Ailuropoda melanoleuca (giant panda): 100478104
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Entry
100478104 CDS
T01329
Symbol
SPOCK1
Name
(RefSeq) testican-1 isoform X1
KO
K08136
testican
Organism
aml
Ailuropoda melanoleuca (giant panda)
Brite
KEGG Orthology (KO) [BR:
aml00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
aml00535
]
100478104 (SPOCK1)
Proteoglycans [BR:
aml00535
]
Extracellular matrix (ECM) proteoglycans
Others
100478104 (SPOCK1)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SPARC_Ca_bdg
Thyroglobulin_1
Kazal_2
Kazal_1
Motif
Other DBs
NCBI-GeneID:
100478104
NCBI-ProteinID:
XP_034511940
Ensembl:
ENSAMEG00000016040
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All DBs
Position
3:complement(25503278..26003532)
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AA seq
441 aa
AA seq
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MPAIAVLAAAAAACFLQVESRHLDALAGGAGPNNGNFLDNDQWLSTVSQYDRDKYWNRFR
DEVEDDYFRNWNPNKPFDQALDPSKDPCLKVKCSPHKVCVTQDYQTALCVSRKHLLPRQK
KGSVAHKHWVGPSNLVKCKPCPAAQSAMVCGSDGHTYTSKCKLEFHACSTGKSLSILCDG
PCPCLPEPEPPKHKTEKNACTDKELRNLASRLKDWFGALHEDANRVIKPTISDAAQGRFD
TSILPICKDSLGWMFNKLDMNYDLLLDHSEINAIYLDKYEPCIKPLFNSCDSFKDGKLSN
NEWCYCFQKPGGLPCQNEMNRIQKLSKGKSLLGAFVPRCNEEGYYKATQCHGSTGQCWCV
DKYGNELAGSRKQGAVSCEEEQETSGDFGSGGSVVLLDDLEDERELGPKDQLGKPRVHTR
AVTEDDEDEDDDKEDEVGYIW
NT seq
1326 nt
NT seq
+upstream
nt +downstream
nt
atgccagcgatcgcggtgctggcggcggcggccgcggcgtgcttcctccaggtcgagagc
cggcacctggacgcgctggccggcggcgcgggccccaacaacggcaatttcctagacaat
gaccagtggctgagcaccgtctcccagtacgaccgggacaagtactggaaccgctttcga
gacgaagttgaggatgattatttcagaaactggaatcccaacaagccctttgaccaagcc
ctggacccatccaaagacccctgcctgaaggtgaaatgcagccctcacaaagtatgtgtg
acccaggactaccagaccgccctatgtgtcagccgcaaacacctgctgcccaggcaaaag
aaggggagtgtggcccacaagcactgggtcggaccatcgaatctggtgaagtgcaagccc
tgccccgcggcgcagtcggctatggtctgcggctccgacggccacacctacacgtccaag
tgcaagttggagttccatgcttgttccactggcaaaagcctcagcatcctctgtgacggg
ccctgtccatgtctcccggagcctgagccaccaaaacacaagacagaaaagaatgcctgc
acagataaggagttgaggaacctcgcgtcccgcctgaaagactggtttggagcccttcac
gaggatgccaacagggtcatcaagcccaccatctctgatgcagctcaaggcagatttgac
accagcatcctgcccatctgcaaggactccctgggctggatgttcaacaagttggacatg
aactatgacctcctgcttgaccactcagagatcaatgccatctacctggataagtatgag
ccctgtatcaagcctctcttcaactcctgtgactccttcaaggatggcaagctctccaac
aacgagtggtgctactgcttccagaagcctggaggtctcccttgccagaatgaaatgaac
aggattcagaagctgagcaaggggaaaagcctgttgggagcattcgtccctcggtgtaac
gaggagggctattacaaagccacgcagtgccacggcagcacggggcagtgctggtgtgtg
gataaatacggcaacgagctggccggctccaggaaacagggcgccgtgagctgtgaagag
gagcaggagacgtcaggggattttggcagtggcggctctgtggtcctgctagatgaccta
gaggacgaacgggagctgggaccaaaggaccaattggggaaaccgagggtgcacacccga
gcagtgacagaggatgatgaggatgaggacgacgacaaagaggacgaggtgggctacata
tggtag
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