Ailuropoda melanoleuca (giant panda): 100477892
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Entry
100477892 CDS
T01329
Symbol
VPS50
Name
(RefSeq) syndetin isoform X1
KO
K23288
syndetin
Organism
aml
Ailuropoda melanoleuca (giant panda)
Brite
KEGG Orthology (KO) [BR:
aml00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
aml04131
]
100477892 (VPS50)
Membrane trafficking [BR:
aml04131
]
Protein recycling
Others
EARP complex
100477892 (VPS50)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps54_N
Syndetin_C
SAC9_GBDL_2nd
Motif
Other DBs
NCBI-GeneID:
100477892
NCBI-ProteinID:
XP_002918285
Ensembl:
ENSAMEG00000017766
UniProt:
G1MHF9
LinkDB
All DBs
Position
1:143174820..143305896
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AA seq
963 aa
AA seq
DB search
MQKIKSLMTRQGLKSPPESLGDLSAIESLRVPGKEEFRELREQPSDPQAEQELINSIEQV
YFSTDSFDIVKYELEKLPPVLNLQELEEYRDKLKQQQAAVSKKVADLILEKQPAYVKELE
RVTSLQTGLQLAAVICTNGRRHLNIAKEGFTQASLGLLANQRKRQLLIGLLKSLRTIKTL
QRTDVRLSEMLEEEDYPGAIQLCLECQKAASTFKHYSCISELNSKLQDTLEQIEEQLDVA
LSKICKNFDINHYTKVQQAYRLLGKTQTAMDQLHMHFTQAIHNTVFQVVLGYVELCSGNT
DTKFQKLQYKDLCTHVTPDSYIPCLADLCKALWEVMLSYYRTMEWHEKHDNEDTTSASEG
SNMGTEETNFDRGYIKKKLEHGLTRIWQDVQLKVKTYLLGTDLSIFKYDDFIFVLDIISR
LMQVGEEFCGSKSEVLQESIRKQSVNYFKNYHRTRLDELRMFLENETWELCPVKSNFSIL
QLHEFKFMEQSRSPSVSPSKQPASTSSKTVTLFEQYCSDGNPFEIQANHKDEETEDVLAS
NGYESDEQEKSAYQEYDSDSDVPEELKRDYVDEQTGDAPVKSISRETLKSRKKSDYSLNK
VNAPILTNTTLNVIRLVGKYMQMMNILKPIAFDVIHFTSQLFDYYLYAIYTFFGRNDSLE
STGLGLSSSRLRTTLNRIQESLIDLEVSADPTATLTAAEERKEKVPSPHLSHLVVLTSGD
TLYGLAERVVATESLVFLAEQFEFLQPHLDAVMPAVKKPFLQQFYSQTVSTASELRKPIY
WIVAGKAIDYEQMLLLMANVKWDVKEIMSQHNIYVDALLKEFEQFNRRLNEVSKRVRIPL
PVSNILWEHCIRLANRTIVEGYANVKKCSNEGRALMQLDFQQFLMKLEKLTDIRPIPDKE
FVETYIKAYYLTENDMERWIKEHREYSTKQLTNLVNVCLGSHINKKARQKLLAAIDDIDR
PKR
NT seq
2892 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaaaatcaaatctcttatgacccgacagggtctgaagagccctccggaaagcctt
ggtgatcttagtgccattgagagtctccgggtccctggaaaggaggaatttcgagaactt
cgagaacagcctagtgaccctcaagcggaacaagaactaattaatagtattgaacaagta
tatttttctacggactcatttgatattgttaaatatgagctggagaagctccctcctgtt
ctcaatttgcaagaattagaagagtacagagacaaattgaaacaacagcaagctgcagtc
tctaaaaaagtagcagatttaatccttgaaaaacagcctgcttatgtaaaggaacttgaa
agagttacctcattacagacgggtcttcagttagctgctgttatctgcacaaatggaagg
agacacttgaatattgccaaggaaggttttactcaagctagtttaggccttcttgcaaat
caaaggaaacgtcagttgctgattggacttctgaaatctctgagaactataaaaacattg
caaagaacagatgtgcgcttaagtgaaatgctggaggaggaagactatccaggagctatt
