Ailuropoda melanoleuca (giant panda): 100477510
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Entry
100477510 CDS
T01329
Symbol
TRIM33
Name
(RefSeq) LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase TRIM33
KO
K08883
tripartite motif-containing protein 33 [EC:
2.3.2.27
]
Organism
aml
Ailuropoda melanoleuca (giant panda)
Brite
KEGG Orthology (KO) [BR:
aml00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
aml01001
]
100477510 (TRIM33)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
aml04121
]
100477510 (TRIM33)
Enzymes [BR:
aml01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
100477510 (TRIM33)
Protein kinases [BR:
aml01001
]
Serine/threonine kinases: Other
TIF1 family [OT]
100477510 (TRIM33)
Ubiquitin system [BR:
aml04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
100477510 (TRIM33)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Bromodomain
zf-B_box
ANCHR-like_BBOX
PHD
zf-B_box_Trim66
zf-RING_UBOX
DEXQc_Suv3
zf-RING_5
PHD-1st_NSD
UvrA_inter
Motif
Other DBs
NCBI-GeneID:
100477510
NCBI-ProteinID:
XP_034497635
Ensembl:
ENSAMEG00000000663
LinkDB
All DBs
Position
2:complement(80738966..80869709)
Genome browser
AA seq
1264 aa
AA seq
DB search
MRNRYLLECKDGLHKISDFRIPPNRNPEARAIQWEVIFRSGPMNSGIPKHLSAKSGVSCG
SLKLLAHEILEAKKKRKKKAPFHGSPEAQPPKGPQPVKAPSPRSSAPQSQQATTFDPAAT
EVRAETRQPLGAAPPGRRWLGRDGPGLLPSYAFPLFSPHHRCVRAHNHCRPKTAERQQPL
ALNSPRKPSSCGVDTTRWCLRSGQRGGASGSAPAASAPAASVGPGVPGGAVSTPAPAPAS
APAPGPSAGPPPGPPASLLDTCAVCQQSLQSRREAEPKLLPCLHSFCLRCLPEPERQLSV
PIPGGSNGDIQQVGVIRCPVCRQECRQIDLVDNYFVKDTSEAPSSSDEKSEQVCTSCEDN
ASAVGFCVECGEWLCKTCIEAHQRVKFTKDHLIRKKEDVSESVGASGQRPVFCPVHKQEQ
LKLFCETCDRLTCRDCQLLEHKEHRYQFLEEAFQNQKGAIENLLAKLLEKKNYVHFAATQ
VQNRIKEVNETNKRVEQEIKVAIFTLINEINKKGKSLLQQLENVTKERQMKLLQQQNDIT
GLSRQVKHVMNFTNWAIASGSSTALLYSKRLITFQLRHILKARCDPVPAANGAIRFHCDP
TFWAKNVVNLGNLVIESKPAPGYTPNVVVGQVPPGTNHISKTPGQINLAQLRLQHMQQQV
YAQKHQQLQQMRMQQPPAPVSTTTTTTQQHPRQAAPQMLQQQPPRLISVQTMQRGNMNCG
AFQAHQMRLAQNAARIPGIPRHSGPQYSMMQPHLQRQHSNPGHAGPFPVVSVHNTTINPT
SPTTATMANANRGPTSPSVTAIELIPSVTNPENLPSLPDIPPIQLEDAGSSSLDNLLSRY
ISGSHLPPQPTSTMNPSPGPSALSPGSSGLSNSHTPVRPPSTSSTGSRGSCGSSGRTAEK
TGLSFKSDQVKVKQEPGTEDEICSFSGAVKQEKTEDGRRSACMLSSPESSLTPPLSTNLH
LESELDALASLENHVKTEPADTNESCKQSGLSSLVNGKSPIRSLVHRSSRIGGDGNSKDD
DPNEDWCAVCQNGGDLLCCEKCPKVFHLTCHVPTLLSFPSGDWICTFCRDIGKPEVEYDC
DNLQHSKKGKTAQGLSPVDQRKCERLLLYLYCHELSIEFQEPVPASIPNYYKIIKKPMDL
STVKKKLQKKHSQHYQIPDDFVADVRLIFKNCERFNEMMKVVQVYAETQEINLKADSEVA
QAGKAVALYFEDKLTEIYSDRTFAPLPEFEQEEDDGEVTEDSDEDFIQPRRKRLKSDERP
VHIK
NT seq
3795 nt
NT seq
+upstream
nt +downstream
nt
atgcgaaacagatatttgttggaatgtaaggatggtctacataaaatcagtgacttcaga
ataccacctaaccggaacccggaagccagagccatacagtgggaggtgatattccgttcc
ggccccatgaacagtggaatcccaaaacacttgtcagcaaaatctggagtttcttgtggc
tctttaaaattactggcacatgagatccttgaagcaaaaaagaaaaggaaaaaaaaggcc
ccgtttcacggctcccctgaggcacaaccacccaaaggaccgcagccggtgaaggcaccg
agccccaggagttccgcacctcagagccagcaggctacgactttcgaccctgcggcaact
gaggttcgcgccgagacgcgccagcctctgggggcggcgccgcccgggagacgctggctc
ggaagggacggtcccggcctcctaccctcctacgctttcccgcttttctccccgcaccac
cgctgtgtccgagctcataaccactgccggccaaagacggctgagcgtcaacagccacta
gctttaaacagtcccaggaagccgagcagctgcggcgtggacacaactcggtggtgcctg
aggtcggggcaacgggggggggcgtccggctcggccccggctgcctcagcccctgcggcc
