Ailuropoda melanoleuca (giant panda): 100478247
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Entry
100478247 CDS
T01329
Symbol
RNF40
Name
(RefSeq) E3 ubiquitin-protein ligase BRE1B
KO
K10696
E3 ubiquitin-protein ligase BRE1 [EC:
2.3.2.27
]
Organism
aml
Ailuropoda melanoleuca (giant panda)
Brite
KEGG Orthology (KO) [BR:
aml00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
aml04121
]
100478247 (RNF40)
Enzymes [BR:
aml01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
100478247 (RNF40)
Ubiquitin system [BR:
aml04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
BRE1 proteins
100478247 (RNF40)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRE1B
CC_Bre1
zf-C3HC4
zf-C3HC4_3
BRE1
zf-C3HC4_2
EzrA
zf-RING_5
zf-RING_2
zf-RING_UBOX
zf-rbx1
ZapB
SpoIIE
Motif
Other DBs
NCBI-GeneID:
100478247
NCBI-ProteinID:
XP_002924807
Ensembl:
ENSAMEG00000007668
UniProt:
D2HQN6
LinkDB
All DBs
Position
10:complement(16059121..16071173)
Genome browser
AA seq
1001 aa
AA seq
DB search
MSGPGNKRAAGDGGSGPPEKKLSREEKTTTTLIEPIRLGGISSTEEMDLKVLQFKNKKLA
ERLEQRQACEDELRERIEKLEKRQATDDATLLIVNRYWAQLDETVEALLRHHESQGELSS
GTEAPGTQEGPTRDETPLTEPGTSELREPLPVQLRPPLSEPALAFVVALGASSSEEVELQ
LQGRMEFSKAAVSRVVEASDRLQRRVEELCQRVYSRGDSEPPGEVARARTRELGRENRRL
QDLATQLQEKHHRISLEYSELQDKVTSAETKVLEMETTVEDLQWDIEKLRKREQKLNKHL
AEALEQLNSGYYVSGSSSGFQGGQITLSMQKFEMLNAELEENQELANSRMAELEKLQAEL
QGAVRTNERLKVALRSLPEEVVRETGEYRMLQAQFSLLYNESLQVKTQLDEARGLLLATK
NSHLRHIEHMESDELGLQKKLRTEVIQLEDTLAQVRKEYEMLRIEFEQNLAANEQAGPIN
REMRHLISSLQNHNHQLKGDAQRYKRKLREVQAEIGKLRAQASGSTHSIPNLGHPEDSGL
SAPAPGKEEGGPGPVTAPDSRKEMASVPGTATTTSSAKKEELVPSEEDAQALTPGSQGPS
SRGREPEARPKRELREREGPGLGPPSVASALSRADREKAKVEEAKRKESELLKGLRAELK
KAQESQKEMKLLLDMYKSAPKEQRDKVQLMAAERKAKAEVDELRSRIRELEERDRRESKK
IADEDALRRIRQAEEQIEHLQRKLGATKQEEEALLSEMDVTGQAFEDMQEQNGRLLQQLR
EKDDANFKLMSERIKANQIHKLLREEKDELGEQVLGLKSQVDAQLLTVQKLEEKERALQG
SLGGVEKELTLRSQALELNKRKAVEAAQLAEDLKVQLEHVQTRLREIQPCLAESRAAREK
ESFNLKRAQEDISRLRRKLEKQRKVEVYADADEILQEEIKEYKARLTCPCCNTRKKDAVL
TKCFHVFCFECVRGRYEARQRKCPKCNAAFGAHDFHRVYIS
NT seq
3006 nt
NT seq
+upstream
nt +downstream
nt
atgtctggacccggcaacaaacgcgcagccggcgacgggggctcagggcccccagagaag
aagctgagccgcgaggagaagaccacgaccacgcttatagagcccattcgtcttgggggc
atctcttccacggaggagatggacctgaaggttctgcagttcaagaacaagaaactagca
gagcggttggaacagcgacaggcttgcgaagatgagctccgagagcgaattgagaagctg
gagaagcgtcaggccacagatgatgccacactcctcattgtcaatcgctactgggcccag
ctggatgaaactgtggaagcccttctccgacaccatgagagccagggggagctgtcttca
gggacagaggcgcctgggacccaggaggggccgacacgtgatgagacccctctcacagag
ccagggacatcggagctgagggagcccctgccagtgcagctgcggcccccgctcagtgag
ccagccttggcttttgtggtagcactgggcgccagcagtagtgaggaggtggagctgcag
