KEGG   Ailuropoda melanoleuca (giant panda): 100477642
Entry
100477642         CDS       T01329                                 
Symbol
NISCH
Name
(RefSeq) nischarin
  KO
K24095  nischarin
Organism
aml  Ailuropoda melanoleuca (giant panda)
Brite
KEGG Orthology (KO) [BR:aml00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04990 Domain-containing proteins not elsewhere classified [BR:aml04990]
    100477642 (NISCH)
Domain-containing proteins not elsewhere classified [BR:aml04990]
 Phox homology (PX) domain-containing proteins
  Other PX domain-containing proteins
   100477642 (NISCH)
SSDB
Motif
Pfam: PX LRR_4 LRR_8 LRR_9 LRR_14 LRR_NXF1-5 PH_PLEKHM2
Other DBs
NCBI-GeneID: 100477642
NCBI-ProteinID: XP_034513104
Ensembl: ENSAMEG00000008715
LinkDB
Position
4:20487306..20519196
AA seq 1514 aa
MGEVVIQADTKVYIIQVTDGSHEWTVRHRYSDFYDLHEKLVAEKKIDKNLLPPKKIIGKN
SRSLVEKREKDLEVYLQTLLAAFPGVAPSVLAHFLHFHLYEINGITAALAEELFEKGEQL
LGAGEVFAIGPLQLYAVTEQLQQGKPTCASGDAKTDLGHILDFTCRLKYLKVSGTEGPFG
TSNIQEQLLPFDLSIFKSLHQVEISHCGARYIRGLVASKPTLATMSVRFSATSMKEVLVP
EASEFDEWEPEGTALEGPVTAVIPTWQALTTLDLSHNSISEIDESVKLIPKIEFLDLSHN
GVLVVDNLQHLYNLVHLDLSYNKLSSLEGVHTKLGNIKTLNLAGNLLESLSGLHKLYSLV
NLDLRDNRIEQMEEVRSIGSLPCLEHVALLNNPLSIIPDYRTKVLAQFGERASEVCLDST
ATTEKELDTVEVLKAIQKAKEVKSKLNNPEKKIIEDSRLSATPCVRPSGSPPSVAPTSAS
LPQPILSNQGIMFVQEEALASSLSSTDSLTPEDQPIARGCSDSLESIPSGQAPSDDLRDI
PGAVGGVSPEHAEPEVQVVPGSGQIIFLPFTCIGYTATNQDFIQRLSTLIRQAIERQLPA
WIEAANQREEAQGEQGEDDDDDEEDAAENRYFEMGPPDAEEEEEGGRGEDEEDEEEEEEE
GEEERLALEWALGADEDFLLEHIRILKVLWCFLIHVQGSIRQFAACLVLTDFGIAVFEIP
HQESRGSSQHILSSLRFVFCFPHGDLTEFGFLMPELCLVLKVRHSENTLFIISDAANLHE
FHADLRSCFAPQHMAMLCSPVLYGSHTSLQEFLRQLLTFYKVAGGCQERSQGCFPVYLVY
SDKRMVQTAAGDYSGNIEWASCTLCSAVRRSCCAPSEAVKSAAIPYWLLLTPQHLNVIKA
DFNPMPNRGTHNCRNRNSFKLSRVPLSTVLLDPTRSCTQPRGAFADGHVLELLVGYRFVT
AIFVLPHEKFHFLRIYNQLRASLQDLKTVVIAKTPATGAGSQSPLVEGQAAEGEASNDQR
PQEAPAEAPAPAPAPGPAPAPAPAPAPAEAPALDLAPVEGPAPALEEPSGPTKASGPVEA
SAPAEASAPEESPEETPAESPAPGEPQVQAEAPAQYPSEQLIRSTSEENQIPSHLPACPS
LRHIASLQGSTIIELFHSSIAEVENEELRHLLWSSVVFYQTPGLEVTACVLLSTKAVYFV
LHDGLRRYFSEPLQDFWHQKNTDYNNSPFHISQCFVLKLSDLQAVNVGLFDQYFRLTGSS
PMQVVTCLTRDSYLTHCFLQHLMGVLSSLERTPSPEPVDKDFYSEFGNKTTGKLENYELI
HSSRVKFTYPSEEEIGDLTFTVAQKMADPEKAPALSILLYVQAFQVGTPPPGRCRGMLRP
KTLLLTSAEIFLLDEDFVHYPLPEFAKEPPQRDRYRLDDGRRVRDLDRVLMGYQTYPQAL
TLVFDDVQGHDLMGSVTLDHFGEVPGGSTRAGQGREVQWQVFVPSAESREKLISLLARQW
EALCGRELPVELTG
