQWFLKNYPGSCGLCRKRDWTGSYQIGRGKCKAWKEYEREEKDELTFRRGESIEIIGF
VIPGLQWFIGKSTHSGEVGFVPTRNIDPESYSPMNKSSAFFSDEERCSLWVLGSDRKAEC
ASFLHTLAHTDIASVYRLSGFESIQNLPNDLSASKPEGFKEARPGRAREEHQAVGSRQSS
SSEDSSLEEELLSATSDSYHLPEPDDLDDPELLVDLNTGQEEEEAENFAPILAFLDHEGY
ADHFKSLYDFSFSFLTSSFYSFSEEDELVAYLEASRKWAKRSCRTWAHARLCFLLGRLSV
RKVKLSQARLYFEEARYILDGTFEDLSLVAALYINLAAIYLRQRLRHKGSSLLEKAGALL
ACLPDRESSTKNELDVVAYVLRQSIVAGSCPLEARACFLAIRLLLSLGRHEEVLPFAERL
QVLSGHPPDLEATATILSFLYDKKYLPHLVVASVQERGTQSGQGMSLPIWQVYLVLQNTT
KLLGVPSSSWGEVSALACPALRRALAACEEQVNWSAQRALCLILSKVYLQHRSPDGAIHY
LSQALVLGQLLSEQEAFESSLCLAWAYLLASQAKKALDILEPLLYSQKDTESITQKGVVH
NLLGLALQGEGRVNRAAKSYLRALNRAQEMGNVRNQAVTLANLGHLTLKSWAQQPAKDYL
LQAVRLYSELQTSMETDMELVQVLLWLAPVLVHGRQLASGRLCYEMALLFGLRHRHLKSQ
LQVTKSLCHFYSSVSPSPKACITYHEHWLSLAQQLRDREMEGRLLESLGQLYRNLNTARS
LRKSLACIKESLRIFIDLGEKDKAAEAWLGAGRLHYLMQEDELVELYLQAAIQKALKSEE
PSLALKLYEEAGDVFFNGTRHRHRAVEYYRAGAVPLARRMKAMRTELRVFNKLTELQISL
EGYEKALEFATLAARLSMVIGDPKQELVAFHRLATVYYSLRMYEMAEDCYLKTLSLCPPW
LQSPKEALYYSKVYYRLGRLAFCQLKDAHDATEYFRLALAAAVLLGDEALQDSIRSRLDN
IRRSPLWHSSPSGRSSERARWLSRGGLAL
NT seq
3870 nt
NT seq
+upstream
nt +downstream
nt
atgggtggctgcttctgcattcccggggagccgagtctgtcctggggcccaggtaaagaa
actccttccaaggatccaaccatatcgagtgagtttatagcctcatctgaagacaaggaa
aaatgtttcctgacacagaatatgattccagatctgacgctctctttcagtgtgaagagc
cgctcccggaggtgtgtaaacggcctcctgcaggaagcggccaggaggcggctgtgggcg
ctggagaatgaggaccaggaggtgcgtgccctgtttcaggacctctcagccaggttggtg
ggtatccagtcccagaaggctcagttcctcatcaccttcaagaccatggaggaaatctgg
aagttttctacctacttgaacttaggctatgtatctgcatgtctggaacatctcctcttt
gaccacaagtactggctcaactgcagattggtggaagatacagagatccaagtgtcagtg
gatgagaaacacctggaaacaatatacctgggactcctgatacaggaaggccacttcttc
tgcagagccctgtgctccgtgtctcagccagctgagaaggaaggggaatatttgacgctt
tgtaagaaggagttagtctctgtgaagacagttgaaggcgaatccgagtgggagggcgtg
tccttggtgacgggtcagcggggcctggtgcccctgtcagctctggaacctctgccactc
cctttccaccaatggttcctaaagaattatccaggaagctgtggcctttgcaggaagagg
gattggacaggctcctatcagatcggcagaggaaaatgtaaggcctggaaggaatatgag
agggaagaaaaggatgagctgacttttcgccggggagaaagcatcgagatcatcggtttt
gtcatacctgggcttcagtggttcattgggaagtcgacacactcaggagaagtgggcttt
gttcccaccaggaacatagatcccgagtcgtattccccaatgaacaagagctccgccttt
ttcagtgacgaggaaagatgctctctgtgggtcctgggaagtgacaggaaagctgagtgt
gccagcttcctccacacgcttgctcataccgacatagcgtctgtctaccggcttagtggg
tttgaatccatccagaatcttccaaacgatctaagtgcgtccaagcctgaaggcttcaag
gaggccaggcctggcagagccagggaggagcatcaggccgtgggctccagacagtccagc
agctctgaggactccagcctggaggaggagctcctctcagccacctcggacagctatcac
ttgccagagcccgatgacctcgatgacccggaactcctcgtggacttaaacactggtcag
gaagaggaggaggctgagaactttgcccccatattggcttttctggatcacgagggttac