tcagtgggccctggagttcccgggggggcggtatcgacgccggccccagctccagcctcg
gctcccgctccgggtccgtcggcggggccgcctcctggaccgccagcctcgctcctggac
acctgcgccgtgtgtcagcagagcttgcagagccggcgtgaggcggagcccaagctgctg
ccctgccttcactccttctgcctgcgctgcctgcccgagccggagcgccagctcagcgtg
cccatcccggggggcagcaacggcgacatccagcaagttggtgtaatacggtgcccagta
tgccgccaagaatgcagacagatagaccttgtggataattattttgtgaaagatacatct
gaagctcctagcagttctgatgagaaatcagaacaggtatgtactagttgtgaagacaat
gcaagtgcagttggcttttgtgtagaatgtggagagtggctatgtaagacatgtattgaa
gcacatcaaagagtaaaattcactaaagatcacttgatcaggaagaaagaagatgtctca
gaatctgttggagcatctggtcagcgccctgttttctgccctgtacacaaacaagagcaa
ttgaaacttttctgtgaaacatgtgatagattgacatgtagagactgtcagctgttggaa
cacaaagaacatagatatcagtttttggaagaagcttttcagaaccagaaaggtgcaatt
gagaatctactggctaagcttcttgagaagaagaattatgttcattttgccgccactcag
gtgcagaataggataaaagaagtaaatgagactaacaaacgagtagaacaggaaattaaa
gtggccattttcacccttatcaatgaaattaataagaaaggaaaatctctcttacagcag
ctagagaatgttacaaaagaaagacagatgaagttactgcagcagcagaacgacatcaca
ggcctttcccggcaggtgaagcatgttatgaactttacaaactgggcaattgcgagtggc
agcagcacagcactactgtacagcaagcgtctgattacttttcaattgcgccatattttg
aaagcacggtgtgatcctgtgcctgctgctaatggagcaattcgtttccattgtgatccc
accttctgggcaaagaatgtagtcaatttaggtaatctagtaatagagagtaaaccagct
cctggttatactcctaatgttgtagttgggcaagttcctccagggacaaaccacattagt
aaaacccctggacagattaacttagcacagcttcgactccagcacatgcaacaacaagta
tatgcacagaaacatcagcagttgcaacagatgagaatgcagcaaccacctgcacctgtg
tcaacaacaacaacaacaacacagcagcaccctagacaagcagccccacagatgttacag
caacagcctccgagattgatcagtgtgcaaacaatgcaaagaggcaacatgaactgtgga
gctttccaagcccatcagatgcgattggctcagaatgctgcccgaataccagggataccc
aggcacagcggccctcagtattccatgatgcagccacacctccaaagacaacactcaaac
ccagggcatgctggaccctttcctgttgtgtcagtgcacaacaccacaatcaatccaacc
agccctactacagctacgatggcaaatgcaaatcgaggtcccaccagcccatctgttaca
gcaatagaactaattccctcagttaccaatcctgaaaaccttccatcattgccagatatt
ccacccatacagttggaagatgctggttcaagtagtttagataatctactaagtagatac
atctcaggcagtcacctacccccacagcctacaagcaccatgaatccctccccaggaccc
tctgccctgtctccaggatcatcaggtttatccaattctcacacacctgtgagaccccct
agtacctctagtactggcagtcgagggagctgtggatcatcaggaagaactgctgagaag
acaggtcttagtttcaagtctgatcaagtgaaggtcaagcaagaacctgggactgaagat
gaaatatgtagtttttcaggagctgtgaaacaagaaaagacagaggatggcaggaggagt
gcctgcatgttgagcagtcctgagagtagcttgacaccacctctctcaaccaacctgcat
ctagagagtgaattggatgcattagcaagcctggaaaaccatgtgaaaactgaacctgca
gatacaaatgaaagctgcaaacagtcggggctcagcagccttgttaatggaaagtccccg
attcgaagcctcgtacacaggtcgtcaaggattggaggagatggcaatagcaaagatgat
gacccaaatgaagactggtgtgctgtctgccaaaatggaggggatctcttgtgctgtgaa
aaatgtccaaaggtctttcatctaacttgtcatgttccaacacttcttagcttcccaagt
ggggactggatatgcacattttgcagagatattgggaaaccagaagttgaatatgattgt
gataatttgcaacatagtaagaaggggaaaactgcacaagggttaagccccgtggaccaa
aggaaatgtgaacgtcttctgctttacctctattgccatgaattgagtattgaattccag
gagccagttcctgcttcgataccaaactactataaaattataaagaaaccaatggattta
tccaccgtgaaaaagaagcttcagaaaaaacattcccaacactaccaaatcccagatgac
tttgtggctgatgtccgtttgatcttcaagaactgtgaaaggtttaatgaaatgatgaaa
gttgttcaagtttatgcagaaacacaagagattaatttgaaggctgattcagaagtagct
caggcagggaaagcagttgcattgtactttgaagataaactcacagagatctactcagac
aggaccttcgcacctttgccagagtttgagcaggaagaggatgatggtgaggtaactgag
gactctgatgaagactttatacagccccgcaggaaacgcctaaagtcagatgagagacca
gtacatataaagtaa
DBGET
integrated database retrieval system