NT seq 4545 nt   +upstreamnt  +downstreamnt
atgggggaagtggtgatccaggctgacacaaaggtgtatatcatccaggtcactgatggc
agccatgaatggacagtcaggcaccgctacagcgatttctatgacctacacgagaagctg
gttgcagaaaagaaaattgataaaaatctgctcccgcctaaaaagatcattgggaaaaac
tcaagaagcttggtggaaaagagggagaaggatctagaggtctatctgcagacactcctg
gccgccttccctggcgtggcccccagcgtgctggcccacttcttacattttcatctctac
gagataaatggcatcaccgcagccctggctgaggagctctttgaaaaaggagaacagctc
ctgggggccggcgaggtctttgccatcgggcccctgcagctctacgcggtcaccgagcag
ctgcagcagggaaagcccacgtgtgccagtggggacgccaagactgacctcgggcacatc
ctggacttcacctgtcgccttaagtaccttaaggtttccggcacagaaggaccatttggg
accagcaacattcaagagcaactcctgccttttgatctgtcaatattcaagtctcttcac
caggtggagataagtcactgtggtgccaggtacatccggggactcgttgcgtcaaagccc
accttagccacgatgagcgtccgcttctccgcaacctctatgaaggaagtccttgttccc
gaagcctcggaatttgatgagtgggagccagaaggcacagccctggaaggccctgtgacc
gccgtcatccccacgtggcaggcactgaccactctagacctgagccacaacagcatctct
gagatcgacgagtctgtgaaactgatcccaaagattgagttcctggacctgagtcataac
ggagtgctggtcgtggataacctgcagcacctgtacaacctcgtgcacctggacctgtcc
tacaacaagctctcgtccttggaaggggtgcacaccaaactggggaacatcaagaccctc
aacctggcgggcaacctcctggagagtctgagtggcctgcacaagctctattccctggtc
aacctggacctccgcgacaacaggatcgagcagatggaggaggtcaggagcattggcagc
ctcccgtgtctggagcacgtggccctgctgaacaaccccctgagcatcatccctgattac
cgaaccaaggtgctggcacagtttggagagagggcctccgaggtctgtctggacagcaca
gcaaccacagagaaggagctggacaccgtggaagtactaaaagcaattcagaaagccaag
gaggtcaagtcaaagctgaacaacccagagaagaagatcattgaggattcccggctctca
gctaccccctgcgtccgacctagcggctcccctcccagcgtggctcccacttctgcctcc
ctgccccagcccatcctctccaaccaaggtatcatgttcgtgcaggaggaggccctggcc
agcagcctctcatccaccgacagcctgactcccgaggaccagcccattgcccggggctgc
tccgattccttggagtccatcccctccggacaggcaccttctgatgatttacgggacata
cccggagctgttggcggtgtgagcccggagcacgcggagcctgaggttcaggtggtgccc
ggctccggccagatcatcttcctgcccttcacctgcatcggctacacagccaccaaccag
gacttcatccagcgcctgagcaccctcatccggcaggccatcgagcggcagctgcccgcc
tggatcgaggctgccaaccagcgggaggaggcccagggcgagcagggagaggacgacgac
gacgatgaggaggacgccgctgagaaccgctactttgagatggggcccccagacgcagag
gaagaggaggagggcggccggggggaagacgaggaggacgaggaggaggaggaggaggaa
ggcgaggaggagcgcctggccctggagtgggccctgggcgccgacgaggacttcctgctg
gagcacatccgcatcctcaaggtgctctggtgcttcctgatccacgtgcagggcagcatc
cgccagttcgccgcctgcctcgtgctcaccgacttcggcattgccgtcttcgagatcccg
caccaggagtcgcggggcagcagccagcacatcctctcgtccctgcgcttcgtcttctgc
ttcccgcacggcgacctcaccgagttcggcttcctcatgccggagctgtgcctagtgctg