gctgaccactttaagagcctctatgatttctccttctctttcctcacatcttccttttat
agcttctctgaggaggatgaacttgtggcctacctggaggcctcaaggaagtgggccaag
cggagctgcaggacctgggcccacgccaggctctgcttcctcctgggccggctgagtgtc
aggaaggtcaaactctctcaggccaggttgtactttgaggaggctaggtacatccttgat
gggacatttgaagacctatccttggtggccgctctgtatatcaatctggctgccatctac
ctgaggcagaggctgaggcataaaggctcgtctctgctggaaaaagcaggggcgctgttg
gcctgcctgcctgaccgtgagtctagtaccaagaacgagctcgatgtggtggcctacgta
ctacgccagagcattgtggcaggcagctgtcccttggaggccagggcctgcttcctggcc
atccgattgctcctgagcctaggccggcatgaggaggtcctgcccttcgccgagcgcctg
caggtcctctccggacaccctcctgacttggaggctacagcaaccatcttgagttttctg
tacgataagaaatatctcccacacctggtagtggcctctgtccaggaacgtggtacccag
agtggccaagggatgtcccttccaatttggcaggtctacctggttctccagaacaccacc
aaactccttggagtcccctcttcaagctggggtgaagtttctgccctggcctgcccagca
ctcaggcgggcgctggctgcctgtgaggaacaggtcaattggagcgcccagagggccctg
tgtctcatcctgtccaaagtgtacctccaacacaggtctcctgacggtgccatccactac
ctgagccaggccttggtgctggggcagctgctgagtgagcaggaagcctttgagtcttct
ctctgcctggcgtgggcgtatctcttagccagccaagcaaagaaggctttggacatcctc
gagccactcctatactcccagaaggatacagagagtatcacccaaaagggggtggtccat
aacctcctgggacttgcacttcaaggtgaaggccgggtgaacagggcagccaagagctat
ctccgggccttgaacagagctcaggaaatggggaatgtgcgtaaccaggcggtgactttg
gccaatcttggccacctgacccttaagtcctgggctcagcagccagccaaggactatctc
ctgcaggccgtccgactctattctgagctccagaccagcatggagacagacatggaattg
gtacaggtccttctctggttggccccggtgctggtgcatggacgccagctggccagcggc
cgcctgtgttatgagatggcattgctgtttggcttaaggcatcgacacctaaagagtcag
cttcaggtcaccaaatccctctgccatttctacagctctgtatccccaagccccaaggca
tgcatcacctaccacgagcactggctgagcctggctcagcaactcagggaccgagagatg
gaggggaggctgctggagtccctcgggcagctctatcggaacctgaacacagccaggtct
ctcaggaagtctctcgcctgcatcaaggagagcctgcgtatcttcattgaccttggggag
aaagacaaggctgctgaggcctggctcggagctgggcggcttcactacctcatgcaggaa
gatgagctggtggagctctacctgcaggcagccatccagaaagccctgaagtctgaggag
ccctctctggctctcaaactctatgaagaagcaggtgacgtgttcttcaacgggacccgc
cacagacaccgcgcggtggagtattaccgagctggggctgttcctttagcgaggaggatg
aaggccatgagaacggagctccgggttttcaacaagctgacggagctgcagatcagcctg
gaaggctatgagaaggctttggagtttgccaccctggcggccagactcagcatggtcata
ggagatccgaagcaggagctggtggccttccaccgtctggctacagtctactattcccta
cgcatgtacgagatggctgaggactgctacctgaagactctgtccctctgtcccccctgg
ctgcagagccctaaggaggccctgtactactcgaaggtgtactatcgcctgggccgcctc
gccttctgccagctgaaggatgctcacgacgccaccgagtacttccggctggccctggca
gcggcggtcctgctgggtgacgaggcgctgcaggacagcatcaggagcaggctggacaac
atccgccggagccccctgtggcacagcagcccctccggccgctcctcagagagggcgcgg
tggctgagccgaggggggctggccctctga
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