KEGG   Ailuropoda melanoleuca (giant panda): 100477892
Entry
100477892         CDS       T01329                                 
Symbol
VPS50
Name
(RefSeq) syndetin isoform X1
  KO
K23288  syndetin
Organism
aml  Ailuropoda melanoleuca (giant panda)
Brite
KEGG Orthology (KO) [BR:aml00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:aml04131]
    100477892 (VPS50)
Membrane trafficking [BR:aml04131]
 Protein recycling
  Others
   EARP complex
    100477892 (VPS50)
SSDB
Motif
Pfam: Vps54_N Syndetin_C SAC9_GBDL_2nd
Other DBs
NCBI-GeneID: 100477892
NCBI-ProteinID: XP_002918285
Ensembl: ENSAMEG00000017766
UniProt: G1MHF9
LinkDB
Position
1:143174820..143305896
AA seq 963 aa
MQKIKSLMTRQGLKSPPESLGDLSAIESLRVPGKEEFRELREQPSDPQAEQELINSIEQV
YFSTDSFDIVKYELEKLPPVLNLQELEEYRDKLKQQQAAVSKKVADLILEKQPAYVKELE
RVTSLQTGLQLAAVICTNGRRHLNIAKEGFTQASLGLLANQRKRQLLIGLLKSLRTIKTL
QRTDVRLSEMLEEEDYPGAIQLCLECQKAASTFKHYSCISELNSKLQDTLEQIEEQLDVA
LSKICKNFDINHYTKVQQAYRLLGKTQTAMDQLHMHFTQAIHNTVFQVVLGYVELCSGNT
DTKFQKLQYKDLCTHVTPDSYIPCLADLCKALWEVMLSYYRTMEWHEKHDNEDTTSASEG
SNMGTEETNFDRGYIKKKLEHGLTRIWQDVQLKVKTYLLGTDLSIFKYDDFIFVLDIISR
LMQVGEEFCGSKSEVLQESIRKQSVNYFKNYHRTRLDELRMFLENETWELCPVKSNFSIL
QLHEFKFMEQSRSPSVSPSKQPASTSSKTVTLFEQYCSDGNPFEIQANHKDEETEDVLAS
NGYESDEQEKSAYQEYDSDSDVPEELKRDYVDEQTGDAPVKSISRETLKSRKKSDYSLNK
VNAPILTNTTLNVIRLVGKYMQMMNILKPIAFDVIHFTSQLFDYYLYAIYTFFGRNDSLE
STGLGLSSSRLRTTLNRIQESLIDLEVSADPTATLTAAEERKEKVPSPHLSHLVVLTSGD
TLYGLAERVVATESLVFLAEQFEFLQPHLDAVMPAVKKPFLQQFYSQTVSTASELRKPIY
WIVAGKAIDYEQMLLLMANVKWDVKEIMSQHNIYVDALLKEFEQFNRRLNEVSKRVRIPL
PVSNILWEHCIRLANRTIVEGYANVKKCSNEGRALMQLDFQQFLMKLEKLTDIRPIPDKE
FVETYIKAYYLTENDMERWIKEHREYSTKQLTNLVNVCLGSHINKKARQKLLAAIDDIDR
PKR
NT seq 2892 nt   +upstreamnt  +downstreamnt
atgcaaaaaatcaaatctcttatgacccgacagggtctgaagagccctccggaaagcctt
ggtgatcttagtgccattgagagtctccgggtccctggaaaggaggaatttcgagaactt
cgagaacagcctagtgaccctcaagcggaacaagaactaattaatagtattgaacaagta
tatttttctacggactcatttgatattgttaaatatgagctggagaagctccctcctgtt
ctcaatttgcaagaattagaagagtacagagacaaattgaaacaacagcaagctgcagtc
tctaaaaaagtagcagatttaatccttgaaaaacagcctgcttatgtaaaggaacttgaa
agagttacctcattacagacgggtcttcagttagctgctgttatctgcacaaatggaagg
agacacttgaatattgccaaggaaggttttactcaagctagtttaggccttcttgcaaat
caaaggaaacgtcagttgctgattggacttctgaaatctctgagaactataaaaacattg
caaagaacagatgtgcgcttaagtgaaatgctggaggaggaagactatccaggagctatt