aaggtgcggcacagcgagaacacgctgttcatcatctcggacgctgccaacctgcacgag
ttccacgccgacctgcgctcctgcttcgcgccgcagcacatggccatgctgtgcagcccc
gtgctctacggcagccacaccagcctgcaggagttcctccgccagctgctcaccttttat
aaggtggcgggcggctgccaggagcgcagccagggctgcttccccgtctacctggtctac
agcgacaagcgcatggtgcagaccgctgccggggactactcgggcaacatcgagtgggcc
agctgcacgctctgctcggccgtgcggcgctcctgctgcgcgccctccgaggccgtcaag
tctgctgccatcccctactggctgctgctcactccccagcacctcaacgtcatcaaggcc
gacttcaaccccatgcccaaccgtggcacccacaactgtcgcaaccgcaacagcttcaag
ctcagccgagtgccgctgtccacggtgctgctggaccccacgcgcagctgcacccagccg
cggggcgccttcgccgacggccacgtgctggagctgctcgtgggctaccgctttgtcact
gccatctttgtgctgccccatgagaagttccacttcctgcgtatctacaaccagctacgg
gcctcgctgcaggacctgaagaccgtggtcatcgccaagaccccagcgactggggctggg
tcccagagccccctcgtggaaggccaagctgccgagggcgaggccagcaatgaccagcgg
ccccaggaggccccagcagaggctccagctccagccccggctccaggcccagccccagcc
ccagccccagctccagccccggcggaggcgccagcgttagacctggccccggtggagggc
ccagctccggccctggaagagccctcaggcccaacaaaggcctcgggcccagtggaggct
tcggccccagcagaggcctcggccccagaggagtccccagaggagaccccggcagagagc
ccagccccaggcgagccccaggtgcaggcggaggcccctgctcagtacccaagcgagcag
ctgatccggtccacctcggaggagaatcagatcccctcgcacctgcccgcctgcccgtcg
ctccggcacatcgccagcctgcaggggagcaccatcatcgagctcttccacagcagcatt
gccgaggttgaaaacgaggagttgaggcacctcctgtggtcctcagtggtgttctaccag
accccggggctggaggtgaccgcctgcgtgctgctctccaccaaggctgtgtacttcgtg
ctgcacgacggcctccgccgctacttctcggagcccctgcaagatttctggcatcagaag
aacacggactacaacaacagtcccttccacatctcccagtgctttgttttaaagctcagc
gacttgcaggcagtcaacgtgggcctttttgaccagtatttccggctgacgggctcgtcg
ccgatgcaggtggtcacctgcctgacacgggacagctacctgacacactgcttcctgcag
cacctcatgggcgtgctgtcctctctcgagcgcacgccctcccccgagcctgtcgacaag
gacttctactccgagtttgggaacaagaccacagggaagctggaaaactacgagctgatc
cattcaagccgcgtcaagttcacctaccccagtgaggaggagatcggagacctgacgttc
accgtggcccagaagatggccgacccggagaaggcgccggccctcagcatcctgctgtac
gtgcaggccttccaggtgggcacaccgccccccgggcgctgcaggggcatgctgcgcccc
aagacgctcctgctcaccagcgctgagatattcctcctggacgaggacttcgttcactac
cccctgcccgagttcgccaaggagccaccgcagagggaccggtaccggctggacgacggc
cgccgcgtccgggacctggaccgcgtgctcatgggctaccagacctacccgcaggcccta
accctcgtgttcgacgacgtgcagggccacgacctcatgggcagcgtcaccctggaccac
ttcggggaagtgccgggtggttccaccagagccggccagggccgtgaggtccagtggcag
gtgttcgtgcccagcgccgagagccgcgagaagctcatctcgctcttggctcgtcagtgg
gaggccctgtgtggccgggagctgcccgtcgagctcaccggctag

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