Ailuropoda melanoleuca (giant panda): 100478420
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Entry
100478420 CDS
T01329
Name
(RefSeq) LOW QUALITY PROTEIN: stromelysin-1
KO
K01394
matrix metalloproteinase-3 (stromelysin 1, progelatinase) [EC:
3.4.24.17
]
Organism
aml
Ailuropoda melanoleuca (giant panda)
Pathway
aml04657
IL-17 signaling pathway
aml04668
TNF signaling pathway
aml05171
Coronavirus disease - COVID-19
aml05202
Transcriptional misregulation in cancer
aml05215
Prostate cancer
aml05323
Rheumatoid arthritis
aml05417
Lipid and atherosclerosis
Brite
KEGG Orthology (KO) [BR:
aml00001
]
09130 Environmental Information Processing
09132 Signal transduction
04668 TNF signaling pathway
100478420
09150 Organismal Systems
09151 Immune system
04657 IL-17 signaling pathway
100478420
09160 Human Diseases
09161 Cancer: overview
05202 Transcriptional misregulation in cancer
100478420
09162 Cancer: specific types
05215 Prostate cancer
100478420
09172 Infectious disease: viral
05171 Coronavirus disease - COVID-19
100478420
09163 Immune disease
05323 Rheumatoid arthritis
100478420
09166 Cardiovascular disease
05417 Lipid and atherosclerosis
100478420
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
aml01002
]
100478420
Enzymes [BR:
aml01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.24 Metalloendopeptidases
3.4.24.17 stromelysin 1
100478420
Peptidases and inhibitors [BR:
aml01002
]
Metallo peptidases
Family M10
100478420
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Peptidase_M10
Hemopexin
PG_binding_1
Astacin
Reprolysin_3
Reprolysin_5
DUF4953
Reprolysin_4
Motif
Other DBs
NCBI-GeneID:
100478420
NCBI-ProteinID:
XP_002922061
Ensembl:
ENSAMEG00000010203
LinkDB
All DBs
Position
8:complement(996240..1004292)
Genome browser
AA seq
476 aa
AA seq
DB search
MQNLPALLSLCVAVCSAYPVDRASEDEDSMELVQQYLENYYNLAKDTKPFVRRRDGGPVV
EKLREMQKFLGLEVTGKLDSDTLEMMHKPRCGVPDVGDFTTFPGMPKWRKTHLTYRIMNY
MLDLPRDAVDSAIEKALSLWEEVTPLTFSKADDGEADIKILFAVRDHGDFIPFDGPGKVL
AHAYPPGPGIYGDAHFDDDEPWTRDTSGTNLFLVAAHELGHSLGLFHSADPRALMYPVYN
ARTDLARLRLSQDDVAGIQSLYGSPSVSPDDPAVPPESVPPGPETPAACDPSLSFDAIST
LRGEILFFKDRHFWRKSLRTLEPGFYLISSFWPSLPSGLDAAYEETSKDIVFVFKGNQFW
AIRGTEAQAGYPKSIHTXGFPSTVRKIDAAIFDKEKKKTYFFVGDKYWRFDERRRSMEPG
FPRQIAEDFPGVDPKVDAAFEAFGFYYFFNGSSQLEFDPNAREVTHSLKSNSWLNC
NT seq
1431 nt
NT seq
+upstream
nt +downstream
nt
atgcagaaccttccagctctgctgtctctctgtgtggctgtgtgctcggcctacccagtg
gacagagcctcggaggatgaggacagcatggaacttgtgcagcaatacctggaaaattac
tacaaccttgcaaaagataccaaaccatttgttagaagaagggacggtggtcctgttgtt
gaaaaactccgagaaatgcagaagttcctcgggctggaggtgacggggaagctggactcg
gacactctggagatgatgcacaagcccaggtgtggggtccccgatgtcggcgacttcacc
accttccctggcatgccgaagtggaggaaaacacaccttacttacaggattatgaattat
atgctggatttgccaagagacgctgttgattctgccattgagaaagctctgagcctctgg
gaggaggtgactccactgactttctccaaggctgacgacggagaggctgacataaagatc
ttatttgcagttagagatcatggagactttatcccctttgatggacctggaaaagttctg
gctcatgcctacccgcccgggcccggcatttacggagatgcgcactttgacgatgacgag
ccatggacgagggatacttccggaaccaatttattcctggttgccgctcatgaacttggc
cattccctgggtctcttccactcggccgaccctcgcgccctgatgtacccggtctacaac
gcgcgcacagacctggcccgcctccgcctttctcaagatgacgtggctggcatccagtcc
ctgtacggatctccctctgtctccccggatgaccccgcggtgcccccggaatctgtgcct
ccaggacccgagaccccagccgcgtgcgaccccagtttgtccttcgacgcaatcagcact
ctgaggggagaaatcctgttcttcaaagacaggcatttttggcgcaaatccctcaggacg
cttgaacctggattttacctgatctcctcgttttggccctcccttccttcaggcctggat
gctgcatatgaagaaactagcaaggacattgttttcgtttttaaaggaaatcagttctgg
gccatcagaggaactgaggcacaagctggttatccaaaaagcatccacactnccggtttt
ccctcaaccgtaaggaaaattgatgcagccatttttgataaggaaaagaagaaaacgtac
ttctttgtaggagacaaatactggcgatttgatgagaggagacgatccatggagccaggc
ttccccaggcaaatagcagaagacttcccaggggttgaccccaaggtcgatgctgctttt
gaagcatttgggttttactatttcttcaatggatcttcacagctggagtttgacccaaat
gctagggaagtgacacattccttgaagagcaacagctggttgaattgctga
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