cagttgtgtctggaatgtcagaaagctgccagcacctttaaacattacagttgcataagt
gaattgaattcaaagcttcaagatactttagaacaaattgaggaacagttggatgtagct
ctttccaaaatctgcaagaattttgatattaaccattacaccaaggttcagcaagcttat
cgacttcttggaaaaacacagacagcgatggatcaacttcacatgcatttcactcaagcc
attcataatactgtgtttcaagttgttcttggttatgtggaactatgttcaggaaacaca
gatacaaaattccaaaagctgcaatataaggatctctgtacacatgttacaccagacagc
tatattccatgccttgctgacctgtgcaaagcactgtgggaagttatgctcagctattac
aggactatggaatggcatgaaaagcatgacaatgaggatactacttctgcttctgaaggg
agtaatatgggtactgaagaaactaattttgatcgtggctacataaaaaagaaattagaa
catggacttacacgaatatggcaggatgttcagctaaaagtaaaaacctacttgcttgga
acagatttgtctatatttaaatatgatgatttcatctttgttttggatataatcagcagg
ttgatgcaagttggagaagaattttgtggtagcaaatctgaagttttgcaagagtccatt
agaaaacagagtgtcaattattttaagaactaccatagaacacggcttgatgaactgaga
atgtttctagagaatgagacctgggagctttgtcctgtgaagtcaaatttcagcatcttg
caacttcatgaatttaaattcatggaacagtctcgttccccatcagtttcacctagtaag
caaccagcttcaacatcctcaaaaacagtgaccttgtttgagcagtactgtagtgatggg
aatccatttgaaatccaggctaaccacaaagacgaagaaacagaagatgtcctggcttct
aatgggtatgaatctgatgaacaagaaaaaagtgcctatcaggagtatgacagtgacagt
gacgttcctgaggaactgaaacgagattatgtggatgagcaaacaggtgatgcacctgtg
aaaagcatttctagagaaactctaaaaagcaggaagaagtcagattatagtctaaataaa
gtgaatgcacccatcttaaccaatacaacattgaatgtaataagacttgttggtaaatat
atgcagatgatgaacattcttaaaccaattgcctttgatgttatccatttcacgtctcag
ctatttgattactacttgtatgcaatctataccttttttggtcggaatgattcactggaa
tcaacaggactaggccttagtagtagtagactaagaacaactcttaacagaattcaagag
agccttattgatttggaagtttcagctgatcctaccgccaccctcacagcagcagaagag
agaaaggagaaggtaccaagcccgcacctcagtcacctagtggttttgacatctggggat
acattatatgggctggcagaaagagtggtagccacagaatccttggtattcttggctgaa
cagtttgagttccttcagccccatctggatgccgtgatgcctgccgtcaaaaagcccttt
cttcagcagttttattctcagacagtctcaactgccagtgaactacgcaaaccaatttat
tggattgtagccggtaaagctattgattatgaacagatgctgctcctaatggctaatgtg
aagtgggacgtaaaagaaattatgtcacagcacaacatctatgtagatgcactgctaaag
gaatttgagcagtttaacaggaggttaaatgaggtttctaagagagttcggatacccctg
cccgtgtctaatatactttgggaacactgtatacgtctggccaacagaactattgtggaa
ggatatgccaacgtcaagaagtgtagtaatgagggtcgtgccttgatgcaattggatttt
caacagtttttaatgaaacttgaaaaactaacagatattagacccattcctgataaagaa
tttgtggaaacctatattaaagcctactatctgaccgagaatgacatggaacgctggatc
aaagagcacagggagtattcaacgaagcagctgaccaatctggtaaatgtttgcctggga
tcccatatcaataagaaagcaagacaaaaacttctagctgctatagatgatatagacaga
cccaaaagataa
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