ctgcagggccgaatggagttctccaaggctgccgtgtcccgtgtggtagaggcctcagac
cgcctgcagcgccgggtggaggaactctgtcagcgagtgtacagccgaggggacagtgag
ccccccggtgaggtggctcgggcacgcacccgggagttgggtcgtgagaaccggcggctg
caggacttggctacccagctacaagagaagcaccaccgcatctcgttggagtactctgag
ctccaggataaagtaacatcagcagagaccaaggtgctggagatggagacgacggtggag
gacctgcagtgggacattgagaagctgcgcaagcgtgagcagaagctcaataagcacctg
gcggaggccttggagcagctcaactctggctactatgtgtctgggagctcctctggcttc
caggggggccagatcacactcagcatgcagaagtttgagatgctgaatgcagagttggag
gaaaaccaggaattggccaatagccgtatggcagagctggagaagctgcaggccgaactt
cagggggctgtgcggaccaatgagcgcctcaaggtggccctgcggagccttcctgaggag
gtggtgcgggaaacgggggagtaccgaatgctgcaggcccagttctcgctgctctacaac
gagtctctgcaagtgaagacccagcttgatgaggcccgggggctgctgctggccaccaag
aattcccacctgagacacattgagcacatggagagcgatgagctggggctgcagaagaag
ctgcgcacagaggttatccagctggaggacacgctggcgcaggtacgcaaggagtacgag
atgctgcgcatcgagtttgaacagaacctggcggccaacgagcaggcagggcccatcaac
cgtgagatgcgccacctgatcagcagcctccaaaaccacaaccaccagctaaagggggat
gcccagcggtacaagcggaagctgcgggaggtgcaggcggagattggcaagctccgggcc
caggccagtggctcaacccactccatccccaacctgggccacccagaggactctggcctc
agcgccccagccccagggaaagaagagggtgggccaggccctgtcactgcccccgacagc
agaaaggagatggcttcggtgcctggcaccgccacgactacctcctcagcgaagaaggag
gagctggtcccctctgaggaggatgcccaggccctaactcctgggtcccagggcccctcc
tcccggggtcgagaacctgaggccaggcccaagcgggagcttcgagagcgggaagggcct
ggcctgggacccccatctgtagcctcagctctctcaagggctgatcgggagaaggccaag
gtggaggaggccaagaggaaggagtcagaactcctcaaaggtctccgagcagagctcaag
aaggcccaggaaagccagaaggagatgaagctgctgctggacatgtacaagtcagcaccc
aaggagcagcgggataaggtgcagctcatggcagcagagcgcaaggccaaggctgaggtt
gatgaactacggagccgtatccgggaattggaggagagggacaggagggagagcaaaaaa
attgcggatgaggacgccctgcggcgcattcggcaggcggaggagcagatcgaacacctg
cagcgcaagttgggcgccaccaagcaggaagaggaggctctgctgtcagagatggatgta
accggtcaggctttcgaagacatgcaggagcagaacgggcggctgctgcagcagttacgg
gaaaaggatgatgccaactttaagctgatgtcagagcggatcaaggccaaccagatccac
aagctgctgcgggaagagaaggatgagctgggcgagcaagtgctgggcctgaagtcccag
gtggatgcccagctgctgaccgtgcagaagctggaggaaaaagagcgggccttgcagggc
agcctcgggggcgtggagaaggagctgacgctgcgcagccaggccctggagctcaacaag
aggaaggctgtggaagcggcccagctggctgaggatctaaaggtacagctggagcatgtg
cagacacggctgcgagagatccagccttgcctggcagagagccgggctgctcgagagaaa
gagagcttcaacctcaagagggctcaggaggacatctcacggctgcggcgcaagctggag
aagcagaggaaggtggaggtttatgcagatgccgatgaaatcctccaggaggagatcaag
gagtacaaggcgcggttgacctgcccctgctgtaacacccgcaagaaggatgcagtcctt
accaagtgcttccacgttttctgcttcgagtgcgtgcggggccgctatgaggcccgccag
aggaagtgccccaagtgcaacgcggcctttggtgcccacgacttccaccgcgtctacatc
agctga
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integrated database retrieval system