cagttgtgtctggaatgtcagaaagctgccagcacctttaaacattacagttgcataagt
gaattgaattcaaagcttcaagatactttagaacaaattgaggaacagttggatgtagct
ctttccaaaatctgcaagaattttgatattaaccattacaccaaggttcagcaagcttat
cgacttcttggaaaaacacagacagcgatggatcaacttcacatgcatttcactcaagcc
attcataatactgtgtttcaagttgttcttggttatgtggaactatgttcaggaaacaca
gatacaaaattccaaaagctgcaatataaggatctctgtacacatgttacaccagacagc
tatattccatgccttgctgacctgtgcaaagcactgtgggaagttatgctcagctattac
aggactatggaatggcatgaaaagcatgacaatgaggatactacttctgcttctgaaggg
agtaatatgggtactgaagaaactaattttgatcgtggctacataaaaaagaaattagaa
catggacttacacgaatatggcaggatgttcagctaaaagtaaaaacctacttgcttgga
acagatttgtctatatttaaatatgatgatttcatctttgttttggatataatcagcagg
ttgatgcaagttggagaagaattttgtggtagcaaatctgaagttttgcaagagtccatt
agaaaacagagtgtcaattattttaagaactaccatagaacacggcttgatgaactgaga
atgtttctagagaatgagacctgggagctttgtcctgtgaagtcaaatttcagcatcttg
caacttcatgaatttaaattcatggaacagtctcgttccccatcagtttcacctagtaag
caaccagcttcaacatcctcaaaaacagtgaccttgtttgagcagtactgtagtgatggg
aatccatttgaaatccaggctaaccacaaagacgaagaaacagaagatgtcctggcttct
aatgggtatgaatctgatgaacaagaaaaaagtgcctatcaggagtatgacagtgacagt
gacgttcctgaggaactgaaacgagattatgtggatgagcaaacaggtgatgcacctgtg
aaaagcatttctagagaaactctaaaaagcaggaagaagtcagattatagtctaaataaa
gtgaatgcacccatcttaaccaatacaacattgaatgtaataagacttgttggtaaatat
atgcagatgatgaacattcttaaaccaattgcctttgatgttatccatttcacgtctcag
ctatttgattactacttgtatgcaatctataccttttttggtcggaatgattcactggaa
tcaacaggactaggccttagtagtagtagactaagaacaactcttaacagaattcaagag
agccttattgatttggaagtttcagctgatcctaccgccaccctcacagcagcagaagag
agaaaggagaaggtaccaagcccgcacctcagtcacctagtggttttgacatctggggat
acattatatgggctggcagaaagagtggtagccacagaatccttggtattcttggctgaa
cagtttgagttccttcagccccatctggatgccgtgatgcctgccgtcaaaaagcccttt
cttcagcagttttattctcagacagtctcaactgccagtgaactacgcaaaccaatttat
tggattgtagccggtaaagctattgattatgaacagatgctgctcctaatggctaatgtg
aagtgggacgtaaaagaaattatgtcacagcacaacatctatgtagatgcactgctaaag
gaatttgagcagtttaacaggaggttaaatgaggtttctaagagagttcggatacccctg
cccgtgtctaatatactttgggaacactgtatacgtctggccaacagaactattgtggaa
ggatatgccaacgtcaagaagtgtagtaatgagggtcgtgccttgatgcaattggatttt
caacagtttttaatgaaacttgaaaaactaacagatattagacccattcctgataaagaa
tttgtggaaacctatattaaagcctactatctgaccgagaatgacatggaacgctggatc
aaagagcacagggagtattcaacgaagcagctgaccaatctggtaaatgtttgcctggga
tcccatatcaataagaaagcaagacaaaaacttctagctgctatagatgatatagacaga
cccaaaagataa

DBGET integrated database retrieval system